RNA–Protein interactions for RNA: ENST00000426882.5

HCG18-235, Transcript of HLA complex group 18, humanhuman

TSL 1 (best) BASIC

Gene HCG18, Length 4,862 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-235ENST00000426882 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.16■□□□□ 0.98
HCG18-235ENST00000426882 RPF1Q9H9Y2 349 aaKnown RBP21.16■□□□□ 0.98
HCG18-235ENST00000426882 SUGT1Q9Y2Z0 365 aa21.16■□□□□ 0.98
HCG18-235ENST00000426882 GRID2IPA4D2P6 1211 aa21.16■□□□□ 0.98
HCG18-235ENST00000426882 PRPSAP2O60256 369 aa21.16■□□□□ 0.98
HCG18-235ENST00000426882 ABL1P00519 1130 aa21.16■□□□□ 0.98
HCG18-235ENST00000426882 RPS6KA2Q15349 733 aa21.16■□□□□ 0.98
HCG18-235ENST00000426882 MAP3K21Q5TCX8 1036 aa21.16■□□□□ 0.98
HCG18-235ENST00000426882 NLRP7Q8WX94 980 aa21.16■□□□□ 0.98
HCG18-235ENST00000426882 DDX23Q9BUQ8 820 aaKnown RBP21.16■□□□□ 0.98
HCG18-235ENST00000426882 SNX25Q9H3E2 840 aa21.16■□□□□ 0.98
HCG18-235ENST00000426882 RGL1Q9NZL6 768 aa21.16■□□□□ 0.98
HCG18-235ENST00000426882 COL3A1P02461 1466 aaPredicted RBP21.16■□□□□ 0.98
HCG18-235ENST00000426882 FTLP02792 175 aaPredicted RBP21.16■□□□□ 0.98
HCG18-235ENST00000426882 RASA1P20936 1047 aa21.16■□□□□ 0.98
HCG18-235ENST00000426882 OSBPP22059 807 aa21.16■□□□□ 0.98
HCG18-235ENST00000426882 FRMD5Q7Z6J6 570 aa21.16■□□□□ 0.98
HCG18-235ENST00000426882 PDIK1LQ8N165 341 aa21.16■□□□□ 0.98
HCG18-235ENST00000426882 COG1Q8WTW3 980 aa21.16■□□□□ 0.98
HCG18-235ENST00000426882 TMEM60Q9H2L4 133 aa21.16■□□□□ 0.98
HCG18-235ENST00000426882 STXBP3O00186 592 aa21.16■□□□□ 0.98
HCG18-235ENST00000426882 SLC38A10Q9HBR0 1119 aa21.16■□□□□ 0.98
HCG18-235ENST00000426882 KIAA1586Q9HCI6 787 aa21.16■□□□□ 0.98
HCG18-235ENST00000426882 SNX12Q9UMY4 172 aa21.16■□□□□ 0.98
HCG18-235ENST00000426882 DALRD3Q5D0E6 543 aaKnown RBP21.15■□□□□ 0.98
HCG18-235ENST00000426882 HEXIM2Q96MH2 286 aaKnown RBP21.15■□□□□ 0.98
HCG18-235ENST00000426882 RNF146Q9NTX7 359 aa21.15■□□□□ 0.98
HCG18-235ENST00000426882 NPHP3-ACAD11A0A0J9YXS1 232 aa21.15■□□□□ 0.98
HCG18-235ENST00000426882 EVI5O60447 810 aa21.15■□□□□ 0.98
HCG18-235ENST00000426882 EYA4O95677 639 aa21.15■□□□□ 0.98
HCG18-235ENST00000426882 CNGA1P29973 690 aa21.15■□□□□ 0.98
HCG18-235ENST00000426882 PASD1Q8IV76 773 aa21.15■□□□□ 0.98
HCG18-235ENST00000426882 AGLP35573 1532 aa21.15■□□□□ 0.98
HCG18-235ENST00000426882 FRMPD1Q5SYB0 1578 aa21.15■□□□□ 0.98
HCG18-235ENST00000426882 MYMKA6NI61 221 aa21.15■□□□□ 0.98
HCG18-235ENST00000426882 PDXKO00764 312 aa21.15■□□□□ 0.98
HCG18-235ENST00000426882 CLDN3O15551 220 aa21.15■□□□□ 0.98
HCG18-235ENST00000426882 ARL4AP40617 200 aa21.15■□□□□ 0.98
HCG18-235ENST00000426882 E2F5Q15329 346 aa21.15■□□□□ 0.98
HCG18-235ENST00000426882 NUGGCQ68CJ6 796 aa21.15■□□□□ 0.98
HCG18-235ENST00000426882 CENPUQ71F23 418 aa21.15■□□□□ 0.98
HCG18-235ENST00000426882 SCYL3Q8IZE3 742 aa21.15■□□□□ 0.98
HCG18-235ENST00000426882 C11orf70Q9BRQ4 267 aa21.15■□□□□ 0.98
HCG18-235ENST00000426882 SH3BP5O60239 455 aa21.15■□□□□ 0.98
HCG18-235ENST00000426882 SNRNP48Q6IEG0 339 aaKnown RBP21.15■□□□□ 0.98
HCG18-235ENST00000426882 MARCH10Q8NA82 808 aaPredicted RBP21.15■□□□□ 0.98
HCG18-235ENST00000426882 PRPF38AQ8NAV1 312 aaKnown RBP21.15■□□□□ 0.98
HCG18-235ENST00000426882 ZWILCHQ9H900 591 aa21.15■□□□□ 0.98
HCG18-235ENST00000426882 UBE2Q2LH0YL09 131 aa21.14■□□□□ 0.98
HCG18-235ENST00000426882 ITPK1Q13572 414 aa21.14■□□□□ 0.98
HCG18-235ENST00000426882 RCN2Q14257 317 aa21.14■□□□□ 0.98
HCG18-235ENST00000426882 PTPAQ15257 358 aa21.14■□□□□ 0.98
HCG18-235ENST00000426882 HIBCHQ6NVY1 386 aaPredicted RBP21.14■□□□□ 0.98
HCG18-235ENST00000426882 TMEM270Q6UE05 265 aa21.14■□□□□ 0.98
HCG18-235ENST00000426882 GIMAP8Q8ND71 665 aaPredicted RBP21.14■□□□□ 0.98
HCG18-235ENST00000426882 PYROXD1Q8WU10 500 aa21.14■□□□□ 0.98
HCG18-235ENST00000426882 ACTR5Q9H9F9 607 aaPredicted RBP21.14■□□□□ 0.98
HCG18-235ENST00000426882 AFF2P51816 1311 aa21.14■□□□□ 0.98
HCG18-235ENST00000426882 PSMA2P25787 234 aa21.14■□□□□ 0.97
HCG18-235ENST00000426882 NMT1P30419 496 aaKnown RBP21.14■□□□□ 0.97
HCG18-235ENST00000426882 RNASELQ05823 741 aaKnown RBP21.14■□□□□ 0.97
HCG18-235ENST00000426882 TROAPQ12815 778 aa21.14■□□□□ 0.97
HCG18-235ENST00000426882 MYO1EQ12965 1108 aa21.14■□□□□ 0.97
HCG18-235ENST00000426882 TMEM35BQ8NCS4 154 aa21.14■□□□□ 0.97
HCG18-235ENST00000426882 ZNF564Q8TBZ8 553 aaPredicted RBP21.14■□□□□ 0.97
HCG18-235ENST00000426882 TAF1DQ9H5J8 278 aaPredicted RBP21.14■□□□□ 0.97
HCG18-235ENST00000426882 PDS5AQ29RF7 1337 aaKnown RBP21.14■□□□□ 0.97
HCG18-235ENST00000426882 MYO1CO00159 1063 aa21.14■□□□□ 0.97
HCG18-235ENST00000426882 GYPCP04921 128 aa21.14■□□□□ 0.97
HCG18-235ENST00000426882 ZNF667Q5HYK9 610 aa21.14■□□□□ 0.97
HCG18-235ENST00000426882 TRIM42Q8IWZ5 723 aa21.14■□□□□ 0.97
HCG18-235ENST00000426882 NSUN6Q8TEA1 469 aaKnown RBP21.14■□□□□ 0.97
HCG18-235ENST00000426882 CEP55Q53EZ4 464 aa21.13■□□□□ 0.97
HCG18-235ENST00000426882 SAAL1Q96ER3 474 aa21.13■□□□□ 0.97
HCG18-235ENST00000426882 NOC2LQ9Y3T9 749 aaKnown RBP21.13■□□□□ 0.97
HCG18-235ENST00000426882 ZNF185O15231 689 aa21.13■□□□□ 0.97
HCG18-235ENST00000426882 TJP3O95049 919 aa21.13■□□□□ 0.97
HCG18-235ENST00000426882 MMEP08473 750 aa21.13■□□□□ 0.97
HCG18-235ENST00000426882 STXBP2Q15833 593 aa21.13■□□□□ 0.97
HCG18-235ENST00000426882 PRR5LQ6MZQ0 368 aa21.13■□□□□ 0.97
HCG18-235ENST00000426882 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.13■□□□□ 0.97
HCG18-235ENST00000426882 EMSYQ7Z589 1322 aa21.13■□□□□ 0.97
HCG18-235ENST00000426882 TARSL2A2RTX5 802 aaKnown RBP21.13■□□□□ 0.97
HCG18-235ENST00000426882 SFNP31947 248 aa21.13■□□□□ 0.97
HCG18-235ENST00000426882 ECE1P42892 770 aa21.13■□□□□ 0.97
HCG18-235ENST00000426882 KRT39Q6A163 491 aa21.13■□□□□ 0.97
HCG18-235ENST00000426882 RFFLQ8WZ73 363 aa21.13■□□□□ 0.97
HCG18-235ENST00000426882 ELAC2Q9BQ52 826 aaKnown RBP21.13■□□□□ 0.97
HCG18-235ENST00000426882 NUP85Q9BW27 656 aa21.13■□□□□ 0.97
HCG18-235ENST00000426882 GABBR1Q9UBS5 961 aa21.13■□□□□ 0.97
HCG18-235ENST00000426882 TRIM10Q9UDY6 481 aa21.13■□□□□ 0.97
HCG18-235ENST00000426882 ZHX2Q9Y6X8 837 aa21.13■□□□□ 0.97
HCG18-235ENST00000426882 WDR91A4D1P6 747 aa21.13■□□□□ 0.97
HCG18-235ENST00000426882 SOX5P35711 763 aa21.13■□□□□ 0.97
HCG18-235ENST00000426882 SPP2Q13103 211 aa21.13■□□□□ 0.97
HCG18-235ENST00000426882 EPHA7Q15375 998 aa21.13■□□□□ 0.97
HCG18-235ENST00000426882 RC3H1Q5TC82 1133 aaKnown RBP21.13■□□□□ 0.97
HCG18-235ENST00000426882 LRRC1Q9BTT6 524 aa21.13■□□□□ 0.97
HCG18-235ENST00000426882 MAGOHP61326 146 aaKnown RBP21.12■□□□□ 0.97
HCG18-235ENST00000426882 IRX4P78413 519 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 396.8 ms