RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 SCN4BQ8IWT1 228 aa19.19■□□□□ 0.66
ARHGEF28-203ENST00000426542 GIMAP8Q8ND71 665 aaPredicted RBP19.19■□□□□ 0.66
ARHGEF28-203ENST00000426542 HIPK4Q8NE63 616 aa19.19■□□□□ 0.66
ARHGEF28-203ENST00000426542 PDCD6IPQ8WUM4 868 aaKnown RBP19.19■□□□□ 0.66
ARHGEF28-203ENST00000426542 SNX19Q92543 992 aa19.19■□□□□ 0.66
ARHGEF28-203ENST00000426542 NFKBIAP25963 317 aa19.19■□□□□ 0.66
ARHGEF28-203ENST00000426542 GFPT1Q06210 699 aaPredicted RBP19.19■□□□□ 0.66
ARHGEF28-203ENST00000426542 CYB5R4Q7L1T6 521 aa19.19■□□□□ 0.66
ARHGEF28-203ENST00000426542 MORC4Q8TE76 937 aa19.19■□□□□ 0.66
ARHGEF28-203ENST00000426542 CPVLQ9H3G5 476 aa19.19■□□□□ 0.66
ARHGEF28-203ENST00000426542 SPARCL1Q14515 664 aa19.19■□□□□ 0.66
ARHGEF28-203ENST00000426542 SZRD1Q7Z422 152 aa19.19■□□□□ 0.66
ARHGEF28-203ENST00000426542 FAM167AQ96KS9 214 aa19.19■□□□□ 0.66
ARHGEF28-203ENST00000426542 PITPNM3Q9BZ71 974 aa19.19■□□□□ 0.66
ARHGEF28-203ENST00000426542 SYNGAP1Q96PV0 1343 aa19.19■□□□□ 0.66
ARHGEF28-203ENST00000426542 HNRNPCL2B2RXH8 293 aa19.19■□□□□ 0.66
ARHGEF28-203ENST00000426542 E9PMD0 336 aa19.19■□□□□ 0.66
ARHGEF28-203ENST00000426542 HNRNPCL1O60812 293 aaKnown RBP19.19■□□□□ 0.66
ARHGEF28-203ENST00000426542 MMP10P09238 476 aa19.19■□□□□ 0.66
ARHGEF28-203ENST00000426542 GPC5P78333 572 aa19.19■□□□□ 0.66
ARHGEF28-203ENST00000426542 ELMSAN1Q6PJG2 1045 aa19.19■□□□□ 0.66
ARHGEF28-203ENST00000426542 SYT2Q8N9I0 419 aaPredicted RBP19.19■□□□□ 0.66
ARHGEF28-203ENST00000426542 MYCBPQ99417 103 aaPredicted RBP19.19■□□□□ 0.66
ARHGEF28-203ENST00000426542 ESRRBO95718 433 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 PHKA2P46019 1235 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 TMEM47Q9BQJ4 181 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 UBE4BO95155 1302 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 UNC13AQ9UPW8 1703 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 NEO1Q92859 1461 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 F5H423 210 aaPredicted RBP19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 CCDC188H7C350 402 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 GNAT1P11488 350 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 EEF1DP29692 281 aaKnown RBP19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 HIBCHQ6NVY1 386 aaPredicted RBP19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 TMEM35BQ8NCS4 154 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 SUN2Q9UH99 717 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 LRRC53A6NM62 1247 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 H7C1W4 665 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 CREB3O43889 395 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 SKIP12755 728 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 GUCY2CP25092 1073 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 GRAMD1BQ3KR37 738 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 C1orf228Q6PIY5 440 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 ABHD10Q9NUJ1 306 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 USP17L15C9J2P7 530 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 USP17L13C9JLJ4 530 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 USP17L11C9JVI0 530 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 USP17L18D6R9N7 530 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 USP17L22D6RA61 530 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 USP17L17D6RBQ6 530 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 USP17L19D6RCP7 530 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 USP17L20D6RJB6 530 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 H3BRJ5 948 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 NMT2O60551 498 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 USP17L24Q0WX57 530 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 COASYQ13057 564 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 USP17L6PQ6QN14 398 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 TRIM59Q8IWR1 403 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 XXYLT1Q8NBI6 393 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 MCPH1Q8NEM0 835 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 EDEM3Q9BZQ6 932 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 TMEM260Q9NX78 707 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 A0A087WUV0 522 aaPredicted RBP19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 HUS1O60921 280 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 KIAA1755Q5JYT7 1200 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 SIRT2Q8IXJ6 389 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 CEP19Q96LK0 163 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 KIAA1586Q9HCI6 787 aa19.18■□□□□ 0.66
ARHGEF28-203ENST00000426542 USP17L10C9JJH3 530 aa19.17■□□□□ 0.66
ARHGEF28-203ENST00000426542 KITP10721 976 aa19.17■□□□□ 0.66
ARHGEF28-203ENST00000426542 TWF2Q6IBS0 349 aaKnown RBP19.17■□□□□ 0.66
ARHGEF28-203ENST00000426542 SNRNP48Q6IEG0 339 aaKnown RBP19.17■□□□□ 0.66
ARHGEF28-203ENST00000426542 TOPORSQ9NS56 1045 aaPredicted RBP19.17■□□□□ 0.66
ARHGEF28-203ENST00000426542 FGFR1OP2Q9NVK5 253 aa19.17■□□□□ 0.66
ARHGEF28-203ENST00000426542 PPARGC1AQ9UBK2 798 aaKnown RBP19.17■□□□□ 0.66
ARHGEF28-203ENST00000426542 MMEP08473 750 aa19.17■□□□□ 0.66
ARHGEF28-203ENST00000426542 TMEM259Q4ZIN3 620 aa19.17■□□□□ 0.66
ARHGEF28-203ENST00000426542 POLD4Q9HCU8 107 aa19.17■□□□□ 0.66
ARHGEF28-203ENST00000426542 GTSE1Q9NYZ3 720 aa19.17■□□□□ 0.66
ARHGEF28-203ENST00000426542 SCHIP1Q9P0W5 487 aaPredicted RBP19.17■□□□□ 0.66
ARHGEF28-203ENST00000426542 ZRANB2O95218 330 aaKnown RBP eCLIP19.17■□□□□ 0.66
ARHGEF28-203ENST00000426542 HADHAP40939 763 aa19.17■□□□□ 0.66
ARHGEF28-203ENST00000426542 TOB2Q14106 344 aaPredicted RBP19.17■□□□□ 0.66
ARHGEF28-203ENST00000426542 EMBQ6PCB8 327 aa19.17■□□□□ 0.66
ARHGEF28-203ENST00000426542 TDRD3Q9H7E2 651 aaKnown RBP19.17■□□□□ 0.66
ARHGEF28-203ENST00000426542 ZNF302Q9NR11 478 aa19.17■□□□□ 0.66
ARHGEF28-203ENST00000426542 HOXC10Q9NYD6 342 aa19.17■□□□□ 0.66
ARHGEF28-203ENST00000426542 ZHX2Q9Y6X8 837 aa19.17■□□□□ 0.66
ARHGEF28-203ENST00000426542 TMEM247A6NEH6 219 aa19.17■□□□□ 0.66
ARHGEF28-203ENST00000426542 DCTN3O75935 186 aa19.17■□□□□ 0.66
ARHGEF28-203ENST00000426542 ARID5BQ14865 1188 aa19.17■□□□□ 0.66
ARHGEF28-203ENST00000426542 KRT39Q6A163 491 aa19.17■□□□□ 0.66
ARHGEF28-203ENST00000426542 NRBF2Q96F24 287 aa19.17■□□□□ 0.66
ARHGEF28-203ENST00000426542 HPCAL4Q9UM19 191 aa19.17■□□□□ 0.66
ARHGEF28-203ENST00000426542 CALB1P05937 261 aa19.17■□□□□ 0.66
ARHGEF28-203ENST00000426542 RECQLP46063 649 aaPredicted RBP19.17■□□□□ 0.66
ARHGEF28-203ENST00000426542 TSPY1Q01534 308 aa19.17■□□□□ 0.66
ARHGEF28-203ENST00000426542 RPAINQ86UA6 219 aa19.17■□□□□ 0.66
ARHGEF28-203ENST00000426542 UGGT1Q9NYU2 1555 aa19.17■□□□□ 0.66
ARHGEF28-203ENST00000426542 DENND3A2RUS2 1198 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms