RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 KCNH1O95259 989 aa4.35□□□□□ -1.71
SF3B1-205ENST00000424674 ASGR2P07307 311 aa4.35□□□□□ -1.71
SF3B1-205ENST00000424674 NAT2P11245 290 aa4.35□□□□□ -1.71
SF3B1-205ENST00000424674 ATF2P15336 505 aa4.35□□□□□ -1.71
SF3B1-205ENST00000424674 ZKSCAN1P17029 563 aaPredicted RBP4.35□□□□□ -1.71
SF3B1-205ENST00000424674 SDSP20132 328 aa4.35□□□□□ -1.71
SF3B1-205ENST00000424674 LPOP22079 712 aaPredicted RBP4.35□□□□□ -1.71
SF3B1-205ENST00000424674 FLT3P36888 993 aa4.35□□□□□ -1.71
SF3B1-205ENST00000424674 MC3RP41968 323 aa4.35□□□□□ -1.71
SF3B1-205ENST00000424674 MAPK9P45984 424 aa4.35□□□□□ -1.71
SF3B1-205ENST00000424674 RECQLP46063 649 aaPredicted RBP4.35□□□□□ -1.71
SF3B1-205ENST00000424674 ZNF143P52747 638 aaPredicted RBP4.35□□□□□ -1.71
SF3B1-205ENST00000424674 ZBED6P86452 979 aa4.35□□□□□ -1.71
SF3B1-205ENST00000424674 VWA3BQ502W6 1294 aa4.35□□□□□ -1.71
SF3B1-205ENST00000424674 ARMC3Q5W041 872 aa4.35□□□□□ -1.71
SF3B1-205ENST00000424674 ERICH6BQ5W0A0 696 aa4.35□□□□□ -1.71
SF3B1-205ENST00000424674 FAAH2Q6GMR7 532 aa4.35□□□□□ -1.71
SF3B1-205ENST00000424674 EPM2AIP1Q7L775 607 aaPredicted RBP4.35□□□□□ -1.71
SF3B1-205ENST00000424674 OTOP3Q7RTS5 596 aa4.35□□□□□ -1.71
SF3B1-205ENST00000424674 CATIPQ7Z7H3 387 aa4.35□□□□□ -1.71
SF3B1-205ENST00000424674 LCA5Q86VQ0 697 aa4.35□□□□□ -1.71
SF3B1-205ENST00000424674 CPNE8Q86YQ8 564 aa4.35□□□□□ -1.71
SF3B1-205ENST00000424674 CPA6Q8N4T0 437 aa4.35□□□□□ -1.71
SF3B1-205ENST00000424674 ZNF513Q8N8E2 541 aaPredicted RBP4.35□□□□□ -1.71
SF3B1-205ENST00000424674 PARD3BQ8TEW8 1205 aa4.35□□□□□ -1.71
SF3B1-205ENST00000424674 FNIP1Q8TF40 1166 aa4.35□□□□□ -1.71
SF3B1-205ENST00000424674 NUP133Q8WUM0 1156 aa4.35□□□□□ -1.71
SF3B1-205ENST00000424674 CCDC47Q96A33 483 aaKnown RBP4.35□□□□□ -1.71
SF3B1-205ENST00000424674 PEX11GQ96HA9 241 aa4.35□□□□□ -1.71
SF3B1-205ENST00000424674 EXOC2Q96KP1 924 aa4.35□□□□□ -1.71
SF3B1-205ENST00000424674 TEPSINQ96N21 525 aa4.35□□□□□ -1.71
SF3B1-205ENST00000424674 CLUHP3Q96NS8 147 aa4.35□□□□□ -1.71
SF3B1-205ENST00000424674 NUP88Q99567 741 aaPredicted RBP4.35□□□□□ -1.71
SF3B1-205ENST00000424674 AP1M1Q9BXS5 423 aa4.35□□□□□ -1.71
SF3B1-205ENST00000424674 OSBPL5Q9H0X9 879 aaPredicted RBP4.35□□□□□ -1.71
SF3B1-205ENST00000424674 RXFP1Q9HBX9 757 aa4.35□□□□□ -1.71
SF3B1-205ENST00000424674 GPRC5CQ9NQ84 441 aa4.35□□□□□ -1.71
SF3B1-205ENST00000424674 ARHGAP28Q9P2N2 729 aa4.35□□□□□ -1.71
SF3B1-205ENST00000424674 GULP1Q9UBP9 304 aa4.35□□□□□ -1.71
SF3B1-205ENST00000424674 SAP30BPQ9UHR5 308 aaKnown RBP4.35□□□□□ -1.71
SF3B1-205ENST00000424674 ZBTB21Q9ULJ3 1066 aa4.35□□□□□ -1.71
SF3B1-205ENST00000424674 LRRFIP2Q9Y608 721 aaKnown RBP4.35□□□□□ -1.71
SF3B1-205ENST00000424674 TRBV23-1A0A0A0MS06 115 aa4.34□□□□□ -1.71
SF3B1-205ENST00000424674 TRAV20A0A0B4J274 112 aa4.34□□□□□ -1.71
SF3B1-205ENST00000424674 K7ESF4 209 aa4.34□□□□□ -1.71
SF3B1-205ENST00000424674 NPHS1O60500 1241 aa4.34□□□□□ -1.71
SF3B1-205ENST00000424674 PYGMP11217 842 aa4.34□□□□□ -1.71
SF3B1-205ENST00000424674 HSPA6P17066 643 aa4.34□□□□□ -1.71
SF3B1-205ENST00000424674 RPS6KB1P23443 525 aa4.34□□□□□ -1.71
SF3B1-205ENST00000424674 PSMA3P25788 255 aa4.34□□□□□ -1.71
SF3B1-205ENST00000424674 PEX19P40855 299 aa4.34□□□□□ -1.71
SF3B1-205ENST00000424674 PIK3CAP42336 1068 aa4.34□□□□□ -1.71
SF3B1-205ENST00000424674 ECE1P42892 770 aa4.34□□□□□ -1.71
SF3B1-205ENST00000424674 KCNC1P48547 511 aa4.34□□□□□ -1.71
SF3B1-205ENST00000424674 NEK4P51957 841 aa4.34□□□□□ -1.71
SF3B1-205ENST00000424674 PSMC1P62191 440 aaKnown RBP4.34□□□□□ -1.71
SF3B1-205ENST00000424674 HTRA3P83110 453 aa4.34□□□□□ -1.71
SF3B1-205ENST00000424674 NEXNQ0ZGT2 675 aa4.34□□□□□ -1.71
SF3B1-205ENST00000424674 SCRN1Q12765 414 aa4.34□□□□□ -1.71
SF3B1-205ENST00000424674 FAPQ12884 760 aa4.34□□□□□ -1.71
SF3B1-205ENST00000424674 ABCB5Q2M3G0 1257 aa4.34□□□□□ -1.71
SF3B1-205ENST00000424674 SV2CQ496J9 727 aa4.34□□□□□ -1.71
SF3B1-205ENST00000424674 LCE5AQ5TCM9 118 aa4.34□□□□□ -1.71
SF3B1-205ENST00000424674 POMZP3Q6PJE2 187 aa4.34□□□□□ -1.71
SF3B1-205ENST00000424674 C4orf50Q6ZRC1 276 aa4.34□□□□□ -1.71
SF3B1-205ENST00000424674 B3GNT8Q7Z7M8 397 aa4.34□□□□□ -1.71
SF3B1-205ENST00000424674 RPAINQ86UA6 219 aa4.34□□□□□ -1.71
SF3B1-205ENST00000424674 FAM43AQ8N2R8 423 aa4.34□□□□□ -1.71
SF3B1-205ENST00000424674 LSM14AQ8ND56 463 aaKnown RBP4.34□□□□□ -1.71
SF3B1-205ENST00000424674 OR2W6PQ8NHA6 318 aa4.34□□□□□ -1.71
SF3B1-205ENST00000424674 COG1Q8WTW3 980 aa4.34□□□□□ -1.71
SF3B1-205ENST00000424674 ZBTB10Q96DT7 871 aa4.34□□□□□ -1.71
SF3B1-205ENST00000424674 ZNF496Q96IT1 587 aaPredicted RBP4.34□□□□□ -1.71
SF3B1-205ENST00000424674 YTHDC1Q96MU7 727 aaKnown RBP4.34□□□□□ -1.71
SF3B1-205ENST00000424674 KRTAP4-11Q9BYQ6 195 aa4.34□□□□□ -1.71
SF3B1-205ENST00000424674 ADAM7Q9H2U9 754 aa4.34□□□□□ -1.71
SF3B1-205ENST00000424674 NMRK2Q9NPI5 230 aa4.34□□□□□ -1.71
SF3B1-205ENST00000424674 HELLSQ9NRZ9 838 aa4.34□□□□□ -1.71
SF3B1-205ENST00000424674 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.34□□□□□ -1.71
SF3B1-205ENST00000424674 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.34□□□□□ -1.71
SF3B1-205ENST00000424674 FBXO10Q9UK96 956 aa4.34□□□□□ -1.71
SF3B1-205ENST00000424674 EMC9Q9Y3B6 208 aa4.34□□□□□ -1.71
SF3B1-205ENST00000424674 NOP56O00567 594 aaKnown RBP4.33□□□□□ -1.72
SF3B1-205ENST00000424674 DNAJC8O75937 253 aaPredicted RBP4.33□□□□□ -1.72
SF3B1-205ENST00000424674 MBD4O95243 580 aa4.33□□□□□ -1.72
SF3B1-205ENST00000424674 ZBTB7AO95365 584 aa4.33□□□□□ -1.72
SF3B1-205ENST00000424674 ASLP04424 464 aa4.33□□□□□ -1.72
SF3B1-205ENST00000424674 MYBL2P10244 700 aa4.33□□□□□ -1.72
SF3B1-205ENST00000424674 BPIP17213 487 aa4.33□□□□□ -1.72
SF3B1-205ENST00000424674 CAPN3P20807 821 aa4.33□□□□□ -1.72
SF3B1-205ENST00000424674 TM4SF4P48230 202 aa4.33□□□□□ -1.72
SF3B1-205ENST00000424674 ALDH5A1P51649 535 aaPredicted RBP4.33□□□□□ -1.72
SF3B1-205ENST00000424674 SLURP1P55000 103 aa4.33□□□□□ -1.72
SF3B1-205ENST00000424674 SUMO1P63165 101 aaKnown RBP4.33□□□□□ -1.72
SF3B1-205ENST00000424674 KRT83P78385 493 aa4.33□□□□□ -1.72
SF3B1-205ENST00000424674 KRT85P78386 507 aa4.33□□□□□ -1.72
SF3B1-205ENST00000424674 PFKPQ01813 784 aa4.33□□□□□ -1.72
SF3B1-205ENST00000424674 APBA1Q02410 837 aa4.33□□□□□ -1.72
SF3B1-205ENST00000424674 TRIM14Q14142 442 aa4.33□□□□□ -1.72
SF3B1-205ENST00000424674 GALEQ14376 348 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms