RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 LRRC8DQ7L1W4 858 aa10.32□□□□□ -0.76
PDGFC-202ENST00000422544 MAEAQ7L5Y9 396 aa10.32□□□□□ -0.76
PDGFC-202ENST00000422544 KCTD17Q8N5Z5 321 aa10.32□□□□□ -0.76
PDGFC-202ENST00000422544 LINC01465Q8N7H1 131 aa10.32□□□□□ -0.76
PDGFC-202ENST00000422544 ZNF668Q96K58 619 aaPredicted RBP10.32□□□□□ -0.76
PDGFC-202ENST00000422544 PPP1R16BQ96T49 567 aa10.32□□□□□ -0.76
PDGFC-202ENST00000422544 LBHD1Q9BQE6 289 aaPredicted RBP10.32□□□□□ -0.76
PDGFC-202ENST00000422544 JPH2Q9BR39 696 aaPredicted RBP10.32□□□□□ -0.76
PDGFC-202ENST00000422544 POLD4Q9HCU8 107 aa10.32□□□□□ -0.76
PDGFC-202ENST00000422544 XPNPEP1Q9NQW7 623 aa10.32□□□□□ -0.76
PDGFC-202ENST00000422544 BLOC1S4Q9NUP1 217 aa10.32□□□□□ -0.76
PDGFC-202ENST00000422544 SUCLA2Q9P2R7 463 aaPredicted RBP10.32□□□□□ -0.76
PDGFC-202ENST00000422544 CCDC39Q9UFE4 941 aa10.32□□□□□ -0.76
PDGFC-202ENST00000422544 AKT3Q9Y243 479 aa10.32□□□□□ -0.76
PDGFC-202ENST00000422544 GINS2Q9Y248 185 aa10.32□□□□□ -0.76
PDGFC-202ENST00000422544 CAND2O75155 1236 aa10.31□□□□□ -0.76
PDGFC-202ENST00000422544 RPLP2P05387 115 aaKnown RBP10.31□□□□□ -0.76
PDGFC-202ENST00000422544 CSF2RAP15509 400 aa10.31□□□□□ -0.76
PDGFC-202ENST00000422544 CYP11B2P19099 503 aa10.31□□□□□ -0.76
PDGFC-202ENST00000422544 CMA1P23946 247 aa10.31□□□□□ -0.76
PDGFC-202ENST00000422544 SLC12A3P55017 1021 aa10.31□□□□□ -0.76
PDGFC-202ENST00000422544 MRPS6P82932 125 aaKnown RBP10.31□□□□□ -0.76
PDGFC-202ENST00000422544 MGAT3Q09327 533 aa10.31□□□□□ -0.76
PDGFC-202ENST00000422544 DHX8Q14562 1220 aaKnown RBP10.31□□□□□ -0.76
PDGFC-202ENST00000422544 MCM6Q14566 821 aa10.31□□□□□ -0.76
PDGFC-202ENST00000422544 MBTPS1Q14703 1052 aa10.31□□□□□ -0.76
PDGFC-202ENST00000422544 GPNMBQ14956 572 aa10.31□□□□□ -0.76
PDGFC-202ENST00000422544 KIZQ2M2Z5 673 aa10.31□□□□□ -0.76
PDGFC-202ENST00000422544 FAM26DQ5JW98 314 aa10.31□□□□□ -0.76
PDGFC-202ENST00000422544 IER5Q5VY09 327 aa10.31□□□□□ -0.76
PDGFC-202ENST00000422544 RESP18Q5W5W9 173 aa10.31□□□□□ -0.76
PDGFC-202ENST00000422544 ADALQ6DHV7 355 aa10.31□□□□□ -0.76
PDGFC-202ENST00000422544 DEFB128Q7Z7B8 93 aa10.31□□□□□ -0.76
PDGFC-202ENST00000422544 KSR1Q8IVT5 923 aa10.31□□□□□ -0.76
PDGFC-202ENST00000422544 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.31□□□□□ -0.76
PDGFC-202ENST00000422544 EXOC8Q8IYI6 725 aa10.31□□□□□ -0.76
PDGFC-202ENST00000422544 TMEM199Q8N511 208 aa10.31□□□□□ -0.76
PDGFC-202ENST00000422544 PDILTQ8N807 584 aa10.31□□□□□ -0.76
PDGFC-202ENST00000422544 SYT2Q8N9I0 419 aaPredicted RBP10.31□□□□□ -0.76
PDGFC-202ENST00000422544 PRPF31Q8WWY3 499 aaKnown RBP10.31□□□□□ -0.76
PDGFC-202ENST00000422544 RAD54LQ92698 747 aa10.31□□□□□ -0.76
PDGFC-202ENST00000422544 MAP7D2Q96T17 732 aa10.31□□□□□ -0.76
PDGFC-202ENST00000422544 MTRQ99707 1265 aa10.31□□□□□ -0.76
PDGFC-202ENST00000422544 RUSC1Q9BVN2 902 aa10.31□□□□□ -0.76
PDGFC-202ENST00000422544 CELF4Q9BZC1 486 aaKnown RBP10.31□□□□□ -0.76
PDGFC-202ENST00000422544 OSBPL7Q9BZF2 842 aa10.31□□□□□ -0.76
PDGFC-202ENST00000422544 CDHR5Q9HBB8 845 aa10.31□□□□□ -0.76
PDGFC-202ENST00000422544 ATP6V0A4Q9HBG4 840 aa10.31□□□□□ -0.76
PDGFC-202ENST00000422544 GPRC5CQ9NQ84 441 aa10.31□□□□□ -0.76
PDGFC-202ENST00000422544 FAM13BQ9NYF5 915 aa10.31□□□□□ -0.76
PDGFC-202ENST00000422544 CDY2AQ9Y6F7 541 aa10.31□□□□□ -0.76
PDGFC-202ENST00000422544 MYH9P35579 1960 aaKnown RBP10.3□□□□□ -0.76
PDGFC-202ENST00000422544 A0A1B0GVL5 298 aa10.3□□□□□ -0.76
PDGFC-202ENST00000422544 M0QZ92 97 aa10.3□□□□□ -0.76
PDGFC-202ENST00000422544 NBNO60934 754 aa10.3□□□□□ -0.76
PDGFC-202ENST00000422544 GPR32O75388 356 aa10.3□□□□□ -0.76
PDGFC-202ENST00000422544 ACRP10323 421 aa10.3□□□□□ -0.76
PDGFC-202ENST00000422544 ARL2P36404 184 aa10.3□□□□□ -0.76
PDGFC-202ENST00000422544 STAT6P42226 847 aa10.3□□□□□ -0.76
PDGFC-202ENST00000422544 EPHB4P54760 987 aa10.3□□□□□ -0.76
PDGFC-202ENST00000422544 NLRP11P59045 1033 aaKnown RBP10.3□□□□□ -0.76
PDGFC-202ENST00000422544 FPGSQ05932 587 aa10.3□□□□□ -0.76
PDGFC-202ENST00000422544 NAALADL2Q58DX5 795 aa10.3□□□□□ -0.76
PDGFC-202ENST00000422544 FAM102BQ5T8I3 360 aa10.3□□□□□ -0.76
PDGFC-202ENST00000422544 RINT1Q6NUQ1 792 aa10.3□□□□□ -0.76
PDGFC-202ENST00000422544 CCDC73Q6ZRK6 1079 aa10.3□□□□□ -0.76
PDGFC-202ENST00000422544 C1orf186Q6ZWK4 172 aa10.3□□□□□ -0.76
PDGFC-202ENST00000422544 RHPN2Q8IUC4 686 aa10.3□□□□□ -0.76
PDGFC-202ENST00000422544 TDHQ8IZJ6 230 aa10.3□□□□□ -0.76
PDGFC-202ENST00000422544 TCP11Q8WWU5 503 aa10.3□□□□□ -0.76
PDGFC-202ENST00000422544 PSPC1Q8WXF1 523 aaKnown RBP10.3□□□□□ -0.76
PDGFC-202ENST00000422544 DHX58Q96C10 678 aa10.3□□□□□ -0.76
PDGFC-202ENST00000422544 VWCEQ96DN2 955 aa10.3□□□□□ -0.76
PDGFC-202ENST00000422544 ADAMTS10Q9H324 1103 aa10.3□□□□□ -0.76
PDGFC-202ENST00000422544 TRPV2Q9Y5S1 764 aa10.3□□□□□ -0.76
PDGFC-202ENST00000422544 TRIP12Q14669 1992 aaPredicted RBP10.3□□□□□ -0.76
PDGFC-202ENST00000422544 NPHP3-ACAD11A0A0J9YXS1 232 aa10.29□□□□□ -0.76
PDGFC-202ENST00000422544 A0A1W2PQ27 194 aa10.29□□□□□ -0.76
PDGFC-202ENST00000422544 A0A1W2PQ64 194 aa10.29□□□□□ -0.76
PDGFC-202ENST00000422544 A0A1W2PQD8 194 aa10.29□□□□□ -0.76
PDGFC-202ENST00000422544 GOLGA6L4A6NEF3 574 aa10.29□□□□□ -0.76
PDGFC-202ENST00000422544 POLR2DO15514 142 aaKnown RBP10.29□□□□□ -0.76
PDGFC-202ENST00000422544 GAS2O43903 313 aaKnown RBP10.29□□□□□ -0.76
PDGFC-202ENST00000422544 SRGAP2CP0DJJ0 459 aa10.29□□□□□ -0.76
PDGFC-202ENST00000422544 GHRP10912 638 aa10.29□□□□□ -0.76
PDGFC-202ENST00000422544 PFKFB1P16118 471 aa10.29□□□□□ -0.76
PDGFC-202ENST00000422544 GPC3P51654 580 aa10.29□□□□□ -0.76
PDGFC-202ENST00000422544 CRYBB1P53674 252 aaPredicted RBP10.29□□□□□ -0.76
PDGFC-202ENST00000422544 RAD51AP2Q09MP3 1159 aa10.29□□□□□ -0.76
PDGFC-202ENST00000422544 LAMTOR4Q0VGL1 99 aa10.29□□□□□ -0.76
PDGFC-202ENST00000422544 PPIGQ13427 754 aaKnown RBP eCLIP10.29□□□□□ -0.76
PDGFC-202ENST00000422544 LPIN1Q14693 890 aa10.29□□□□□ -0.76
PDGFC-202ENST00000422544 ARSHQ5FYA8 562 aa10.29□□□□□ -0.76
PDGFC-202ENST00000422544 C16orf59Q7L2K0 433 aa10.29□□□□□ -0.76
PDGFC-202ENST00000422544 GPBP1Q86WP2 473 aa10.29□□□□□ -0.76
PDGFC-202ENST00000422544 IQUBQ8NA54 791 aa10.29□□□□□ -0.76
PDGFC-202ENST00000422544 MCPH1Q8NEM0 835 aa10.29□□□□□ -0.76
PDGFC-202ENST00000422544 ASAP3Q8TDY4 903 aa10.29□□□□□ -0.76
PDGFC-202ENST00000422544 TMEM40Q8WWA1 233 aa10.29□□□□□ -0.76
PDGFC-202ENST00000422544 NLRP7Q8WX94 980 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms