RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 RNF8O76064 485 aa10.56□□□□□ -0.72
CMSS1-201ENST00000421999 CASP14P31944 242 aa10.56□□□□□ -0.72
CMSS1-201ENST00000421999 PSMC4P43686 418 aa10.56□□□□□ -0.72
CMSS1-201ENST00000421999 JAG1P78504 1218 aa10.56□□□□□ -0.72
CMSS1-201ENST00000421999 KRT31Q15323 416 aa10.56□□□□□ -0.72
CMSS1-201ENST00000421999 ZNF667Q5HYK9 610 aa10.56□□□□□ -0.72
CMSS1-201ENST00000421999 REEP2Q9BRK0 252 aa10.56□□□□□ -0.72
CMSS1-201ENST00000421999 GCNT4Q9P109 453 aa10.56□□□□□ -0.72
CMSS1-201ENST00000421999 SUCLA2Q9P2R7 463 aaPredicted RBP10.56□□□□□ -0.72
CMSS1-201ENST00000421999 IGKV6D-41A0A0C4DH26 115 aa10.55□□□□□ -0.72
CMSS1-201ENST00000421999 GOLGA8SH3BPF8 625 aa10.55□□□□□ -0.72
CMSS1-201ENST00000421999 PPP1R11O60927 126 aaPredicted RBP10.55□□□□□ -0.72
CMSS1-201ENST00000421999 H2AFZP0C0S5 128 aa10.55□□□□□ -0.72
CMSS1-201ENST00000421999 CYP2C9P11712 490 aa10.55□□□□□ -0.72
CMSS1-201ENST00000421999 KCNJ6P48051 423 aa10.55□□□□□ -0.72
CMSS1-201ENST00000421999 XRRA1Q6P2D8 792 aa10.55□□□□□ -0.72
CMSS1-201ENST00000421999 H2AFVQ71UI9 128 aa10.55□□□□□ -0.72
CMSS1-201ENST00000421999 FAM169AQ9Y6X4 670 aa10.55□□□□□ -0.72
CMSS1-201ENST00000421999 H0YHG0 523 aa10.55□□□□□ -0.72
CMSS1-201ENST00000421999 HIRAP54198 1017 aaPredicted RBP10.55□□□□□ -0.72
CMSS1-201ENST00000421999 GRB10Q13322 594 aa10.55□□□□□ -0.72
CMSS1-201ENST00000421999 TREML2Q5T2D2 321 aa10.55□□□□□ -0.72
CMSS1-201ENST00000421999 MOXD1Q6UVY6 613 aa10.55□□□□□ -0.72
CMSS1-201ENST00000421999 BTNL9Q6UXG8 535 aa10.55□□□□□ -0.72
CMSS1-201ENST00000421999 HAUS6Q7Z4H7 955 aa10.55□□□□□ -0.72
CMSS1-201ENST00000421999 FBXO16Q8IX29 292 aaPredicted RBP10.55□□□□□ -0.72
CMSS1-201ENST00000421999 IFT81Q8WYA0 676 aa10.55□□□□□ -0.72
CMSS1-201ENST00000421999 MOV10L1Q9BXT6 1211 aaKnown RBP10.55□□□□□ -0.72
CMSS1-201ENST00000421999 PAXBP1Q9Y5B6 917 aa10.55□□□□□ -0.72
CMSS1-201ENST00000421999 THSD7AQ9UPZ6 1657 aa10.55□□□□□ -0.72
CMSS1-201ENST00000421999 PEX10O60683 326 aa10.55□□□□□ -0.72
CMSS1-201ENST00000421999 DGAT1O75907 488 aa10.55□□□□□ -0.72
CMSS1-201ENST00000421999 PGM5Q15124 567 aa10.55□□□□□ -0.72
CMSS1-201ENST00000421999 DGKDQ16760 1214 aa10.55□□□□□ -0.72
CMSS1-201ENST00000421999 TCP11X2Q5H9J9 407 aa10.55□□□□□ -0.72
CMSS1-201ENST00000421999 CFAP58Q5T655 872 aa10.55□□□□□ -0.72
CMSS1-201ENST00000421999 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.55□□□□□ -0.72
CMSS1-201ENST00000421999 SND1Q7KZF4 910 aaKnown RBP eCLIP10.55□□□□□ -0.72
CMSS1-201ENST00000421999 LRRC71Q8N4P6 559 aa10.55□□□□□ -0.72
CMSS1-201ENST00000421999 GPRASP2Q96D09 838 aa10.55□□□□□ -0.72
CMSS1-201ENST00000421999 IQCDQ96DY2 449 aa10.55□□□□□ -0.72
CMSS1-201ENST00000421999 MRPL4Q9BYD3 311 aaKnown RBP10.55□□□□□ -0.72
CMSS1-201ENST00000421999 UBE2TQ9NPD8 197 aaPredicted RBP10.55□□□□□ -0.72
CMSS1-201ENST00000421999 MAP3K20Q9NYL2 800 aaKnown RBP10.55□□□□□ -0.72
CMSS1-201ENST00000421999 ERAP1Q9NZ08 941 aa10.55□□□□□ -0.72
CMSS1-201ENST00000421999 HPSEQ9Y251 543 aa10.55□□□□□ -0.72
CMSS1-201ENST00000421999 MYH3P11055 1940 aa10.55□□□□□ -0.72
CMSS1-201ENST00000421999 SPEF2Q9C093 1822 aa10.55□□□□□ -0.72
CMSS1-201ENST00000421999 ATRNL1Q5VV63 1379 aa10.55□□□□□ -0.72
CMSS1-201ENST00000421999 WNT7AO00755 349 aa10.54□□□□□ -0.72
CMSS1-201ENST00000421999 GAS8O95995 478 aa10.54□□□□□ -0.72
CMSS1-201ENST00000421999 IFNB1P01574 187 aa10.54□□□□□ -0.72
CMSS1-201ENST00000421999 TMEM132BQ14DG7 1078 aa10.54□□□□□ -0.72
CMSS1-201ENST00000421999 GUF1Q8N442 669 aaKnown RBP10.54□□□□□ -0.72
CMSS1-201ENST00000421999 PDCL2Q8N4E4 241 aa10.54□□□□□ -0.72
CMSS1-201ENST00000421999 BBXQ8WY36 941 aaPredicted RBP10.54□□□□□ -0.72
CMSS1-201ENST00000421999 ZBTB9Q96C00 473 aa10.54□□□□□ -0.72
CMSS1-201ENST00000421999 SAAL1Q96ER3 474 aa10.54□□□□□ -0.72
CMSS1-201ENST00000421999 DESI2Q9BSY9 194 aa10.54□□□□□ -0.72
CMSS1-201ENST00000421999 THAP9Q9H5L6 903 aa10.54□□□□□ -0.72
CMSS1-201ENST00000421999 TUBE1Q9UJT0 475 aa10.54□□□□□ -0.72
CMSS1-201ENST00000421999 SPDYE16A6NNV3 312 aaPredicted RBP10.54□□□□□ -0.72
CMSS1-201ENST00000421999 STAM2O75886 525 aa10.54□□□□□ -0.72
CMSS1-201ENST00000421999 ACTR2P61160 394 aa10.54□□□□□ -0.72
CMSS1-201ENST00000421999 PRKCEQ02156 737 aa10.54□□□□□ -0.72
CMSS1-201ENST00000421999 LAMC2Q13753 1193 aa10.54□□□□□ -0.72
CMSS1-201ENST00000421999 KNOP1Q1ED39 458 aaKnown RBP10.54□□□□□ -0.72
CMSS1-201ENST00000421999 RGMBQ6NW40 437 aa10.54□□□□□ -0.72
CMSS1-201ENST00000421999 PPP1R14CQ8TAE6 165 aa10.54□□□□□ -0.72
CMSS1-201ENST00000421999 CCDC77Q9BR77 488 aa10.54□□□□□ -0.72
CMSS1-201ENST00000421999 NDST4Q9H3R1 872 aa10.54□□□□□ -0.72
CMSS1-201ENST00000421999 GCLMP48507 274 aa10.54□□□□□ -0.72
CMSS1-201ENST00000421999 FMR1Q06787 632 aaKnown RBP eCLIP10.54□□□□□ -0.72
CMSS1-201ENST00000421999 NOGQ13253 232 aa10.54□□□□□ -0.72
CMSS1-201ENST00000421999 KCNB1Q14721 858 aa10.54□□□□□ -0.72
CMSS1-201ENST00000421999 PCNX4Q63HM2 1172 aa10.54□□□□□ -0.72
CMSS1-201ENST00000421999 LEKR1Q6ZMV7 388 aa10.54□□□□□ -0.72
CMSS1-201ENST00000421999 CCDC91Q7Z6B0 441 aa10.54□□□□□ -0.72
CMSS1-201ENST00000421999 MTERF4Q7Z6M4 381 aaKnown RBP10.54□□□□□ -0.72
CMSS1-201ENST00000421999 URGCPQ8TCY9 931 aa10.54□□□□□ -0.72
CMSS1-201ENST00000421999 HEXIM2Q96MH2 286 aaKnown RBP10.54□□□□□ -0.72
CMSS1-201ENST00000421999 NAP1L3Q99457 506 aaPredicted RBP10.54□□□□□ -0.72
CMSS1-201ENST00000421999 C7orf25Q9BPX7 421 aa10.54□□□□□ -0.72
CMSS1-201ENST00000421999 TRIM31Q9BZY9 425 aa10.54□□□□□ -0.72
CMSS1-201ENST00000421999 IQCGQ9H095 443 aaKnown RBP10.54□□□□□ -0.72
CMSS1-201ENST00000421999 NR3C1P04150 777 aa10.54□□□□□ -0.72
CMSS1-201ENST00000421999 RHOXF2BP0C7M4 288 aa10.54□□□□□ -0.72
CMSS1-201ENST00000421999 OAZ1P54368 228 aa10.54□□□□□ -0.72
CMSS1-201ENST00000421999 ERVK-9P63128 1117 aa10.54□□□□□ -0.72
CMSS1-201ENST00000421999 ERVK-24P63145 666 aa10.54□□□□□ -0.72
CMSS1-201ENST00000421999 MAP2K1Q02750 393 aaPredicted RBP10.54□□□□□ -0.72
CMSS1-201ENST00000421999 RPS6KA1Q15418 735 aa10.54□□□□□ -0.72
CMSS1-201ENST00000421999 IER5Q5VY09 327 aa10.54□□□□□ -0.72
CMSS1-201ENST00000421999 PPP1R21Q6ZMI0 780 aa10.54□□□□□ -0.72
CMSS1-201ENST00000421999 TRIM50Q86XT4 487 aa10.54□□□□□ -0.72
CMSS1-201ENST00000421999 SCN4BQ8IWT1 228 aa10.54□□□□□ -0.72
CMSS1-201ENST00000421999 CCDC155Q8N6L0 562 aa10.54□□□□□ -0.72
CMSS1-201ENST00000421999 RHOXF2Q9BQY4 288 aa10.54□□□□□ -0.72
CMSS1-201ENST00000421999 STK10O94804 968 aaKnown RBP10.53□□□□□ -0.72
CMSS1-201ENST00000421999 KRT81Q14533 505 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms