RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 JPH2Q9BR39 696 aaPredicted RBP17.42■□□□□ 0.38
DDX55-203ENST00000421670 CLSTN2Q9H4D0 955 aa17.42■□□□□ 0.38
DDX55-203ENST00000421670 AKT3Q9Y243 479 aa17.42■□□□□ 0.38
DDX55-203ENST00000421670 MROH7Q68CQ1 1323 aa17.42■□□□□ 0.38
DDX55-203ENST00000421670 SMIM35A0A1B0GVV1 85 aa17.41■□□□□ 0.38
DDX55-203ENST00000421670 SFI1A8K8P3 1242 aa17.41■□□□□ 0.38
DDX55-203ENST00000421670 GTPBP6O43824 516 aaPredicted RBP17.41■□□□□ 0.38
DDX55-203ENST00000421670 GAS2O43903 313 aaKnown RBP17.41■□□□□ 0.38
DDX55-203ENST00000421670 VTNP04004 478 aa17.41■□□□□ 0.38
DDX55-203ENST00000421670 IDEP14735 1019 aa17.41■□□□□ 0.38
DDX55-203ENST00000421670 MDM2Q00987 491 aaPredicted RBP17.41■□□□□ 0.38
DDX55-203ENST00000421670 TLE2Q04725 743 aa17.41■□□□□ 0.38
DDX55-203ENST00000421670 TMEM62Q0P6H9 643 aa17.41■□□□□ 0.38
DDX55-203ENST00000421670 C1orf53Q5VUE5 145 aa17.41■□□□□ 0.38
DDX55-203ENST00000421670 ANKRD33Q7Z3H0 272 aa17.41■□□□□ 0.38
DDX55-203ENST00000421670 EXOC8Q8IYI6 725 aa17.41■□□□□ 0.38
DDX55-203ENST00000421670 KIAA0319LQ8IZA0 1049 aa17.41■□□□□ 0.38
DDX55-203ENST00000421670 DHX38Q92620 1227 aaKnown RBP17.41■□□□□ 0.38
DDX55-203ENST00000421670 CCDC34Q96HJ3 373 aa17.41■□□□□ 0.38
DDX55-203ENST00000421670 ZNF668Q96K58 619 aaPredicted RBP17.41■□□□□ 0.38
DDX55-203ENST00000421670 PPP1R16BQ96T49 567 aa17.41■□□□□ 0.38
DDX55-203ENST00000421670 SEZ6LQ9BYH1 1024 aa17.41■□□□□ 0.38
DDX55-203ENST00000421670 LRRC27Q9C0I9 530 aa17.41■□□□□ 0.38
DDX55-203ENST00000421670 NUP62CLQ9H1M0 184 aa17.41■□□□□ 0.38
DDX55-203ENST00000421670 ZHX3Q9H4I2 956 aa17.41■□□□□ 0.38
DDX55-203ENST00000421670 SCN5AQ14524 2016 aa17.41■□□□□ 0.38
DDX55-203ENST00000421670 RBAK-RBAKDNI3L0D1 243 aa17.4■□□□□ 0.38
DDX55-203ENST00000421670 TBCAO75347 108 aaKnown RBP17.4■□□□□ 0.38
DDX55-203ENST00000421670 CD4P01730 458 aa17.4■□□□□ 0.38
DDX55-203ENST00000421670 TMOD1P28289 359 aa17.4■□□□□ 0.38
DDX55-203ENST00000421670 DNM2P50570 870 aa17.4■□□□□ 0.38
DDX55-203ENST00000421670 DPYDQ12882 1025 aa17.4■□□□□ 0.38
DDX55-203ENST00000421670 KLHL40Q2TBA0 621 aa17.4■□□□□ 0.38
DDX55-203ENST00000421670 TAF2Q6P1X5 1199 aa17.4■□□□□ 0.38
DDX55-203ENST00000421670 RHPN2Q8IUC4 686 aa17.4■□□□□ 0.38
DDX55-203ENST00000421670 KSR1Q8IVT5 923 aa17.4■□□□□ 0.38
DDX55-203ENST00000421670 ASAP3Q8TDY4 903 aa17.4■□□□□ 0.38
DDX55-203ENST00000421670 PSPC1Q8WXF1 523 aaKnown RBP17.4■□□□□ 0.38
DDX55-203ENST00000421670 BSNDQ8WZ55 320 aa17.4■□□□□ 0.38
DDX55-203ENST00000421670 DRC1Q96MC2 740 aa17.4■□□□□ 0.38
DDX55-203ENST00000421670 MAP7D2Q96T17 732 aa17.4■□□□□ 0.38
DDX55-203ENST00000421670 TIPINQ9BVW5 301 aa17.4■□□□□ 0.38
DDX55-203ENST00000421670 SUCLA2Q9P2R7 463 aaPredicted RBP17.4■□□□□ 0.38
DDX55-203ENST00000421670 ODF2LQ9ULJ1 636 aa17.4■□□□□ 0.38
DDX55-203ENST00000421670 TNRC18O15417 2968 aaPredicted RBP17.4■□□□□ 0.38
DDX55-203ENST00000421670 FAM13AO94988 1023 aa17.4■□□□□ 0.38
DDX55-203ENST00000421670 ARL2P36404 184 aa17.4■□□□□ 0.38
DDX55-203ENST00000421670 PTK7Q13308 1070 aa17.4■□□□□ 0.38
DDX55-203ENST00000421670 IER5Q5VY09 327 aa17.4■□□□□ 0.38
DDX55-203ENST00000421670 CAVIN1Q6NZI2 390 aaKnown RBP17.4■□□□□ 0.38
DDX55-203ENST00000421670 TCP11Q8WWU5 503 aa17.4■□□□□ 0.38
DDX55-203ENST00000421670 PRPF31Q8WWY3 499 aaKnown RBP17.4■□□□□ 0.38
DDX55-203ENST00000421670 KIFAP3Q92845 792 aa17.4■□□□□ 0.38
DDX55-203ENST00000421670 TMEM63CQ9P1W3 806 aa17.4■□□□□ 0.38
DDX55-203ENST00000421670 HOOK1Q9UJC3 728 aaKnown RBP17.4■□□□□ 0.38
DDX55-203ENST00000421670 COL4A3BPQ9Y5P4 624 aa17.4■□□□□ 0.38
DDX55-203ENST00000421670 TLR3O15455 904 aaKnown RBP17.39■□□□□ 0.37
DDX55-203ENST00000421670 MYL1P05976 194 aa17.39■□□□□ 0.37
DDX55-203ENST00000421670 CTSHP09668 335 aa17.39■□□□□ 0.37
DDX55-203ENST00000421670 GLRA2P23416 452 aa17.39■□□□□ 0.37
DDX55-203ENST00000421670 FAAP100Q0VG06 881 aa17.39■□□□□ 0.37
DDX55-203ENST00000421670 LAMTOR4Q0VGL1 99 aa17.39■□□□□ 0.37
DDX55-203ENST00000421670 CNNM4Q6P4Q7 775 aa17.39■□□□□ 0.37
DDX55-203ENST00000421670 PARVGQ9HBI0 331 aa17.39■□□□□ 0.37
DDX55-203ENST00000421670 PANK4Q9NVE7 773 aa17.39■□□□□ 0.37
DDX55-203ENST00000421670 FRMD3A2A2Y4 597 aa17.38■□□□□ 0.37
DDX55-203ENST00000421670 DCDC2CA8MYV0 355 aa17.38■□□□□ 0.37
DDX55-203ENST00000421670 KLRC4O43908 158 aa17.38■□□□□ 0.37
DDX55-203ENST00000421670 TRAK2O60296 914 aa17.38■□□□□ 0.37
DDX55-203ENST00000421670 RPN1P04843 607 aaKnown RBP17.38■□□□□ 0.37
DDX55-203ENST00000421670 THPOP40225 353 aa17.38■□□□□ 0.37
DDX55-203ENST00000421670 ZNF131P52739 623 aa17.38■□□□□ 0.37
DDX55-203ENST00000421670 PEX3P56589 373 aa17.38■□□□□ 0.37
DDX55-203ENST00000421670 COASYQ13057 564 aa17.38■□□□□ 0.37
DDX55-203ENST00000421670 CAPSQ13938 189 aa17.38■□□□□ 0.37
DDX55-203ENST00000421670 KIZQ2M2Z5 673 aa17.38■□□□□ 0.37
DDX55-203ENST00000421670 TRIM71Q2Q1W2 868 aaKnown RBP17.38■□□□□ 0.37
DDX55-203ENST00000421670 UNC13DQ70J99 1090 aa17.38■□□□□ 0.37
DDX55-203ENST00000421670 SFR1Q86XK3 245 aa17.38■□□□□ 0.37
DDX55-203ENST00000421670 ELOA2Q8IYF1 753 aaPredicted RBP17.38■□□□□ 0.37
DDX55-203ENST00000421670 HPS3Q969F9 1004 aa17.38■□□□□ 0.37
DDX55-203ENST00000421670 NLRP4Q96MN2 994 aa17.38■□□□□ 0.37
DDX55-203ENST00000421670 TOX2Q96NM4 488 aa17.38■□□□□ 0.37
DDX55-203ENST00000421670 KIFC3Q9BVG8 833 aa17.38■□□□□ 0.37
DDX55-203ENST00000421670 GINS2Q9Y248 185 aa17.38■□□□□ 0.37
DDX55-203ENST00000421670 GPC3P51654 580 aa17.37■□□□□ 0.37
DDX55-203ENST00000421670 NLRP11P59045 1033 aaKnown RBP17.37■□□□□ 0.37
DDX55-203ENST00000421670 ODR4Q5SWX8 454 aa17.37■□□□□ 0.37
DDX55-203ENST00000421670 CCDC183Q5T5S1 534 aa17.37■□□□□ 0.37
DDX55-203ENST00000421670 CCDC65Q8IXS2 484 aa17.37■□□□□ 0.37
DDX55-203ENST00000421670 MYCT1Q8N699 235 aa17.37■□□□□ 0.37
DDX55-203ENST00000421670 PCDHA5Q9Y5H7 936 aa17.37■□□□□ 0.37
DDX55-203ENST00000421670 LTBP2Q14767 1821 aa17.37■□□□□ 0.37
DDX55-203ENST00000421670 LRRIQ4A6NIV6 560 aa17.36■□□□□ 0.37
DDX55-203ENST00000421670 SRGAP2CP0DJJ0 459 aa17.36■□□□□ 0.37
DDX55-203ENST00000421670 PLS3P13797 630 aa17.36■□□□□ 0.37
DDX55-203ENST00000421670 DMP1Q13316 513 aaPredicted RBP17.36■□□□□ 0.37
DDX55-203ENST00000421670 MXD4Q14582 209 aaPredicted RBP17.36■□□□□ 0.37
DDX55-203ENST00000421670 KMT5BQ4FZB7 885 aa17.36■□□□□ 0.37
DDX55-203ENST00000421670 HERC4Q5GLZ8 1057 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms