RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 PFKFB3Q16875 520 aaPredicted RBP14.6□□□□□ -0.07
LINC00339-203ENST00000420503 PRR16Q569H4 304 aa14.6□□□□□ -0.07
LINC00339-203ENST00000420503 EFCAB12Q6NXP0 572 aa14.6□□□□□ -0.07
LINC00339-203ENST00000420503 TMEM184AQ6ZMB5 413 aa14.6□□□□□ -0.07
LINC00339-203ENST00000420503 SYNE3Q6ZMZ3 975 aa14.6□□□□□ -0.07
LINC00339-203ENST00000420503 NIPA1Q7RTP0 329 aa14.6□□□□□ -0.07
LINC00339-203ENST00000420503 ECHDC2Q86YB7 292 aa14.6□□□□□ -0.07
LINC00339-203ENST00000420503 HELQQ8TDG4 1101 aa14.6□□□□□ -0.07
LINC00339-203ENST00000420503 BCL7CQ8WUZ0 217 aaPredicted RBP14.6□□□□□ -0.07
LINC00339-203ENST00000420503 BBXQ8WY36 941 aaPredicted RBP14.6□□□□□ -0.07
LINC00339-203ENST00000420503 AKT3Q9Y243 479 aa14.6□□□□□ -0.07
LINC00339-203ENST00000420503 HCFC2Q9Y5Z7 792 aa14.6□□□□□ -0.07
LINC00339-203ENST00000420503 MYO15AQ9UKN7 3530 aa14.59□□□□□ -0.07
LINC00339-203ENST00000420503 MEIS3P2A8K0S8 358 aa14.59□□□□□ -0.07
LINC00339-203ENST00000420503 CHMP2AO43633 222 aa14.59□□□□□ -0.07
LINC00339-203ENST00000420503 B4GALT3O60512 393 aa14.59□□□□□ -0.07
LINC00339-203ENST00000420503 BRD1O95696 1058 aa14.59□□□□□ -0.07
LINC00339-203ENST00000420503 CYP3A4P08684 503 aa14.59□□□□□ -0.07
LINC00339-203ENST00000420503 METAP2P50579 478 aaKnown RBP eCLIP14.59□□□□□ -0.07
LINC00339-203ENST00000420503 DHX32Q7L7V1 743 aaKnown RBP14.59□□□□□ -0.07
LINC00339-203ENST00000420503 ZNF598Q86UK7 904 aaKnown RBP14.59□□□□□ -0.07
LINC00339-203ENST00000420503 SLC39A11Q8N1S5 342 aa14.59□□□□□ -0.07
LINC00339-203ENST00000420503 KREMEN2Q8NCW0 462 aa14.59□□□□□ -0.07
LINC00339-203ENST00000420503 TNPO1Q92973 898 aaKnown RBP14.59□□□□□ -0.07
LINC00339-203ENST00000420503 LPPQ93052 612 aa14.59□□□□□ -0.07
LINC00339-203ENST00000420503 PHKBQ93100 1093 aa14.59□□□□□ -0.07
LINC00339-203ENST00000420503 ZNF558Q96NG5 402 aa14.59□□□□□ -0.07
LINC00339-203ENST00000420503 CDCA3Q99618 268 aaPredicted RBP14.59□□□□□ -0.07
LINC00339-203ENST00000420503 ELAC1Q9H777 363 aaKnown RBP14.59□□□□□ -0.07
LINC00339-203ENST00000420503 SPTBN4Q9H254 2564 aa14.59□□□□□ -0.07
LINC00339-203ENST00000420503 FAM186AA6NE01 2351 aa14.58□□□□□ -0.08
LINC00339-203ENST00000420503 C2orf71A6NGG8 1288 aa14.58□□□□□ -0.08
LINC00339-203ENST00000420503 CLASP2O75122 1294 aaKnown RBP14.58□□□□□ -0.08
LINC00339-203ENST00000420503 GPC3P51654 580 aa14.58□□□□□ -0.08
LINC00339-203ENST00000420503 PRKCEQ02156 737 aa14.58□□□□□ -0.08
LINC00339-203ENST00000420503 ZNF746Q6NUN9 644 aaPredicted RBP14.58□□□□□ -0.08
LINC00339-203ENST00000420503 TMC7Q7Z402 723 aa14.58□□□□□ -0.08
LINC00339-203ENST00000420503 ZBTB33Q86T24 672 aa14.58□□□□□ -0.08
LINC00339-203ENST00000420503 LRRC43Q8N309 656 aa14.58□□□□□ -0.08
LINC00339-203ENST00000420503 LZTS1Q9Y250 596 aa14.58□□□□□ -0.08
LINC00339-203ENST00000420503 MSH4O15457 936 aa14.57□□□□□ -0.08
LINC00339-203ENST00000420503 GFRA3O60609 400 aa14.57□□□□□ -0.08
LINC00339-203ENST00000420503 OATP04181 439 aa14.57□□□□□ -0.08
LINC00339-203ENST00000420503 PSAPP07602 524 aa14.57□□□□□ -0.08
LINC00339-203ENST00000420503 DARSP14868 501 aaKnown RBP14.57□□□□□ -0.08
LINC00339-203ENST00000420503 EPCAMP16422 314 aa14.57□□□□□ -0.08
LINC00339-203ENST00000420503 CA8P35219 290 aa14.57□□□□□ -0.08
LINC00339-203ENST00000420503 RARS2Q5T160 578 aaKnown RBP14.57□□□□□ -0.08
LINC00339-203ENST00000420503 TMEM105Q8N8V8 129 aa14.57□□□□□ -0.08
LINC00339-203ENST00000420503 VN1R3Q9BXE9 311 aa14.57□□□□□ -0.08
LINC00339-203ENST00000420503 ZMYND12Q9H0C1 365 aa14.57□□□□□ -0.08
LINC00339-203ENST00000420503 SPG21Q9NZD8 308 aa14.57□□□□□ -0.08
LINC00339-203ENST00000420503 SAMM50Q9Y512 469 aa14.57□□□□□ -0.08
LINC00339-203ENST00000420503 PCDHA10Q9Y5I2 948 aa14.57□□□□□ -0.08
LINC00339-203ENST00000420503 hCG_1984214I3L0E3 225 aa14.56□□□□□ -0.08
LINC00339-203ENST00000420503 EIF4BP23588 611 aaKnown RBP14.56□□□□□ -0.08
LINC00339-203ENST00000420503 BCAR1P56945 870 aa14.56□□□□□ -0.08
LINC00339-203ENST00000420503 ABI1Q8IZP0 508 aa14.56□□□□□ -0.08
LINC00339-203ENST00000420503 REXO1Q8N1G1 1221 aaKnown RBP14.56□□□□□ -0.08
LINC00339-203ENST00000420503 ZNF713Q8N859 430 aaPredicted RBP14.56□□□□□ -0.08
LINC00339-203ENST00000420503 MRPL43Q8N983 215 aaKnown RBP14.56□□□□□ -0.08
LINC00339-203ENST00000420503 ATOH1Q92858 354 aaPredicted RBP14.56□□□□□ -0.08
LINC00339-203ENST00000420503 SNX27Q96L92 541 aa14.56□□□□□ -0.08
LINC00339-203ENST00000420503 RIPOR3Q96MK2 946 aa14.56□□□□□ -0.08
LINC00339-203ENST00000420503 MAP7D2Q96T17 732 aa14.56□□□□□ -0.08
LINC00339-203ENST00000420503 UNC45AQ9H3U1 944 aa14.56□□□□□ -0.08
LINC00339-203ENST00000420503 DISC1Q9NRI5 854 aa14.56□□□□□ -0.08
LINC00339-203ENST00000420503 TBC1D22BQ9NU19 505 aa14.56□□□□□ -0.08
LINC00339-203ENST00000420503 VPS54Q9P1Q0 977 aa14.56□□□□□ -0.08
LINC00339-203ENST00000420503 PUF60Q9UHX1 559 aaKnown RBP14.56□□□□□ -0.08
LINC00339-203ENST00000420503 VPS13AQ96RL7 3174 aa14.56□□□□□ -0.08
LINC00339-203ENST00000420503 C2orf16Q68DN1 1984 aa14.55□□□□□ -0.08
LINC00339-203ENST00000420503 ESYT2A0FGR8 921 aa14.55□□□□□ -0.08
LINC00339-203ENST00000420503 DTNBO60941 627 aa14.55□□□□□ -0.08
LINC00339-203ENST00000420503 STBD1O95210 358 aa14.55□□□□□ -0.08
LINC00339-203ENST00000420503 CIITAP33076 1130 aa14.55□□□□□ -0.08
LINC00339-203ENST00000420503 SETQ01105 290 aaPredicted RBP14.55□□□□□ -0.08
LINC00339-203ENST00000420503 SMC1AQ14683 1233 aaKnown RBP14.55□□□□□ -0.08
LINC00339-203ENST00000420503 PDE12Q6L8Q7 609 aaKnown RBP14.55□□□□□ -0.08
LINC00339-203ENST00000420503 Q6ZUG5 572 aa14.55□□□□□ -0.08
LINC00339-203ENST00000420503 ASCL5Q7RTU5 278 aa14.55□□□□□ -0.08
LINC00339-203ENST00000420503 KSR1Q8IVT5 923 aa14.55□□□□□ -0.08
LINC00339-203ENST00000420503 SMAP1Q8IYB5 467 aaPredicted RBP14.55□□□□□ -0.08
LINC00339-203ENST00000420503 BRF1Q92994 677 aa14.55□□□□□ -0.08
LINC00339-203ENST00000420503 SCLT1Q96NL6 688 aa14.55□□□□□ -0.08
LINC00339-203ENST00000420503 CEP89Q96ST8 783 aa14.55□□□□□ -0.08
LINC00339-203ENST00000420503 ADAM7Q9H2U9 754 aa14.55□□□□□ -0.08
LINC00339-203ENST00000420503 NCOA5Q9HCD5 579 aaKnown RBP14.55□□□□□ -0.08
LINC00339-203ENST00000420503 NGRNQ9NPE2 291 aaKnown RBP14.55□□□□□ -0.08
LINC00339-203ENST00000420503 DENND4AQ7Z401 1863 aa14.55□□□□□ -0.08
LINC00339-203ENST00000420503 A0A0U1RQF3 1178 aa14.54□□□□□ -0.08
LINC00339-203ENST00000420503 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.54□□□□□ -0.08
LINC00339-203ENST00000420503 WDR64B1ANS9 1081 aa14.54□□□□□ -0.08
LINC00339-203ENST00000420503 MAGEB2O15479 319 aa14.54□□□□□ -0.08
LINC00339-203ENST00000420503 ZC3H11AO75152 810 aaKnown RBP eCLIP14.54□□□□□ -0.08
LINC00339-203ENST00000420503 TDP2O95551 362 aa14.54□□□□□ -0.08
LINC00339-203ENST00000420503 ZSCAN20P17040 1043 aaPredicted RBP14.54□□□□□ -0.08
LINC00339-203ENST00000420503 AFF1P51825 1210 aaKnown RBP14.54□□□□□ -0.08
LINC00339-203ENST00000420503 TARBP2Q15633 366 aaKnown RBP14.54□□□□□ -0.08
LINC00339-203ENST00000420503 NTRK3Q16288 839 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms