RNA–Protein interactions for RNA: ENST00000419472.1

VPS13A-207, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 1 (best)

Gene VPS13A, Length 2,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-207ENST00000419472 ELOA3CA0A087WX78 387 aaPredicted RBP5.97□□□□□ -1.45
VPS13A-207ENST00000419472 POM121BA6NF01 834 aa5.97□□□□□ -1.45
VPS13A-207ENST00000419472 ELOA3DA6NLF2 546 aaPredicted RBP5.97□□□□□ -1.45
VPS13A-207ENST00000419472 FAM47E-STBD1D6RA91 191 aa5.97□□□□□ -1.45
VPS13A-207ENST00000419472 POLBP06746 335 aa5.97□□□□□ -1.45
VPS13A-207ENST00000419472 ATP1A3P13637 1013 aa5.97□□□□□ -1.45
VPS13A-207ENST00000419472 ADD2P35612 726 aa5.97□□□□□ -1.45
VPS13A-207ENST00000419472 SEC23AQ15436 765 aa5.97□□□□□ -1.45
VPS13A-207ENST00000419472 ARHGAP44Q17R89 818 aa5.97□□□□□ -1.45
VPS13A-207ENST00000419472 ELOA3BQ3SY89 546 aa5.97□□□□□ -1.45
VPS13A-207ENST00000419472 KLHDC7AQ5VTJ3 777 aa5.97□□□□□ -1.45
VPS13A-207ENST00000419472 GET4Q7L5D6 327 aaPredicted RBP5.97□□□□□ -1.45
VPS13A-207ENST00000419472 HEATR4Q86WZ0 1026 aa5.97□□□□□ -1.45
VPS13A-207ENST00000419472 MFSD2AQ8NA29 543 aa5.97□□□□□ -1.45
VPS13A-207ENST00000419472 ELOA3Q8NG57 546 aa5.97□□□□□ -1.45
VPS13A-207ENST00000419472 SIN3AQ96ST3 1273 aa5.97□□□□□ -1.45
VPS13A-207ENST00000419472 BARD1Q99728 777 aaKnown RBP5.97□□□□□ -1.45
VPS13A-207ENST00000419472 KIAA1586Q9HCI6 787 aa5.97□□□□□ -1.45
VPS13A-207ENST00000419472 ZNF142P52746 1687 aaPredicted RBP5.97□□□□□ -1.45
VPS13A-207ENST00000419472 DHX57Q6P158 1386 aaKnown RBP5.97□□□□□ -1.45
VPS13A-207ENST00000419472 COL6A2P12110 1019 aa5.97□□□□□ -1.45
VPS13A-207ENST00000419472 CD68P34810 354 aaPredicted RBP5.97□□□□□ -1.45
VPS13A-207ENST00000419472 LACTBP83111 547 aaPredicted RBP5.97□□□□□ -1.45
VPS13A-207ENST00000419472 ICA1Q05084 483 aa5.97□□□□□ -1.45
VPS13A-207ENST00000419472 PDE1CQ14123 709 aaPredicted RBP5.97□□□□□ -1.45
VPS13A-207ENST00000419472 TESK1Q15569 626 aa5.97□□□□□ -1.45
VPS13A-207ENST00000419472 C3orf36Q3SXR2 165 aa5.97□□□□□ -1.45
VPS13A-207ENST00000419472 RINLQ6ZS11 566 aa5.97□□□□□ -1.45
VPS13A-207ENST00000419472 CPNE8Q86YQ8 564 aa5.97□□□□□ -1.45
VPS13A-207ENST00000419472 NOSTRINQ8IVI9 506 aa5.97□□□□□ -1.45
VPS13A-207ENST00000419472 SMYD4Q8IYR2 804 aaPredicted RBP5.97□□□□□ -1.45
VPS13A-207ENST00000419472 PHKBQ93100 1093 aa5.97□□□□□ -1.45
VPS13A-207ENST00000419472 C18orf8Q96DM3 657 aa5.97□□□□□ -1.45
VPS13A-207ENST00000419472 SEC62Q99442 399 aaKnown RBP5.97□□□□□ -1.45
VPS13A-207ENST00000419472 SORBS1Q9BX66 1292 aaKnown RBP5.97□□□□□ -1.45
VPS13A-207ENST00000419472 ASPNQ9BXN1 380 aa5.97□□□□□ -1.45
VPS13A-207ENST00000419472 SLC26A6Q9BXS9 759 aa5.97□□□□□ -1.45
VPS13A-207ENST00000419472 TMPRSS13Q9BYE2 586 aa5.97□□□□□ -1.45
VPS13A-207ENST00000419472 C14orf93Q9H972 538 aaKnown RBP5.97□□□□□ -1.45
VPS13A-207ENST00000419472 ARMT1Q9H993 441 aa5.97□□□□□ -1.45
VPS13A-207ENST00000419472 PIDD1Q9HB75 910 aa5.97□□□□□ -1.45
VPS13A-207ENST00000419472 RRP7BPQ9NSQ0 103 aa5.97□□□□□ -1.45
VPS13A-207ENST00000419472 STAP2Q9UGK3 403 aa5.97□□□□□ -1.45
VPS13A-207ENST00000419472 GJD2Q9UKL4 321 aa5.97□□□□□ -1.45
VPS13A-207ENST00000419472 NAP1L2Q9ULW6 460 aaPredicted RBP5.97□□□□□ -1.45
VPS13A-207ENST00000419472 FAM187AA6NFU0 413 aa5.96□□□□□ -1.45
VPS13A-207ENST00000419472 SCDO00767 359 aa5.96□□□□□ -1.45
VPS13A-207ENST00000419472 GSTA4O15217 222 aa5.96□□□□□ -1.45
VPS13A-207ENST00000419472 POSTNQ15063 836 aa5.96□□□□□ -1.45
VPS13A-207ENST00000419472 SLC45A4Q5BKX6 768 aa5.96□□□□□ -1.45
VPS13A-207ENST00000419472 SPECC1Q5M775 1068 aa5.96□□□□□ -1.45
VPS13A-207ENST00000419472 CCDC62Q6P9F0 684 aa5.96□□□□□ -1.45
VPS13A-207ENST00000419472 SPOCD1Q6ZMY3 1216 aa5.96□□□□□ -1.45
VPS13A-207ENST00000419472 FRMD7Q6ZUT3 714 aa5.96□□□□□ -1.45
VPS13A-207ENST00000419472 MAEAQ7L5Y9 396 aa5.96□□□□□ -1.45
VPS13A-207ENST00000419472 WFDC8Q8IUA0 241 aa5.96□□□□□ -1.45
VPS13A-207ENST00000419472 AFAP1Q8N556 730 aa5.96□□□□□ -1.45
VPS13A-207ENST00000419472 ZNF527Q8NB42 609 aa5.96□□□□□ -1.45
VPS13A-207ENST00000419472 ATP6V0A4Q9HBG4 840 aa5.96□□□□□ -1.45
VPS13A-207ENST00000419472 SMYD2Q9NRG4 433 aa5.96□□□□□ -1.45
VPS13A-207ENST00000419472 GJB4Q9NTQ9 266 aa5.96□□□□□ -1.45
VPS13A-207ENST00000419472 ITGB1BP2Q9UKP3 347 aa5.96□□□□□ -1.45
VPS13A-207ENST00000419472 AFG3L2Q9Y4W6 797 aa5.96□□□□□ -1.45
VPS13A-207ENST00000419472 NR2E3Q9Y5X4 410 aa5.96□□□□□ -1.45
VPS13A-207ENST00000419472 KDM5DQ9BY66 1539 aa5.96□□□□□ -1.46
VPS13A-207ENST00000419472 DUOX2Q9NRD8 1548 aa5.96□□□□□ -1.46
VPS13A-207ENST00000419472 DHX29Q7Z478 1369 aaKnown RBP5.96□□□□□ -1.46
VPS13A-207ENST00000419472 F8W8V4 182 aa5.96□□□□□ -1.46
VPS13A-207ENST00000419472 DEAF1O75398 565 aaPredicted RBP5.96□□□□□ -1.46
VPS13A-207ENST00000419472 TSHRP16473 764 aa5.96□□□□□ -1.46
VPS13A-207ENST00000419472 CALD1Q05682 793 aaKnown RBP5.96□□□□□ -1.46
VPS13A-207ENST00000419472 BLMHQ13867 455 aa5.96□□□□□ -1.46
VPS13A-207ENST00000419472 PITRM1Q5JRX3 1037 aa5.96□□□□□ -1.46
VPS13A-207ENST00000419472 MSL1Q68DK7 614 aa5.96□□□□□ -1.46
VPS13A-207ENST00000419472 FAAH2Q6GMR7 532 aa5.96□□□□□ -1.46
VPS13A-207ENST00000419472 DAAM2Q86T65 1068 aa5.96□□□□□ -1.46
VPS13A-207ENST00000419472 ATG16L2Q8NAA4 619 aa5.96□□□□□ -1.46
VPS13A-207ENST00000419472 ASB12Q8WXK4 309 aa5.96□□□□□ -1.46
VPS13A-207ENST00000419472 ARL8AQ96BM9 186 aa5.96□□□□□ -1.46
VPS13A-207ENST00000419472 ZMAT3Q9HA38 289 aaKnown RBP5.96□□□□□ -1.46
VPS13A-207ENST00000419472 ACTL7BQ9Y614 415 aa5.96□□□□□ -1.46
VPS13A-207ENST00000419472 FGD6Q6ZV73 1430 aa5.96□□□□□ -1.46
VPS13A-207ENST00000419472 ORC4O43929 436 aa5.95□□□□□ -1.46
VPS13A-207ENST00000419472 CSTBP04080 98 aaKnown RBP5.95□□□□□ -1.46
VPS13A-207ENST00000419472 DHRS4L1P0CG22 281 aa5.95□□□□□ -1.46
VPS13A-207ENST00000419472 CKMT1AP12532 417 aa5.95□□□□□ -1.46
VPS13A-207ENST00000419472 KCNAB2Q13303 367 aa5.95□□□□□ -1.46
VPS13A-207ENST00000419472 E4F1Q66K89 784 aaPredicted RBP5.95□□□□□ -1.46
VPS13A-207ENST00000419472 ARHGAP36Q6ZRI8 547 aa5.95□□□□□ -1.46
VPS13A-207ENST00000419472 ANKRD18AQ8IVF6 992 aa5.95□□□□□ -1.46
VPS13A-207ENST00000419472 RPGRQ92834 1020 aaKnown RBP5.95□□□□□ -1.46
VPS13A-207ENST00000419472 RNF166Q96A37 237 aaPredicted RBP5.95□□□□□ -1.46
VPS13A-207ENST00000419472 CLTCQ00610 1675 aaKnown RBP5.95□□□□□ -1.46
VPS13A-207ENST00000419472 DEPDC5O75140 1603 aa5.95□□□□□ -1.46
VPS13A-207ENST00000419472 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.95□□□□□ -1.46
VPS13A-207ENST00000419472 SYNGAP1Q96PV0 1343 aa5.95□□□□□ -1.46
VPS13A-207ENST00000419472 CENPJQ9HC77 1338 aaPredicted RBP5.95□□□□□ -1.46
VPS13A-207ENST00000419472 CCDC154A6NI56 674 aa5.95□□□□□ -1.46
VPS13A-207ENST00000419472 NKRFO15226 690 aaKnown RBP eCLIP5.95□□□□□ -1.46
VPS13A-207ENST00000419472 MGEA5O60502 916 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms