RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 KAT5Q92993 513 aa12.93□□□□□ -0.34
LIMK1-202ENST00000418310 NAP1L4Q99733 375 aaKnown RBP12.93□□□□□ -0.34
LIMK1-202ENST00000418310 AMFRQ9UKV5 643 aa12.93□□□□□ -0.34
LIMK1-202ENST00000418310 MYO3BQ8WXR4 1341 aa12.93□□□□□ -0.34
LIMK1-202ENST00000418310 ECE2O60344 883 aa12.92□□□□□ -0.34
LIMK1-202ENST00000418310 SLITRK3O94933 977 aa12.92□□□□□ -0.34
LIMK1-202ENST00000418310 TNFAIP3P21580 790 aa12.92□□□□□ -0.34
LIMK1-202ENST00000418310 PSMC2P35998 433 aaKnown RBP12.92□□□□□ -0.34
LIMK1-202ENST00000418310 SREBF1P36956 1147 aa12.92□□□□□ -0.34
LIMK1-202ENST00000418310 IFI16Q16666 785 aaKnown RBP12.92□□□□□ -0.34
LIMK1-202ENST00000418310 WHAMMQ8TF30 809 aa12.92□□□□□ -0.34
LIMK1-202ENST00000418310 PRMT6Q96LA8 375 aaPredicted RBP12.92□□□□□ -0.34
LIMK1-202ENST00000418310 PARVGQ9HBI0 331 aa12.92□□□□□ -0.34
LIMK1-202ENST00000418310 ERVK-5Q9HDB9 667 aa12.92□□□□□ -0.34
LIMK1-202ENST00000418310 PPP1R37O75864 691 aa12.92□□□□□ -0.34
LIMK1-202ENST00000418310 CALCAP01258 141 aa12.92□□□□□ -0.34
LIMK1-202ENST00000418310 ECHS1P30084 290 aa12.92□□□□□ -0.34
LIMK1-202ENST00000418310 GCLMP48507 274 aa12.92□□□□□ -0.34
LIMK1-202ENST00000418310 MARCKSL1P49006 195 aa12.92□□□□□ -0.34
LIMK1-202ENST00000418310 FMO5P49326 533 aa12.92□□□□□ -0.34
LIMK1-202ENST00000418310 HHIPL2Q6UWX4 724 aa12.92□□□□□ -0.34
LIMK1-202ENST00000418310 TMEM179Q6ZVK1 233 aa12.92□□□□□ -0.34
LIMK1-202ENST00000418310 BTBD6Q96KE9 485 aa12.92□□□□□ -0.34
LIMK1-202ENST00000418310 CCDC113Q9H0I3 377 aa12.92□□□□□ -0.34
LIMK1-202ENST00000418310 VEZTQ9HBM0 779 aa12.92□□□□□ -0.34
LIMK1-202ENST00000418310 NYAP2Q9P242 653 aa12.92□□□□□ -0.34
LIMK1-202ENST00000418310 SNX24Q9Y343 169 aa12.92□□□□□ -0.34
LIMK1-202ENST00000418310 F8VZ95 297 aa12.92□□□□□ -0.34
LIMK1-202ENST00000418310 SORBS3O60504 671 aa12.92□□□□□ -0.34
LIMK1-202ENST00000418310 EYA4O95677 639 aa12.92□□□□□ -0.34
LIMK1-202ENST00000418310 ADRA2BP18089 450 aa12.92□□□□□ -0.34
LIMK1-202ENST00000418310 PLTPP55058 493 aa12.92□□□□□ -0.34
LIMK1-202ENST00000418310 EPM2AIP1Q7L775 607 aaPredicted RBP12.92□□□□□ -0.34
LIMK1-202ENST00000418310 NT5DC3Q86UY8 548 aa12.92□□□□□ -0.34
LIMK1-202ENST00000418310 ZNF473Q8WTR7 871 aaKnown RBP12.92□□□□□ -0.34
LIMK1-202ENST00000418310 ISCUQ9H1K1 167 aa12.92□□□□□ -0.34
LIMK1-202ENST00000418310 PLCB1Q9NQ66 1216 aa12.92□□□□□ -0.34
LIMK1-202ENST00000418310 CTTNBP2NLQ9P2B4 639 aa12.92□□□□□ -0.34
LIMK1-202ENST00000418310 FRMD4BQ9Y2L6 1034 aa12.92□□□□□ -0.34
LIMK1-202ENST00000418310 PTPN22Q9Y2R2 807 aa12.92□□□□□ -0.34
LIMK1-202ENST00000418310 AFF2P51816 1311 aa12.92□□□□□ -0.34
LIMK1-202ENST00000418310 A0A087WUV0 522 aaPredicted RBP12.91□□□□□ -0.34
LIMK1-202ENST00000418310 CYP3A7-CYP3A51PA0A087WV96 503 aa12.91□□□□□ -0.34
LIMK1-202ENST00000418310 K7ENM7 598 aa12.91□□□□□ -0.34
LIMK1-202ENST00000418310 CYP3A7P24462 503 aa12.91□□□□□ -0.34
LIMK1-202ENST00000418310 SOX5P35711 763 aa12.91□□□□□ -0.34
LIMK1-202ENST00000418310 SLCO1A2P46721 670 aa12.91□□□□□ -0.34
LIMK1-202ENST00000418310 MAGOHP61326 146 aaKnown RBP12.91□□□□□ -0.34
LIMK1-202ENST00000418310 MYL7Q01449 175 aa12.91□□□□□ -0.34
LIMK1-202ENST00000418310 NBPF9Q3BBW0 867 aa12.91□□□□□ -0.34
LIMK1-202ENST00000418310 UBAP2Q5T6F2 1119 aaKnown RBP12.91□□□□□ -0.34
LIMK1-202ENST00000418310 CPXCR1Q8N123 301 aa12.91□□□□□ -0.34
LIMK1-202ENST00000418310 MAGOHBQ96A72 148 aaKnown RBP12.91□□□□□ -0.34
LIMK1-202ENST00000418310 CCT8L2Q96SF2 557 aa12.91□□□□□ -0.34
LIMK1-202ENST00000418310 ZNF577Q9BSK1 485 aa12.91□□□□□ -0.34
LIMK1-202ENST00000418310 INTS2Q9H0H0 1204 aaKnown RBP12.91□□□□□ -0.34
LIMK1-202ENST00000418310 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.91□□□□□ -0.34
LIMK1-202ENST00000418310 METTL14Q9HCE5 456 aaKnown RBP12.91□□□□□ -0.34
LIMK1-202ENST00000418310 UBE2TQ9NPD8 197 aaPredicted RBP12.91□□□□□ -0.34
LIMK1-202ENST00000418310 FOXN3O00409 490 aaPredicted RBP12.91□□□□□ -0.34
LIMK1-202ENST00000418310 ZNF844Q08AG5 666 aa12.91□□□□□ -0.34
LIMK1-202ENST00000418310 MESDQ14696 234 aa12.91□□□□□ -0.34
LIMK1-202ENST00000418310 NSMFQ6X4W1 530 aa12.91□□□□□ -0.34
LIMK1-202ENST00000418310 CCDC25Q86WR0 208 aa12.91□□□□□ -0.34
LIMK1-202ENST00000418310 SCFD2Q8WU76 684 aa12.91□□□□□ -0.34
LIMK1-202ENST00000418310 PBKQ96KB5 322 aa12.91□□□□□ -0.34
LIMK1-202ENST00000418310 ZMYM2Q9UBW7 1377 aa12.91□□□□□ -0.34
LIMK1-202ENST00000418310 ARHGEF35A5YM69 484 aa12.9□□□□□ -0.34
LIMK1-202ENST00000418310 MDH1P40925 334 aaKnown RBP12.9□□□□□ -0.34
LIMK1-202ENST00000418310 STAT2P52630 851 aa12.9□□□□□ -0.34
LIMK1-202ENST00000418310 PTGISQ16647 500 aa12.9□□□□□ -0.34
LIMK1-202ENST00000418310 NLRP14Q86W24 1093 aa12.9□□□□□ -0.34
LIMK1-202ENST00000418310 FAM20AQ96MK3 541 aa12.9□□□□□ -0.34
LIMK1-202ENST00000418310 SELENOSQ9BQE4 189 aa12.9□□□□□ -0.34
LIMK1-202ENST00000418310 GLIS2Q9BZE0 524 aaPredicted RBP12.9□□□□□ -0.34
LIMK1-202ENST00000418310 GLT8D2Q9H1C3 349 aa12.9□□□□□ -0.34
LIMK1-202ENST00000418310 UTP11Q9Y3A2 253 aaKnown RBP12.9□□□□□ -0.34
LIMK1-202ENST00000418310 BZW2Q9Y6E2 419 aaKnown RBP12.9□□□□□ -0.34
LIMK1-202ENST00000418310 ARFGEF1Q9Y6D6 1849 aa12.9□□□□□ -0.34
LIMK1-202ENST00000418310 FERP16591 822 aa12.9□□□□□ -0.34
LIMK1-202ENST00000418310 TNFRSF8P28908 595 aa12.9□□□□□ -0.34
LIMK1-202ENST00000418310 DGKZQ13574 1117 aa12.9□□□□□ -0.34
LIMK1-202ENST00000418310 Q4G0T1 1027 aa12.9□□□□□ -0.34
LIMK1-202ENST00000418310 DCAF12L1Q5VU92 463 aa12.9□□□□□ -0.34
LIMK1-202ENST00000418310 KDM7AQ6ZMT4 941 aa12.9□□□□□ -0.34
LIMK1-202ENST00000418310 OTOP1Q7RTM1 612 aa12.9□□□□□ -0.34
LIMK1-202ENST00000418310 KRT35Q92764 455 aa12.9□□□□□ -0.34
LIMK1-202ENST00000418310 CCDC127Q96BQ5 260 aa12.9□□□□□ -0.34
LIMK1-202ENST00000418310 ZDHHC15Q96MV8 337 aa12.9□□□□□ -0.34
LIMK1-202ENST00000418310 LXNQ9BS40 222 aa12.9□□□□□ -0.34
LIMK1-202ENST00000418310 AGPAT3Q9NRZ7 376 aa12.9□□□□□ -0.34
LIMK1-202ENST00000418310 DNAJC17Q9NVM6 304 aaKnown RBP12.9□□□□□ -0.34
LIMK1-202ENST00000418310 CNOT8Q9UFF9 292 aaKnown RBP12.9□□□□□ -0.34
LIMK1-202ENST00000418310 SKOR1P84550 965 aa12.9□□□□□ -0.34
LIMK1-202ENST00000418310 ITGB3BPQ13352 177 aaPredicted RBP12.9□□□□□ -0.34
LIMK1-202ENST00000418310 PHLDB3Q6NSJ2 640 aa12.9□□□□□ -0.34
LIMK1-202ENST00000418310 COL23A1Q86Y22 540 aaPredicted RBP12.9□□□□□ -0.34
LIMK1-202ENST00000418310 MYCBPAPQ8TBZ2 947 aa12.9□□□□□ -0.34
LIMK1-202ENST00000418310 CRYGNQ8WXF5 182 aa12.9□□□□□ -0.34
LIMK1-202ENST00000418310 ALG3Q92685 438 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms