RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 SLCO1A2P46721 670 aa8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 POLE2P56282 527 aa8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 ZC3H6P61129 1189 aaKnown RBP8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 MKRN3Q13064 507 aaKnown RBP8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 ACVR2BQ13705 512 aa8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 ZNF571Q7Z3V5 609 aaPredicted RBP8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 IRF2BP2Q7Z5L9 587 aa8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 SH3TC2Q8TF17 1288 aa8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 NUDCD1Q96RS6 583 aa8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 NLRP2Q9NX02 1062 aa8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 KLHL14Q9P2G3 628 aa8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 PCDHA6Q9UN73 950 aa8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 PCDHA8Q9Y5H6 950 aa8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 MYMKA6NI61 221 aa8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 ATP5HO75947 161 aa8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 AFPP02771 609 aaKnown RBP8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 OR52Z1P0C646 297 aa8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 FKBP3Q00688 224 aaKnown RBP8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 DHX34Q14147 1143 aaKnown RBP8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 ZCWPW2Q504Y3 356 aa8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 KIAA1755Q5JYT7 1200 aa8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 UBAP2Q5T6F2 1119 aaKnown RBP8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 SV2BQ7L1I2 683 aa8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 RBBP8NLQ8NC74 664 aaPredicted RBP8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 FAM13CQ8NE31 585 aa8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 CKAP2Q8WWK9 683 aa8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 FGD4Q96M96 766 aa8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 TMEM237Q96Q45 408 aa8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 MMTAG2Q9BU76 263 aaKnown RBP8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 DBR1Q9UK59 544 aaKnown RBP8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 BZW2Q9Y6E2 419 aaKnown RBP8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 TMEM120BA0PK00 339 aa8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 FGRP09769 529 aa8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 PCP11498 1178 aaKnown RBP8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 IMPDH2P12268 514 aa8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 CGB2Q6NT52 195 aa8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 ALKBH5Q6P6C2 394 aaKnown RBP8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 BARGINQ6ZT62 677 aa8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 ECHDC2Q86YB7 292 aa8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 MGARPQ8TDB4 240 aa8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 MAIP1Q8WWC4 291 aa8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 GPKOWQ92917 476 aaPredicted RBP eCLIP8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 GRHL1Q9NZI5 618 aa8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 NENFQ9UMX5 172 aa8.67□□□□□ -1.02
HMGXB4-202ENST00000418170 RIPK2O43353 540 aa8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 RXRBP28702 533 aa8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 NPEPPSP55786 919 aa8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 CHRNA2Q15822 529 aa8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 FOXB2Q5VYV0 432 aa8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 JAMLQ86YT9 394 aa8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 DAGLBQ8NCG7 672 aa8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 PHC3Q8NDX5 983 aa8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 INPP5DQ92835 1189 aa8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 GLG1Q92896 1179 aa8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 NAP1L3Q99457 506 aaPredicted RBP8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 CTTNBP2NLQ9P2B4 639 aa8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 SCOCQ9UIL1 159 aa8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 SNX24Q9Y343 169 aa8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 MROH7Q68CQ1 1323 aa8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 CTSWP56202 376 aa8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 MAPK7Q13164 816 aa8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 WASHC2DQ5SRD0 308 aa8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 VSTM1Q6UX27 236 aa8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 TOM1L2Q6ZVM7 507 aa8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 SESTD1Q86VW0 696 aa8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 TRIM59Q8IWR1 403 aa8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 SYNE4Q8N205 404 aa8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 CALML4Q96GE6 196 aa8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 ROPN1BQ9BZX4 212 aaPredicted RBP8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 ROPN1Q9HAT0 212 aaPredicted RBP8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 BLOC1S4Q9NUP1 217 aa8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 DIS3Q9Y2L1 958 aaKnown RBP8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 LRCH1Q9Y2L9 728 aa8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 MARSP56192 900 aaKnown RBP8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 MUM1Q2TAK8 710 aa8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 LONP2Q86WA8 852 aa8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 DNAAF5Q86Y56 855 aa8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 CFAP61Q8NHU2 1237 aa8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 ZNF333Q96JL9 665 aa8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 DDX23Q9BUQ8 820 aaKnown RBP8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 STK17AQ9UEE5 414 aa8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 LY75O60449 1722 aa8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 LRP5O75197 1615 aa8.66□□□□□ -1.02
HMGXB4-202ENST00000418170 SIGLEC16A6NMB1 481 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 EYA4O95677 639 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 ANXA13P27216 316 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 PSMC4P43686 418 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 RNASELQ05823 741 aaKnown RBP8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 MTFR1Q15390 333 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 DCAF12L1Q5VU92 463 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 NCAPG2Q86XI2 1143 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 RBM12BQ8IXT5 1001 aaKnown RBP8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 GLIS3Q8NEA6 775 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 UHMK1Q8TAS1 419 aaKnown RBP8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 UCMAQ8WVF2 138 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 GRAMD1AQ96CP6 724 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 CEP63Q96MT8 703 aa8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 UBE2OQ9C0C9 1292 aaKnown RBP8.65□□□□□ -1.02
HMGXB4-202ENST00000418170 ERVK-5Q9HDB9 667 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms