RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 ALAS2P22557 587 aa6.5□□□□□ -1.37
ECHDC1-206ENST00000417628 CDC25BP30305 580 aa6.5□□□□□ -1.37
ECHDC1-206ENST00000417628 ETFBP38117 255 aa6.5□□□□□ -1.37
ECHDC1-206ENST00000417628 RRP1P56182 461 aaKnown RBP6.5□□□□□ -1.37
ECHDC1-206ENST00000417628 DEFB103AP81534 67 aa6.5□□□□□ -1.37
ECHDC1-206ENST00000417628 LRRC14Q15048 493 aa6.5□□□□□ -1.37
ECHDC1-206ENST00000417628 EPC2Q52LR7 807 aa6.5□□□□□ -1.37
ECHDC1-206ENST00000417628 SEZ6Q53EL9 994 aa6.5□□□□□ -1.37
ECHDC1-206ENST00000417628 CAVIN4Q5BKX8 364 aa6.5□□□□□ -1.37
ECHDC1-206ENST00000417628 KANK3Q6NY19 840 aa6.5□□□□□ -1.37
ECHDC1-206ENST00000417628 LLGL2Q6P1M3 1020 aa6.5□□□□□ -1.37
ECHDC1-206ENST00000417628 CREBRFQ8IUR6 639 aa6.5□□□□□ -1.37
ECHDC1-206ENST00000417628 CACTIN-AS1Q8N1I8 211 aa6.5□□□□□ -1.37
ECHDC1-206ENST00000417628 IL22RA1Q8N6P7 574 aa6.5□□□□□ -1.37
ECHDC1-206ENST00000417628 SUMF1Q8NBK3 374 aa6.5□□□□□ -1.37
ECHDC1-206ENST00000417628 FLCNQ8NFG4 579 aa6.5□□□□□ -1.37
ECHDC1-206ENST00000417628 SIL1Q9H173 461 aa6.5□□□□□ -1.37
ECHDC1-206ENST00000417628 PIF1Q9H611 641 aa6.5□□□□□ -1.37
ECHDC1-206ENST00000417628 DDX4Q9NQI0 724 aaKnown RBP6.5□□□□□ -1.37
ECHDC1-206ENST00000417628 GDF2Q9UK05 429 aaPredicted RBP6.5□□□□□ -1.37
ECHDC1-206ENST00000417628 USP18Q9UMW8 372 aa6.5□□□□□ -1.37
ECHDC1-206ENST00000417628 SORCS3Q9UPU3 1222 aa6.5□□□□□ -1.37
ECHDC1-206ENST00000417628 USP15Q9Y4E8 981 aaPredicted RBP6.5□□□□□ -1.37
ECHDC1-206ENST00000417628 NAV2Q8IVL1 2488 aa6.49□□□□□ -1.37
ECHDC1-206ENST00000417628 SPTBN2O15020 2390 aa6.49□□□□□ -1.37
ECHDC1-206ENST00000417628 FSD2A1L4K1 749 aa6.49□□□□□ -1.37
ECHDC1-206ENST00000417628 EIF4E1BA6NMX2 242 aaKnown RBP6.49□□□□□ -1.37
ECHDC1-206ENST00000417628 DYNC1I1O14576 645 aa6.49□□□□□ -1.37
ECHDC1-206ENST00000417628 SLC30A4O14863 429 aa6.49□□□□□ -1.37
ECHDC1-206ENST00000417628 LINC01565O15544 149 aa6.49□□□□□ -1.37
ECHDC1-206ENST00000417628 SMARCA5O60264 1052 aaPredicted RBP6.49□□□□□ -1.37
ECHDC1-206ENST00000417628 DDX58O95786 925 aaKnown RBP6.49□□□□□ -1.37
ECHDC1-206ENST00000417628 IGKV5-2P06315 115 aa6.49□□□□□ -1.37
ECHDC1-206ENST00000417628 SUPT20HL2P0C7V6 817 aa6.49□□□□□ -1.37
ECHDC1-206ENST00000417628 ATF7P17544 494 aaPredicted RBP6.49□□□□□ -1.37
ECHDC1-206ENST00000417628 AFF1P51825 1210 aaKnown RBP6.49□□□□□ -1.37
ECHDC1-206ENST00000417628 GJA9P57773 515 aa6.49□□□□□ -1.37
ECHDC1-206ENST00000417628 SRSF11Q05519 484 aaKnown RBP6.49□□□□□ -1.37
ECHDC1-206ENST00000417628 NFX1Q12986 1120 aaKnown RBP6.49□□□□□ -1.37
ECHDC1-206ENST00000417628 COASYQ13057 564 aa6.49□□□□□ -1.37
ECHDC1-206ENST00000417628 RRP1BQ14684 758 aaKnown RBP6.49□□□□□ -1.37
ECHDC1-206ENST00000417628 LDHAL6AQ6ZMR3 332 aa6.49□□□□□ -1.37
ECHDC1-206ENST00000417628 CATSPERGQ6ZRH7 1159 aa6.49□□□□□ -1.37
ECHDC1-206ENST00000417628 EGFL6Q8IUX8 553 aa6.49□□□□□ -1.37
ECHDC1-206ENST00000417628 NETO1Q8TDF5 533 aa6.49□□□□□ -1.37
ECHDC1-206ENST00000417628 C12orf42Q96LP6 360 aa6.49□□□□□ -1.37
ECHDC1-206ENST00000417628 RTP3Q9BQQ7 232 aa6.49□□□□□ -1.37
ECHDC1-206ENST00000417628 CCDC94Q9BW85 323 aaPredicted RBP6.49□□□□□ -1.37
ECHDC1-206ENST00000417628 EMILIN2Q9BXX0 1053 aa6.49□□□□□ -1.37
ECHDC1-206ENST00000417628 SPATC1LQ9H0A9 340 aa6.49□□□□□ -1.37
ECHDC1-206ENST00000417628 MROH8Q9H579 483 aa6.49□□□□□ -1.37
ECHDC1-206ENST00000417628 SOX17Q9H6I2 414 aaPredicted RBP6.49□□□□□ -1.37
ECHDC1-206ENST00000417628 PHAXQ9H814 394 aaKnown RBP6.49□□□□□ -1.37
ECHDC1-206ENST00000417628 CBX8Q9HC52 389 aa6.49□□□□□ -1.37
ECHDC1-206ENST00000417628 JPH1Q9HDC5 661 aaPredicted RBP6.49□□□□□ -1.37
ECHDC1-206ENST00000417628 CNNM1Q9NRU3 951 aa6.49□□□□□ -1.37
ECHDC1-206ENST00000417628 CACNA2D2Q9NY47 1150 aa6.49□□□□□ -1.37
ECHDC1-206ENST00000417628 ZHX1Q9UKY1 873 aaPredicted RBP6.49□□□□□ -1.37
ECHDC1-206ENST00000417628 STRIP2Q9ULQ0 834 aa6.49□□□□□ -1.37
ECHDC1-206ENST00000417628 MRVI1Q9Y6F6 885 aa6.49□□□□□ -1.37
ECHDC1-206ENST00000417628 PTPRSQ13332 1948 aa6.48□□□□□ -1.37
ECHDC1-206ENST00000417628 SPEGQ15772 3267 aa6.48□□□□□ -1.37
ECHDC1-206ENST00000417628 TANC1Q9C0D5 1861 aa6.48□□□□□ -1.37
ECHDC1-206ENST00000417628 LINC01387J3KSC0 135 aa6.48□□□□□ -1.37
ECHDC1-206ENST00000417628 KINO60870 393 aaKnown RBP6.48□□□□□ -1.37
ECHDC1-206ENST00000417628 GSTP1P09211 210 aaKnown RBP6.48□□□□□ -1.37
ECHDC1-206ENST00000417628 CYP2C9P11712 490 aa6.48□□□□□ -1.37
ECHDC1-206ENST00000417628 FCER1AP12319 257 aa6.48□□□□□ -1.37
ECHDC1-206ENST00000417628 SELPP16109 830 aa6.48□□□□□ -1.37
ECHDC1-206ENST00000417628 NEXNQ0ZGT2 675 aa6.48□□□□□ -1.37
ECHDC1-206ENST00000417628 ADAM15Q13444 863 aa6.48□□□□□ -1.37
ECHDC1-206ENST00000417628 MPP2Q14168 576 aa6.48□□□□□ -1.37
ECHDC1-206ENST00000417628 GCKRQ14397 625 aa6.48□□□□□ -1.37
ECHDC1-206ENST00000417628 DNTTIP2Q5QJE6 756 aaKnown RBP6.48□□□□□ -1.37
ECHDC1-206ENST00000417628 TXNDC11Q6PKC3 985 aa6.48□□□□□ -1.37
ECHDC1-206ENST00000417628 CXCL17Q6UXB2 119 aa6.48□□□□□ -1.37
ECHDC1-206ENST00000417628 C8orf86Q6ZUL3 223 aa6.48□□□□□ -1.37
ECHDC1-206ENST00000417628 WDR66Q8TBY9 1149 aa6.48□□□□□ -1.37
ECHDC1-206ENST00000417628 RIN2Q8WYP3 895 aaPredicted RBP6.48□□□□□ -1.37
ECHDC1-206ENST00000417628 DDX1Q92499 740 aaKnown RBP6.48□□□□□ -1.37
ECHDC1-206ENST00000417628 SHDQ96IW2 340 aa6.48□□□□□ -1.37
ECHDC1-206ENST00000417628 FEZ1Q99689 392 aa6.48□□□□□ -1.37
ECHDC1-206ENST00000417628 NRSN2Q9GZP1 204 aa6.48□□□□□ -1.37
ECHDC1-206ENST00000417628 ALDH8A1Q9H2A2 487 aaPredicted RBP6.48□□□□□ -1.37
ECHDC1-206ENST00000417628 RAI14Q9P0K7 980 aa6.48□□□□□ -1.37
ECHDC1-206ENST00000417628 PPT2Q9UMR5 302 aa6.48□□□□□ -1.37
ECHDC1-206ENST00000417628 DIS3Q9Y2L1 958 aaKnown RBP6.48□□□□□ -1.37
ECHDC1-206ENST00000417628 MAP3K2Q9Y2U5 619 aa6.48□□□□□ -1.37
ECHDC1-206ENST00000417628 PPME1Q9Y570 386 aa6.48□□□□□ -1.37
ECHDC1-206ENST00000417628 INSL6Q9Y581 213 aa6.48□□□□□ -1.37
ECHDC1-206ENST00000417628 MROH5Q6ZUA9 1318 aa6.48□□□□□ -1.37
ECHDC1-206ENST00000417628 TERTO14746 1132 aaKnown RBP6.47□□□□□ -1.37
ECHDC1-206ENST00000417628 TM4SF5O14894 197 aa6.47□□□□□ -1.37
ECHDC1-206ENST00000417628 PI15O43692 258 aa6.47□□□□□ -1.37
ECHDC1-206ENST00000417628 ECEL1O95672 775 aa6.47□□□□□ -1.37
ECHDC1-206ENST00000417628 APPP05067 770 aa6.47□□□□□ -1.37
ECHDC1-206ENST00000417628 IQCF3P0C7M6 154 aa6.47□□□□□ -1.37
ECHDC1-206ENST00000417628 VCAM1P19320 739 aa6.47□□□□□ -1.37
ECHDC1-206ENST00000417628 PRDX5P30044 214 aa6.47□□□□□ -1.37
ECHDC1-206ENST00000417628 GSTM4Q03013 218 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms