RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 M0QZ92 97 aa20.36■□□□□ 0.85
VCP-202ENST00000417448 ITGB5P18084 799 aa20.36■□□□□ 0.85
VCP-202ENST00000417448 CLCN5P51795 746 aa20.36■□□□□ 0.85
VCP-202ENST00000417448 ADCY7P51828 1080 aa20.36■□□□□ 0.85
VCP-202ENST00000417448 CPLX2Q6PUV4 134 aaKnown RBP20.36■□□□□ 0.85
VCP-202ENST00000417448 NLRX1Q86UT6 975 aa20.36■□□□□ 0.85
VCP-202ENST00000417448 TRIM22Q8IYM9 498 aa20.36■□□□□ 0.85
VCP-202ENST00000417448 RMDN1Q96DB5 314 aa20.36■□□□□ 0.85
VCP-202ENST00000417448 ERVK-5Q9HDB9 667 aa20.36■□□□□ 0.85
VCP-202ENST00000417448 ENTPD7Q9NQZ7 604 aa20.36■□□□□ 0.85
VCP-202ENST00000417448 LZTS1Q9Y250 596 aa20.36■□□□□ 0.85
VCP-202ENST00000417448 PCDHA2Q9Y5H9 948 aa20.36■□□□□ 0.85
VCP-202ENST00000417448 EVPLQ92817 2033 aa20.36■□□□□ 0.85
VCP-202ENST00000417448 WEE2P0C1S8 567 aa20.35■□□□□ 0.85
VCP-202ENST00000417448 FGFR1P11362 822 aa20.35■□□□□ 0.85
VCP-202ENST00000417448 FDPSP14324 419 aaKnown RBP20.35■□□□□ 0.85
VCP-202ENST00000417448 PLCB3Q01970 1234 aa20.35■□□□□ 0.85
VCP-202ENST00000417448 NFX1Q12986 1120 aaKnown RBP20.35■□□□□ 0.85
VCP-202ENST00000417448 JAKMIP3Q5VZ66 844 aa20.35■□□□□ 0.85
VCP-202ENST00000417448 XRRA1Q6P2D8 792 aa20.35■□□□□ 0.85
VCP-202ENST00000417448 NSUN7Q8NE18 718 aaKnown RBP20.35■□□□□ 0.85
VCP-202ENST00000417448 TMEM40Q8WWA1 233 aa20.35■□□□□ 0.85
VCP-202ENST00000417448 GPRASP2Q96D09 838 aa20.35■□□□□ 0.85
VCP-202ENST00000417448 ADAM2Q99965 735 aa20.35■□□□□ 0.85
VCP-202ENST00000417448 ADAM7Q9H2U9 754 aa20.35■□□□□ 0.85
VCP-202ENST00000417448 CDHR5Q9HBB8 845 aa20.35■□□□□ 0.85
VCP-202ENST00000417448 RIC8AQ9NPQ8 531 aa20.35■□□□□ 0.85
VCP-202ENST00000417448 RGS18Q9NS28 235 aa20.35■□□□□ 0.85
VCP-202ENST00000417448 HCFC2Q9Y5Z7 792 aa20.35■□□□□ 0.85
VCP-202ENST00000417448 C9IYK1 514 aa20.34■□□□□ 0.85
VCP-202ENST00000417448 PIK3CDO00329 1044 aa20.34■□□□□ 0.85
VCP-202ENST00000417448 PI15O43692 258 aa20.34■□□□□ 0.85
VCP-202ENST00000417448 PBX3P40426 434 aa20.34■□□□□ 0.85
VCP-202ENST00000417448 KRT76Q01546 638 aa20.34■□□□□ 0.85
VCP-202ENST00000417448 NECTIN4Q96NY8 510 aa20.34■□□□□ 0.85
VCP-202ENST00000417448 MFSD1Q9H3U5 465 aa20.34■□□□□ 0.85
VCP-202ENST00000417448 ORC3Q9UBD5 711 aaPredicted RBP20.34■□□□□ 0.85
VCP-202ENST00000417448 PCDHA6Q9UN73 950 aa20.34■□□□□ 0.85
VCP-202ENST00000417448 KCNJ14Q9UNX9 436 aa20.34■□□□□ 0.85
VCP-202ENST00000417448 NOC2LQ9Y3T9 749 aaKnown RBP20.34■□□□□ 0.85
VCP-202ENST00000417448 PCDHA8Q9Y5H6 950 aa20.34■□□□□ 0.85
VCP-202ENST00000417448 ZFHX4Q86UP3 3567 aa20.34■□□□□ 0.85
VCP-202ENST00000417448 SMIM35A0A1B0GVV1 85 aa20.33■□□□□ 0.85
VCP-202ENST00000417448 DEXIO95424 95 aa20.33■□□□□ 0.85
VCP-202ENST00000417448 NPR3P17342 541 aa20.33■□□□□ 0.85
VCP-202ENST00000417448 LAG3P18627 525 aa20.33■□□□□ 0.85
VCP-202ENST00000417448 PLCB4Q15147 1175 aa20.33■□□□□ 0.85
VCP-202ENST00000417448 PPP1R18Q6NYC8 613 aa20.33■□□□□ 0.85
VCP-202ENST00000417448 LRRC55Q6ZSA7 311 aa20.33■□□□□ 0.85
VCP-202ENST00000417448 FLCNQ8NFG4 579 aa20.33■□□□□ 0.85
VCP-202ENST00000417448 FEZF2Q8TBJ5 459 aa20.33■□□□□ 0.85
VCP-202ENST00000417448 CASP10Q92851 521 aa20.33■□□□□ 0.85
VCP-202ENST00000417448 NGRNQ9NPE2 291 aaKnown RBP20.33■□□□□ 0.85
VCP-202ENST00000417448 LIMD1Q9UGP4 676 aa20.33■□□□□ 0.85
VCP-202ENST00000417448 CDKL5O76039 1030 aa20.32■□□□□ 0.84
VCP-202ENST00000417448 ITIH3Q06033 890 aa20.32■□□□□ 0.84
VCP-202ENST00000417448 ANGPT1Q15389 498 aa20.32■□□□□ 0.84
VCP-202ENST00000417448 TPRNQ4KMQ1 711 aa20.32■□□□□ 0.84
VCP-202ENST00000417448 CES5AQ6NT32 575 aa20.32■□□□□ 0.84
VCP-202ENST00000417448 SLC24A5Q71RS6 500 aa20.32■□□□□ 0.84
VCP-202ENST00000417448 CCDC105Q8IYK2 499 aa20.32■□□□□ 0.84
VCP-202ENST00000417448 C1orf112Q9NSG2 853 aa20.32■□□□□ 0.84
VCP-202ENST00000417448 GINS2Q9Y248 185 aa20.32■□□□□ 0.84
VCP-202ENST00000417448 TPRP12270 2363 aaKnown RBP20.32■□□□□ 0.84
VCP-202ENST00000417448 OTOGLQ3ZCN5 2332 aa20.32■□□□□ 0.84
VCP-202ENST00000417448 DENND3A2RUS2 1198 aa20.31■□□□□ 0.84
VCP-202ENST00000417448 SPDYE3A6NKU9 549 aa20.31■□□□□ 0.84
VCP-202ENST00000417448 hCG_1984214I3L0E3 225 aa20.31■□□□□ 0.84
VCP-202ENST00000417448 RPS6KA5O75582 802 aa20.31■□□□□ 0.84
VCP-202ENST00000417448 AOC1P19801 751 aa20.31■□□□□ 0.84
VCP-202ENST00000417448 NLRP5P59047 1200 aa20.31■□□□□ 0.84
VCP-202ENST00000417448 MTMR1Q13613 665 aa20.31■□□□□ 0.84
VCP-202ENST00000417448 KANK3Q6NY19 840 aa20.31■□□□□ 0.84
VCP-202ENST00000417448 MTHFD1LQ6UB35 978 aa20.31■□□□□ 0.84
VCP-202ENST00000417448 ZDHHC14Q8IZN3 488 aa20.31■□□□□ 0.84
VCP-202ENST00000417448 ZNF713Q8N859 430 aaPredicted RBP20.31■□□□□ 0.84
VCP-202ENST00000417448 TDRD5Q8NAT2 981 aaKnown RBP20.31■□□□□ 0.84
VCP-202ENST00000417448 CDHR1Q96JP9 859 aa20.31■□□□□ 0.84
VCP-202ENST00000417448 ZSCAN31Q96LW9 406 aaPredicted RBP20.31■□□□□ 0.84
VCP-202ENST00000417448 ZMYND12Q9H0C1 365 aa20.31■□□□□ 0.84
VCP-202ENST00000417448 C6orf50Q9HD87 102 aa20.31■□□□□ 0.84
VCP-202ENST00000417448 RNF19AQ9NV58 838 aa20.31■□□□□ 0.84
VCP-202ENST00000417448 PUF60Q9UHX1 559 aaKnown RBP20.31■□□□□ 0.84
VCP-202ENST00000417448 ST3GAL5Q9UNP4 418 aa20.31■□□□□ 0.84
VCP-202ENST00000417448 UBIAD1Q9Y5Z9 338 aa20.31■□□□□ 0.84
VCP-202ENST00000417448 CLK2P49760 499 aaKnown RBP20.3■□□□□ 0.84
VCP-202ENST00000417448 KCNT2Q6UVM3 1135 aa20.3■□□□□ 0.84
VCP-202ENST00000417448 NME8Q8N427 588 aa20.3■□□□□ 0.84
VCP-202ENST00000417448 C12orf76Q8N812 135 aaPredicted RBP20.3■□□□□ 0.84
VCP-202ENST00000417448 ANO3Q9BYT9 981 aa20.3■□□□□ 0.84
VCP-202ENST00000417448 JPH1Q9HDC5 661 aaPredicted RBP20.3■□□□□ 0.84
VCP-202ENST00000417448 TMEM161AQ9NX61 479 aa20.3■□□□□ 0.84
VCP-202ENST00000417448 C2orf16Q68DN1 1984 aa20.3■□□□□ 0.84
VCP-202ENST00000417448 STK36Q9NRP7 1315 aa20.29■□□□□ 0.84
VCP-202ENST00000417448 C2orf71A6NGG8 1288 aa20.29■□□□□ 0.84
VCP-202ENST00000417448 CLASP2O75122 1294 aaKnown RBP20.29■□□□□ 0.84
VCP-202ENST00000417448 KRT37O76014 449 aa20.29■□□□□ 0.84
VCP-202ENST00000417448 MTHFRP42898 656 aa20.29■□□□□ 0.84
VCP-202ENST00000417448 FAM189BP81408 668 aa20.29■□□□□ 0.84
VCP-202ENST00000417448 RARS2Q5T160 578 aaKnown RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms