RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 ZKSCAN5Q9Y2L8 839 aa18.7■□□□□ 0.58
CALD1-204ENST00000417172 CCDC169A6NNP5 214 aa18.69■□□□□ 0.58
CALD1-204ENST00000417172 PDXKO00764 312 aa18.69■□□□□ 0.58
CALD1-204ENST00000417172 HOXC6P09630 235 aa18.69■□□□□ 0.58
CALD1-204ENST00000417172 IRX5P78411 483 aaPredicted RBP18.69■□□□□ 0.58
CALD1-204ENST00000417172 UBXN1Q04323 297 aa18.69■□□□□ 0.58
CALD1-204ENST00000417172 ADAM9Q13443 819 aa18.69■□□□□ 0.58
CALD1-204ENST00000417172 PLCB4Q15147 1175 aa18.69■□□□□ 0.58
CALD1-204ENST00000417172 SPECC1LQ69YQ0 1117 aa18.69■□□□□ 0.58
CALD1-204ENST00000417172 HAUS6Q7Z4H7 955 aa18.69■□□□□ 0.58
CALD1-204ENST00000417172 ZC3H3Q8IXZ2 948 aaKnown RBP18.69■□□□□ 0.58
CALD1-204ENST00000417172 DHX33Q9H6R0 707 aaKnown RBP18.69■□□□□ 0.58
CALD1-204ENST00000417172 LGALS16A8MUM7 142 aa18.68■□□□□ 0.58
CALD1-204ENST00000417172 ESPNB1AK53 854 aa18.68■□□□□ 0.58
CALD1-204ENST00000417172 ZBTB42B2RXF5 422 aa18.68■□□□□ 0.58
CALD1-204ENST00000417172 NR3C1P04150 777 aa18.68■□□□□ 0.58
CALD1-204ENST00000417172 NCKAP1LP55160 1127 aa18.68■□□□□ 0.58
CALD1-204ENST00000417172 DRP2Q13474 957 aa18.68■□□□□ 0.58
CALD1-204ENST00000417172 LAMC2Q13753 1193 aa18.68■□□□□ 0.58
CALD1-204ENST00000417172 EDRF1Q3B7T1 1238 aa18.68■□□□□ 0.58
CALD1-204ENST00000417172 DUSP28Q4G0W2 176 aa18.68■□□□□ 0.58
CALD1-204ENST00000417172 FOXR2Q6PJQ5 311 aa18.68■□□□□ 0.58
CALD1-204ENST00000417172 ZSCAN30Q86W11 494 aa18.68■□□□□ 0.58
CALD1-204ENST00000417172 LRRC8AQ8IWT6 810 aa18.68■□□□□ 0.58
CALD1-204ENST00000417172 NOC4LQ9BVI4 516 aaKnown RBP18.68■□□□□ 0.58
CALD1-204ENST00000417172 IMPACTQ9P2X3 320 aa18.68■□□□□ 0.58
CALD1-204ENST00000417172 PYCARDQ9ULZ3 195 aa18.68■□□□□ 0.58
CALD1-204ENST00000417172 GABRQQ9UN88 632 aa18.68■□□□□ 0.58
CALD1-204ENST00000417172 LGALS2P05162 132 aa18.68■□□□□ 0.58
CALD1-204ENST00000417172 RGS2P41220 211 aa18.68■□□□□ 0.58
CALD1-204ENST00000417172 PSMC4P43686 418 aa18.68■□□□□ 0.58
CALD1-204ENST00000417172 CASP4P49662 377 aa18.68■□□□□ 0.58
CALD1-204ENST00000417172 APLP1P51693 650 aa18.68■□□□□ 0.58
CALD1-204ENST00000417172 TBX2Q13207 712 aaPredicted RBP18.68■□□□□ 0.58
CALD1-204ENST00000417172 DMP1Q13316 513 aaPredicted RBP18.68■□□□□ 0.58
CALD1-204ENST00000417172 PPP4R3CPQ6ZMV5 832 aa18.68■□□□□ 0.58
CALD1-204ENST00000417172 PLPPR4Q7Z2D5 763 aa18.68■□□□□ 0.58
CALD1-204ENST00000417172 MCPH1Q8NEM0 835 aa18.68■□□□□ 0.58
CALD1-204ENST00000417172 PPTC7Q8NI37 304 aa18.68■□□□□ 0.58
CALD1-204ENST00000417172 KIFAP3Q92845 792 aa18.68■□□□□ 0.58
CALD1-204ENST00000417172 APBA2Q99767 749 aa18.68■□□□□ 0.58
CALD1-204ENST00000417172 RNPEPQ9H4A4 650 aa18.68■□□□□ 0.58
CALD1-204ENST00000417172 NRBP2Q9NSY0 501 aa18.68■□□□□ 0.58
CALD1-204ENST00000417172 PCDHB13Q9Y5F0 798 aa18.68■□□□□ 0.58
CALD1-204ENST00000417172 CALUO43852 315 aaPredicted RBP18.67■□□□□ 0.58
CALD1-204ENST00000417172 KLK7P49862 253 aa18.67■□□□□ 0.58
CALD1-204ENST00000417172 LACTBP83111 547 aaPredicted RBP18.67■□□□□ 0.58
CALD1-204ENST00000417172 CCDC40Q4G0X9 1142 aa18.67■□□□□ 0.58
CALD1-204ENST00000417172 OLFML2BQ68BL8 750 aa18.67■□□□□ 0.58
CALD1-204ENST00000417172 C17orf53Q8N3J3 647 aaPredicted RBP18.67■□□□□ 0.58
CALD1-204ENST00000417172 TMEM161BQ8NDZ6 487 aa18.67■□□□□ 0.58
CALD1-204ENST00000417172 OR6J1Q8NGC5 347 aa18.67■□□□□ 0.58
CALD1-204ENST00000417172 ASAP3Q8TDY4 903 aa18.67■□□□□ 0.58
CALD1-204ENST00000417172 ATP8B4Q8TF62 1192 aa18.67■□□□□ 0.58
CALD1-204ENST00000417172 CEP63Q96MT8 703 aa18.67■□□□□ 0.58
CALD1-204ENST00000417172 TRPC6Q9Y210 931 aa18.67■□□□□ 0.58
CALD1-204ENST00000417172 BRCA2P51587 3418 aa18.67■□□□□ 0.58
CALD1-204ENST00000417172 UBE4BO95155 1302 aa18.67■□□□□ 0.58
CALD1-204ENST00000417172 AKAP3O75969 853 aa18.66■□□□□ 0.58
CALD1-204ENST00000417172 FGFR1OPO95684 399 aaKnown RBP18.66■□□□□ 0.58
CALD1-204ENST00000417172 ZNF865P0CJ78 1059 aaPredicted RBP18.66■□□□□ 0.58
CALD1-204ENST00000417172 TNFAIP2Q03169 654 aa18.66■□□□□ 0.58
CALD1-204ENST00000417172 STXBP4Q6ZWJ1 553 aa18.66■□□□□ 0.58
CALD1-204ENST00000417172 SYCP3Q8IZU3 236 aa18.66■□□□□ 0.58
CALD1-204ENST00000417172 MSL3Q8N5Y2 521 aaKnown RBP18.66■□□□□ 0.58
CALD1-204ENST00000417172 SOCS4Q8WXH5 440 aa18.66■□□□□ 0.58
CALD1-204ENST00000417172 SLC7A3Q8WY07 619 aa18.66■□□□□ 0.58
CALD1-204ENST00000417172 BBXQ8WY36 941 aaPredicted RBP18.66■□□□□ 0.58
CALD1-204ENST00000417172 EMID1Q96A84 441 aaPredicted RBP18.66■□□□□ 0.58
CALD1-204ENST00000417172 SMARCAD1Q9H4L7 1026 aa18.66■□□□□ 0.58
CALD1-204ENST00000417172 KMT5AQ9NQR1 393 aa18.66■□□□□ 0.58
CALD1-204ENST00000417172 AGPAT3Q9NRZ7 376 aa18.66■□□□□ 0.58
CALD1-204ENST00000417172 CETN3O15182 167 aa18.66■□□□□ 0.58
CALD1-204ENST00000417172 MAPTP10636 758 aaKnown RBP18.66■□□□□ 0.58
CALD1-204ENST00000417172 ADKP55263 362 aaKnown RBP18.66■□□□□ 0.58
CALD1-204ENST00000417172 GTF2BQ00403 316 aa18.66■□□□□ 0.58
CALD1-204ENST00000417172 IQSEC1Q6DN90 963 aa18.66■□□□□ 0.58
CALD1-204ENST00000417172 CCDC155Q8N6L0 562 aa18.66■□□□□ 0.58
CALD1-204ENST00000417172 CPLX3Q8WVH0 158 aa18.66■□□□□ 0.58
CALD1-204ENST00000417172 FAM167AQ96KS9 214 aa18.66■□□□□ 0.58
CALD1-204ENST00000417172 GBP3Q9H0R5 595 aa18.66■□□□□ 0.58
CALD1-204ENST00000417172 SIP14410 1827 aa18.66■□□□□ 0.58
CALD1-204ENST00000417172 DENND3A2RUS2 1198 aa18.65■□□□□ 0.58
CALD1-204ENST00000417172 ALDH1A1P00352 501 aa18.65■□□□□ 0.58
CALD1-204ENST00000417172 GLRA2P23416 452 aa18.65■□□□□ 0.58
CALD1-204ENST00000417172 CYP2J2P51589 502 aa18.65■□□□□ 0.58
CALD1-204ENST00000417172 LRRC71Q8N4P6 559 aa18.65■□□□□ 0.58
CALD1-204ENST00000417172 PPP1R13LQ8WUF5 828 aa18.65■□□□□ 0.58
CALD1-204ENST00000417172 RRAGDQ9NQL2 400 aaPredicted RBP18.65■□□□□ 0.58
CALD1-204ENST00000417172 USP20Q9Y2K6 914 aa18.65■□□□□ 0.58
CALD1-204ENST00000417172 RNF225M0QZC1 329 aaPredicted RBP18.64■□□□□ 0.58
CALD1-204ENST00000417172 DYNC1LI2O43237 492 aaPredicted RBP18.64■□□□□ 0.58
CALD1-204ENST00000417172 IGHA2P01877 340 aa18.64■□□□□ 0.58
CALD1-204ENST00000417172 MMP3P08254 477 aa18.64■□□□□ 0.58
CALD1-204ENST00000417172 FCGRTP55899 365 aa18.64■□□□□ 0.58
CALD1-204ENST00000417172 GSDMDP57764 484 aa18.64■□□□□ 0.58
CALD1-204ENST00000417172 CCZ1BP86790 482 aa18.64■□□□□ 0.58
CALD1-204ENST00000417172 CCZ1P86791 482 aaPredicted RBP18.64■□□□□ 0.58
CALD1-204ENST00000417172 RBL2Q08999 1139 aa18.64■□□□□ 0.58
CALD1-204ENST00000417172 TBC1D8BQ0IIM8 1120 aa18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms