RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 TMEM143Q96AN5 459 aa25.69■■□□□ 1.7
SMARCB1-205ENST00000417137 PPP1R16BQ96T49 567 aa25.69■■□□□ 1.7
SMARCB1-205ENST00000417137 BHMT2Q9H2M3 363 aa25.69■■□□□ 1.7
SMARCB1-205ENST00000417137 ADAMTS10Q9H324 1103 aa25.69■■□□□ 1.7
SMARCB1-205ENST00000417137 TANC1Q9C0D5 1861 aa25.68■■□□□ 1.7
SMARCB1-205ENST00000417137 GPR182O15218 404 aa25.68■■□□□ 1.7
SMARCB1-205ENST00000417137 USO1O60763 962 aaKnown RBP25.68■■□□□ 1.7
SMARCB1-205ENST00000417137 RPS6KA5O75582 802 aa25.68■■□□□ 1.7
SMARCB1-205ENST00000417137 TXLNAP40222 546 aa25.68■■□□□ 1.7
SMARCB1-205ENST00000417137 KCNJ6P48051 423 aa25.68■■□□□ 1.7
SMARCB1-205ENST00000417137 DNM1Q05193 864 aaKnown RBP25.68■■□□□ 1.7
SMARCB1-205ENST00000417137 PAK2Q13177 524 aa25.68■■□□□ 1.7
SMARCB1-205ENST00000417137 MXD4Q14582 209 aaPredicted RBP25.68■■□□□ 1.7
SMARCB1-205ENST00000417137 ZNF410Q86VK4 478 aa25.68■■□□□ 1.7
SMARCB1-205ENST00000417137 KCNG4Q8TDN1 519 aa25.68■■□□□ 1.7
SMARCB1-205ENST00000417137 PRPF31Q8WWY3 499 aaKnown RBP25.68■■□□□ 1.7
SMARCB1-205ENST00000417137 OSMRQ99650 979 aa25.68■■□□□ 1.7
SMARCB1-205ENST00000417137 GCOM2Q9BZD3 368 aaPredicted RBP25.68■■□□□ 1.7
SMARCB1-205ENST00000417137 INO80BQ9C086 356 aaPredicted RBP25.68■■□□□ 1.7
SMARCB1-205ENST00000417137 CCSER1Q9C0I3 900 aa25.68■■□□□ 1.7
SMARCB1-205ENST00000417137 CDHR5Q9HBB8 845 aa25.68■■□□□ 1.7
SMARCB1-205ENST00000417137 BMP2KQ9NSY1 1161 aaPredicted RBP25.68■■□□□ 1.7
SMARCB1-205ENST00000417137 COL4A3BPQ9Y5P4 624 aa25.68■■□□□ 1.7
SMARCB1-205ENST00000417137 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.67■■□□□ 1.7
SMARCB1-205ENST00000417137 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.67■■□□□ 1.7
SMARCB1-205ENST00000417137 CLIC6Q96NY7 704 aa25.67■■□□□ 1.7
SMARCB1-205ENST00000417137 OSBPL7Q9BZF2 842 aa25.67■■□□□ 1.7
SMARCB1-205ENST00000417137 CXXC1Q9P0U4 656 aaPredicted RBP25.67■■□□□ 1.7
SMARCB1-205ENST00000417137 CCDC39Q9UFE4 941 aa25.67■■□□□ 1.7
SMARCB1-205ENST00000417137 E9PMD0 336 aa25.66■■□□□ 1.7
SMARCB1-205ENST00000417137 CYP11B2P19099 503 aa25.66■■□□□ 1.7
SMARCB1-205ENST00000417137 EIF4BP23588 611 aaKnown RBP25.66■■□□□ 1.7
SMARCB1-205ENST00000417137 CD52P31358 61 aa25.66■■□□□ 1.7
SMARCB1-205ENST00000417137 KRT85P78386 507 aa25.66■■□□□ 1.7
SMARCB1-205ENST00000417137 GRB10Q13322 594 aa25.66■■□□□ 1.7
SMARCB1-205ENST00000417137 PHOSPHO2Q8TCD6 241 aa25.66■■□□□ 1.7
SMARCB1-205ENST00000417137 PNMA5Q96PV4 448 aa25.66■■□□□ 1.7
SMARCB1-205ENST00000417137 PLIN2Q99541 437 aa25.66■■□□□ 1.7
SMARCB1-205ENST00000417137 FTHL17Q9BXU8 183 aa25.66■■□□□ 1.7
SMARCB1-205ENST00000417137 AGO3Q9H9G7 860 aaKnown RBP25.66■■□□□ 1.7
SMARCB1-205ENST00000417137 XPNPEP1Q9NQW7 623 aa25.66■■□□□ 1.7
SMARCB1-205ENST00000417137 PADI3Q9ULW8 664 aa25.66■■□□□ 1.7
SMARCB1-205ENST00000417137 LAMTOR4Q0VGL1 99 aa25.65■■□□□ 1.7
SMARCB1-205ENST00000417137 NFX1Q12986 1120 aaKnown RBP25.65■■□□□ 1.7
SMARCB1-205ENST00000417137 TFDP1Q14186 410 aa25.65■■□□□ 1.7
SMARCB1-205ENST00000417137 TMEM119Q4V9L6 283 aa25.65■■□□□ 1.7
SMARCB1-205ENST00000417137 NLRP4Q96MN2 994 aa25.65■■□□□ 1.7
SMARCB1-205ENST00000417137 SLC9A7Q96T83 725 aa25.65■■□□□ 1.7
SMARCB1-205ENST00000417137 NOC2LQ9Y3T9 749 aaKnown RBP25.65■■□□□ 1.7
SMARCB1-205ENST00000417137 SCN5AQ14524 2016 aa25.64■■□□□ 1.7
SMARCB1-205ENST00000417137 A0A087WZ62 844 aa25.64■■□□□ 1.7
SMARCB1-205ENST00000417137 CUTAO60888 179 aa25.64■■□□□ 1.7
SMARCB1-205ENST00000417137 SRGAP2CP0DJJ0 459 aa25.64■■□□□ 1.7
SMARCB1-205ENST00000417137 DARSP14868 501 aaKnown RBP25.64■■□□□ 1.7
SMARCB1-205ENST00000417137 ATP2A2P16615 1042 aaKnown RBP25.64■■□□□ 1.7
SMARCB1-205ENST00000417137 NCLP19338 710 aaKnown RBP25.64■■□□□ 1.7
SMARCB1-205ENST00000417137 ARL2P36404 184 aa25.64■■□□□ 1.7
SMARCB1-205ENST00000417137 SPECC1Q5M775 1068 aa25.64■■□□□ 1.7
SMARCB1-205ENST00000417137 TMEM40Q8WWA1 233 aa25.64■■□□□ 1.7
SMARCB1-205ENST00000417137 SYMPKQ92797 1274 aaKnown RBP25.64■■□□□ 1.7
SMARCB1-205ENST00000417137 EPSTI1Q96J88 318 aa25.64■■□□□ 1.7
SMARCB1-205ENST00000417137 ZNF668Q96K58 619 aaPredicted RBP25.64■■□□□ 1.7
SMARCB1-205ENST00000417137 FDXACB1Q9BRP7 624 aaPredicted RBP25.64■■□□□ 1.7
SMARCB1-205ENST00000417137 RCOR1Q9UKL0 485 aa25.64■■□□□ 1.7
SMARCB1-205ENST00000417137 ST3GAL5Q9UNP4 418 aa25.64■■□□□ 1.7
SMARCB1-205ENST00000417137 EVPLQ92817 2033 aa25.63■■□□□ 1.69
SMARCB1-205ENST00000417137 AMHP03971 560 aa25.63■■□□□ 1.69
SMARCB1-205ENST00000417137 DDIT3P35638 169 aa25.63■■□□□ 1.69
SMARCB1-205ENST00000417137 WDR5P61964 334 aaKnown RBP25.63■■□□□ 1.69
SMARCB1-205ENST00000417137 KARSQ15046 597 aaKnown RBP25.63■■□□□ 1.69
SMARCB1-205ENST00000417137 TCTN1Q2MV58 587 aa25.63■■□□□ 1.69
SMARCB1-205ENST00000417137 FAM102BQ5T8I3 360 aa25.63■■□□□ 1.69
SMARCB1-205ENST00000417137 MAEAQ7L5Y9 396 aa25.63■■□□□ 1.69
SMARCB1-205ENST00000417137 KCNK18Q7Z418 384 aa25.63■■□□□ 1.69
SMARCB1-205ENST00000417137 KSR1Q8IVT5 923 aa25.63■■□□□ 1.69
SMARCB1-205ENST00000417137 POLR3FQ9H1D9 316 aaPredicted RBP25.63■■□□□ 1.69
SMARCB1-205ENST00000417137 SSBP05455 408 aaKnown RBP eCLIP25.62■■□□□ 1.69
SMARCB1-205ENST00000417137 ME1P48163 572 aa25.62■■□□□ 1.69
SMARCB1-205ENST00000417137 SMAD3P84022 425 aaKnown RBP25.62■■□□□ 1.69
SMARCB1-205ENST00000417137 POU5F1BQ06416 359 aa25.62■■□□□ 1.69
SMARCB1-205ENST00000417137 SRGAP1Q7Z6B7 1085 aa25.62■■□□□ 1.69
SMARCB1-205ENST00000417137 SYT2Q8N9I0 419 aaPredicted RBP25.62■■□□□ 1.69
SMARCB1-205ENST00000417137 RNF149Q8NC42 400 aa25.62■■□□□ 1.69
SMARCB1-205ENST00000417137 TIPINQ9BVW5 301 aa25.62■■□□□ 1.69
SMARCB1-205ENST00000417137 ERVK-5Q9HDB9 667 aa25.62■■□□□ 1.69
SMARCB1-205ENST00000417137 KCND2Q9NZV8 630 aa25.62■■□□□ 1.69
SMARCB1-205ENST00000417137 PLA2G4BP0C869 781 aa25.61■■□□□ 1.69
SMARCB1-205ENST00000417137 PLCG1P19174 1290 aa25.61■■□□□ 1.69
SMARCB1-205ENST00000417137 SFPQP23246 707 aaKnown RBP eCLIP25.61■■□□□ 1.69
SMARCB1-205ENST00000417137 PHKA2P46019 1235 aa25.61■■□□□ 1.69
SMARCB1-205ENST00000417137 RRAGBQ5VZM2 374 aa25.61■■□□□ 1.69
SMARCB1-205ENST00000417137 USP49Q70CQ1 688 aa25.61■■□□□ 1.69
SMARCB1-205ENST00000417137 FAM228AQ86W67 206 aa25.61■■□□□ 1.69
SMARCB1-205ENST00000417137 KIFAP3Q92845 792 aa25.61■■□□□ 1.69
SMARCB1-205ENST00000417137 SPATA32Q96LK8 384 aa25.61■■□□□ 1.69
SMARCB1-205ENST00000417137 SCAND2PQ9GZW5 306 aaPredicted RBP25.61■■□□□ 1.69
SMARCB1-205ENST00000417137 CIZ1Q9ULV3 898 aaPredicted RBP25.61■■□□□ 1.69
SMARCB1-205ENST00000417137 ENPP3O14638 875 aa25.6■■□□□ 1.69
SMARCB1-205ENST00000417137 RINT1Q6NUQ1 792 aa25.6■■□□□ 1.69
SMARCB1-205ENST00000417137 CCDC73Q6ZRK6 1079 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms