RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 TMTC1Q8IUR5 882 aa11.71□□□□□ -0.54
SMPD4P1-201ENST00000416717 FAM186BQ8IYM0 893 aa11.71□□□□□ -0.54
SMPD4P1-201ENST00000416717 DNAJC7Q99615 494 aa11.71□□□□□ -0.54
SMPD4P1-201ENST00000416717 STRA6Q9BX79 667 aa11.71□□□□□ -0.54
SMPD4P1-201ENST00000416717 LZTFL1Q9NQ48 299 aa11.71□□□□□ -0.54
SMPD4P1-201ENST00000416717 DDX41Q9UJV9 622 aaKnown RBP11.71□□□□□ -0.54
SMPD4P1-201ENST00000416717 UBE4BO95155 1302 aa11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 UNCXA6NJT0 531 aa11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 CCP110O43303 1012 aa11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 CCDC175P0C221 793 aa11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 NPTX2P47972 431 aa11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 POLGP54098 1239 aaPredicted RBP11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 CCNA1P78396 465 aa11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 ZBED6P86452 979 aa11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 DMP1Q13316 513 aaPredicted RBP11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 GJC2Q5T442 439 aaPredicted RBP11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 RRAGAQ7L523 313 aa11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 CACNA2D4Q7Z3S7 1137 aa11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 ANKRD23Q86SG2 305 aa11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 RETREG2Q8NC44 543 aa11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 ZNF397Q8NF99 534 aaPredicted RBP11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 TMEM143Q96AN5 459 aa11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 PCYT2Q99447 389 aa11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 XPNPEP1Q9NQW7 623 aa11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 MAFBQ9Y5Q3 323 aaPredicted RBP11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 ADGRG1Q9Y653 693 aa11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 NOP56O00567 594 aaKnown RBP11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 EXOC3O60645 756 aa11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 ATG7O95352 703 aa11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 ITGBL1O95965 494 aaPredicted RBP11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 OATP04181 439 aa11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 TGFB3P10600 412 aa11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 ACTN1P12814 892 aa11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 PSMC2P35998 433 aaKnown RBP11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 ARMCX2Q7L311 632 aa11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 ZSWIM2Q8NEG5 633 aa11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 SHCBP1Q8NEM2 672 aa11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 GLG1Q92896 1179 aa11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 ACCSQ96QU6 501 aa11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 CBWD1Q9BRT8 395 aa11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 POLR3FQ9H1D9 316 aaPredicted RBP11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 ATP6V0A4Q9HBG4 840 aa11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 KMT5AQ9NQR1 393 aa11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 ZNHIT6Q9NWK9 470 aaKnown RBP11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 FAM184BQ9ULE4 1060 aa11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 FRMD4BQ9Y2L6 1034 aa11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 IVNS1ABPQ9Y6Y0 642 aa11.7□□□□□ -0.54
SMPD4P1-201ENST00000416717 EVPLQ92817 2033 aa11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 DENND3A2RUS2 1198 aa11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 LRRC53A6NM62 1247 aa11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 DGAT1O75907 488 aa11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 AFPP02771 609 aaKnown RBP11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 PLEKP08567 350 aaPredicted RBP11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 TRIM49P0CI25 452 aa11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 TRIM49CP0CI26 452 aa11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 TXNP10599 105 aaKnown RBP11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 SLC9A1P19634 815 aa11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 KCNA4P22459 653 aa11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 FECHP22830 423 aa11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 STAT5BP51692 787 aa11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 ZNF157P51786 506 aaPredicted RBP11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 SMTNP53814 917 aa11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 POLR2FP61218 127 aaKnown RBP11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 EMC2Q15006 297 aa11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 METTL7BQ6UX53 244 aa11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 DHX37Q8IY37 1157 aaKnown RBP11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 SEPT1Q8WYJ6 367 aa11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 TIPINQ9BVW5 301 aa11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 IRX2Q9BZI1 471 aaPredicted RBP11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 DNAI1Q9UI46 699 aa11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 USP20Q9Y2K6 914 aa11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 ADGRA3Q8IWK6 1321 aa11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 GOLGA8IPA6NC78 632 aa11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 GOLGA8JA6NMD2 632 aa11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 RIOK3O14730 519 aaKnown RBP11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 SLC16A3O15427 465 aaKnown RBP11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 ZBTB48P10074 688 aaPredicted RBP11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 NCKAP1LP55160 1127 aa11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 ENOX2Q16206 610 aaKnown RBP11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 TMEM161BQ8NDZ6 487 aa11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 GTF3C2Q8WUA4 911 aaPredicted RBP11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 KIFAP3Q92845 792 aa11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 SLC35C1Q96A29 364 aa11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 SPATA33Q96N06 139 aa11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 TMEM206Q9H813 350 aa11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 METTL14Q9HCE5 456 aaKnown RBP11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 CPA4Q9UI42 421 aa11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 TFR2Q9UP52 801 aa11.69□□□□□ -0.54
SMPD4P1-201ENST00000416717 UQCRHLA0A096LP55 91 aa11.68□□□□□ -0.54
SMPD4P1-201ENST00000416717 A0A1W2PQJ5 194 aa11.68□□□□□ -0.54
SMPD4P1-201ENST00000416717 ANKRD63C9JTQ0 380 aa11.68□□□□□ -0.54
SMPD4P1-201ENST00000416717 NOL4O94818 638 aa11.68□□□□□ -0.54
SMPD4P1-201ENST00000416717 ABL1P00519 1130 aa11.68□□□□□ -0.54
SMPD4P1-201ENST00000416717 UQCRHP07919 91 aa11.68□□□□□ -0.54
SMPD4P1-201ENST00000416717 MAPTP10636 758 aaKnown RBP11.68□□□□□ -0.54
SMPD4P1-201ENST00000416717 GCLCP48506 637 aaPredicted RBP11.68□□□□□ -0.54
SMPD4P1-201ENST00000416717 GTF2BQ00403 316 aa11.68□□□□□ -0.54
SMPD4P1-201ENST00000416717 FIGNQ5HY92 759 aa11.68□□□□□ -0.54
SMPD4P1-201ENST00000416717 CELF3Q5SZQ8 465 aaKnown RBP11.68□□□□□ -0.54
SMPD4P1-201ENST00000416717 FAM160B1Q5W0V3 765 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms