RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 INSL6Q9Y581 213 aa4.77□□□□□ -1.65
TRAPPC13-203ENST00000415825 MAN2B1O00754 1011 aa4.76□□□□□ -1.65
TRAPPC13-203ENST00000415825 CTGFP29279 349 aa4.76□□□□□ -1.65
TRAPPC13-203ENST00000415825 STAT3P40763 770 aa4.76□□□□□ -1.65
TRAPPC13-203ENST00000415825 DDR2Q16832 855 aa4.76□□□□□ -1.65
TRAPPC13-203ENST00000415825 GAGE13Q4V321 117 aa4.76□□□□□ -1.65
TRAPPC13-203ENST00000415825 PLEKHG4Q58EX7 1191 aa4.76□□□□□ -1.65
TRAPPC13-203ENST00000415825 PTPRN2Q92932 1015 aa4.76□□□□□ -1.65
TRAPPC13-203ENST00000415825 ZNF669Q96BR6 464 aaPredicted RBP4.76□□□□□ -1.65
TRAPPC13-203ENST00000415825 AMNQ9BXJ7 453 aa4.76□□□□□ -1.65
TRAPPC13-203ENST00000415825 ZNF408Q9H9D4 720 aa4.76□□□□□ -1.65
TRAPPC13-203ENST00000415825 IL23AQ9NPF7 189 aa4.76□□□□□ -1.65
TRAPPC13-203ENST00000415825 ARHGEF4Q9NR80 690 aa4.76□□□□□ -1.65
TRAPPC13-203ENST00000415825 ST7Q9NRC1 585 aa4.76□□□□□ -1.65
TRAPPC13-203ENST00000415825 NCDNQ9UBB6 729 aa4.76□□□□□ -1.65
TRAPPC13-203ENST00000415825 SFMBT1Q9UHJ3 866 aa4.76□□□□□ -1.65
TRAPPC13-203ENST00000415825 DENND2AQ9ULE3 1009 aa4.76□□□□□ -1.65
TRAPPC13-203ENST00000415825 SORCS3Q9UPU3 1222 aa4.76□□□□□ -1.65
TRAPPC13-203ENST00000415825 COX11Q9Y6N1 276 aa4.76□□□□□ -1.65
TRAPPC13-203ENST00000415825 TCRBV5S4A2TA0A5A2 114 aa4.75□□□□□ -1.65
TRAPPC13-203ENST00000415825 PRAMEF22A3QJZ6 481 aa4.75□□□□□ -1.65
TRAPPC13-203ENST00000415825 BLACEA4D250 179 aa4.75□□□□□ -1.65
TRAPPC13-203ENST00000415825 PROB1E7EW31 1015 aa4.75□□□□□ -1.65
TRAPPC13-203ENST00000415825 INO80B-WBP1J3KQ70 363 aa4.75□□□□□ -1.65
TRAPPC13-203ENST00000415825 DAPK3O43293 454 aa4.75□□□□□ -1.65
TRAPPC13-203ENST00000415825 SCAF4O95104 1147 aaKnown RBP4.75□□□□□ -1.65
TRAPPC13-203ENST00000415825 C4BPAP04003 597 aaKnown RBP4.75□□□□□ -1.65
TRAPPC13-203ENST00000415825 MMEP08473 750 aa4.75□□□□□ -1.65
TRAPPC13-203ENST00000415825 GUCY1A3Q02108 690 aa4.75□□□□□ -1.65
TRAPPC13-203ENST00000415825 ARID5AQ03989 594 aa4.75□□□□□ -1.65
TRAPPC13-203ENST00000415825 TCIRG1Q13488 830 aa4.75□□□□□ -1.65
TRAPPC13-203ENST00000415825 SAFB2Q14151 953 aaKnown RBP eCLIP4.75□□□□□ -1.65
TRAPPC13-203ENST00000415825 MICALCLQ6ZW33 695 aa4.75□□□□□ -1.65
TRAPPC13-203ENST00000415825 ELOA2Q8IYF1 753 aaPredicted RBP4.75□□□□□ -1.65
TRAPPC13-203ENST00000415825 CAVIN3Q969G5 261 aa4.75□□□□□ -1.65
TRAPPC13-203ENST00000415825 E2F7Q96AV8 911 aa4.75□□□□□ -1.65
TRAPPC13-203ENST00000415825 GBP4Q96PP9 640 aa4.75□□□□□ -1.65
TRAPPC13-203ENST00000415825 INO80BQ9C086 356 aaPredicted RBP4.75□□□□□ -1.65
TRAPPC13-203ENST00000415825 EPC1Q9H2F5 836 aa4.75□□□□□ -1.65
TRAPPC13-203ENST00000415825 TRPS1Q9UHF7 1281 aa4.75□□□□□ -1.65
TRAPPC13-203ENST00000415825 ASB1Q9Y576 335 aa4.75□□□□□ -1.65
TRAPPC13-203ENST00000415825 FOXP2O15409 715 aa4.74□□□□□ -1.65
TRAPPC13-203ENST00000415825 HIP1RO75146 1068 aa4.74□□□□□ -1.65
TRAPPC13-203ENST00000415825 C1RP00736 705 aa4.74□□□□□ -1.65
TRAPPC13-203ENST00000415825 SRGAP2CP0DJJ0 459 aa4.74□□□□□ -1.65
TRAPPC13-203ENST00000415825 PYGMP11217 842 aa4.74□□□□□ -1.65
TRAPPC13-203ENST00000415825 DNM2P50570 870 aa4.74□□□□□ -1.65
TRAPPC13-203ENST00000415825 NPEPPSP55786 919 aa4.74□□□□□ -1.65
TRAPPC13-203ENST00000415825 NBPF6Q5VWK0 638 aa4.74□□□□□ -1.65
TRAPPC13-203ENST00000415825 RHOUQ7L0Q8 258 aa4.74□□□□□ -1.65
TRAPPC13-203ENST00000415825 NBPF4Q96M43 638 aa4.74□□□□□ -1.65
TRAPPC13-203ENST00000415825 CDC6Q99741 560 aa4.74□□□□□ -1.65
TRAPPC13-203ENST00000415825 SPATA5L1Q9BVQ7 753 aa4.74□□□□□ -1.65
TRAPPC13-203ENST00000415825 EIF2B4Q9UI10 523 aaKnown RBP4.74□□□□□ -1.65
TRAPPC13-203ENST00000415825 SCDO00767 359 aa4.73□□□□□ -1.65
TRAPPC13-203ENST00000415825 IKBKBO14920 756 aa4.73□□□□□ -1.65
TRAPPC13-203ENST00000415825 MAFO75444 373 aaPredicted RBP4.73□□□□□ -1.65
TRAPPC13-203ENST00000415825 ERCC5P28715 1186 aaPredicted RBP4.73□□□□□ -1.65
TRAPPC13-203ENST00000415825 ELLP55199 621 aaPredicted RBP4.73□□□□□ -1.65
TRAPPC13-203ENST00000415825 JAM2P57087 298 aa4.73□□□□□ -1.65
TRAPPC13-203ENST00000415825 PCDH19Q8TAB3 1148 aa4.73□□□□□ -1.65
TRAPPC13-203ENST00000415825 ST8SIA2Q92186 375 aa4.73□□□□□ -1.65
TRAPPC13-203ENST00000415825 ERCC4Q92889 916 aaPredicted RBP4.73□□□□□ -1.65
TRAPPC13-203ENST00000415825 KCNH7Q9NS40 1196 aa4.73□□□□□ -1.65
TRAPPC13-203ENST00000415825 TRAF6Q9Y4K3 522 aa4.73□□□□□ -1.65
TRAPPC13-203ENST00000415825 CCDC66A2RUB6 948 aa4.72□□□□□ -1.65
TRAPPC13-203ENST00000415825 KLRG2A4D1S0 409 aaPredicted RBP4.72□□□□□ -1.65
TRAPPC13-203ENST00000415825 GRID2IPA4D2P6 1211 aa4.72□□□□□ -1.65
TRAPPC13-203ENST00000415825 TRIM24O15164 1050 aa4.72□□□□□ -1.65
TRAPPC13-203ENST00000415825 MPIG6BO95866 241 aa4.72□□□□□ -1.65
TRAPPC13-203ENST00000415825 AMY2AP04746 511 aa4.72□□□□□ -1.65
TRAPPC13-203ENST00000415825 JUNP05412 331 aaKnown RBP4.72□□□□□ -1.65
TRAPPC13-203ENST00000415825 AMY2BP19961 511 aa4.72□□□□□ -1.65
TRAPPC13-203ENST00000415825 SUMO1P63165 101 aaKnown RBP4.72□□□□□ -1.65
TRAPPC13-203ENST00000415825 DGKDQ16760 1214 aa4.72□□□□□ -1.65
TRAPPC13-203ENST00000415825 DCAF17Q5H9S7 520 aaPredicted RBP4.72□□□□□ -1.65
TRAPPC13-203ENST00000415825 COLEC12Q5KU26 742 aa4.72□□□□□ -1.65
TRAPPC13-203ENST00000415825 PAPD7Q5XG87 772 aaKnown RBP4.72□□□□□ -1.65
TRAPPC13-203ENST00000415825 FBXO42Q6P3S6 717 aa4.72□□□□□ -1.65
TRAPPC13-203ENST00000415825 ANKS3Q6ZW76 656 aa4.72□□□□□ -1.65
TRAPPC13-203ENST00000415825 BEND2Q8NDZ0 799 aa4.72□□□□□ -1.65
TRAPPC13-203ENST00000415825 MDGA1Q8NFP4 955 aa4.72□□□□□ -1.65
TRAPPC13-203ENST00000415825 ASB15Q8WXK1 588 aa4.72□□□□□ -1.65
TRAPPC13-203ENST00000415825 SYNPO2Q9UMS6 1093 aa4.72□□□□□ -1.65
TRAPPC13-203ENST00000415825 PCDHA8Q9Y5H6 950 aa4.72□□□□□ -1.65
TRAPPC13-203ENST00000415825 ZNF561-AS1K7EIQ3 104 aa4.71□□□□□ -1.66
TRAPPC13-203ENST00000415825 ARVCFO00192 962 aa4.71□□□□□ -1.66
TRAPPC13-203ENST00000415825 KCNK3O14649 394 aa4.71□□□□□ -1.66
TRAPPC13-203ENST00000415825 MAFGO15525 162 aa4.71□□□□□ -1.66
TRAPPC13-203ENST00000415825 VSIG10L2P0DP72 767 aa4.71□□□□□ -1.66
TRAPPC13-203ENST00000415825 RABGGTBP53611 331 aa4.71□□□□□ -1.66
TRAPPC13-203ENST00000415825 GABREP78334 506 aa4.71□□□□□ -1.66
TRAPPC13-203ENST00000415825 LACTBP83111 547 aaPredicted RBP4.71□□□□□ -1.66
TRAPPC13-203ENST00000415825 IQSEC1Q6DN90 963 aa4.71□□□□□ -1.66
TRAPPC13-203ENST00000415825 NTN5Q8WTR8 489 aaPredicted RBP4.71□□□□□ -1.66
TRAPPC13-203ENST00000415825 SMG7Q92540 1137 aaKnown RBP4.71□□□□□ -1.66
TRAPPC13-203ENST00000415825 ZNF512Q96ME7 567 aaPredicted RBP4.71□□□□□ -1.66
TRAPPC13-203ENST00000415825 GPHA2Q96T91 129 aa4.71□□□□□ -1.66
TRAPPC13-203ENST00000415825 ASXL2Q76L83 1435 aa4.71□□□□□ -1.66
TRAPPC13-203ENST00000415825 FGRP09769 529 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms