RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 CCDC142Q17RM4 750 aa3.75□□□□□ -1.81
LINC00428-201ENST00000415620 PAN2Q504Q3 1202 aaKnown RBP3.75□□□□□ -1.81
LINC00428-201ENST00000415620 CD276Q5ZPR3 534 aa3.75□□□□□ -1.81
LINC00428-201ENST00000415620 ZNF627Q7L945 461 aa3.75□□□□□ -1.81
LINC00428-201ENST00000415620 ULK2Q8IYT8 1036 aa3.75□□□□□ -1.81
LINC00428-201ENST00000415620 STPG3Q8N7X2 389 aa3.75□□□□□ -1.81
LINC00428-201ENST00000415620 UHMK1Q8TAS1 419 aaKnown RBP3.75□□□□□ -1.81
LINC00428-201ENST00000415620 OR14A2Q96R54 314 aa3.75□□□□□ -1.81
LINC00428-201ENST00000415620 ZNF703Q9H7S9 590 aaPredicted RBP3.75□□□□□ -1.81
LINC00428-201ENST00000415620 ARHGAP20Q9P2F6 1191 aa3.75□□□□□ -1.81
LINC00428-201ENST00000415620 REXO2Q9Y3B8 237 aaKnown RBP3.75□□□□□ -1.81
LINC00428-201ENST00000415620 CCDC9Q9Y3X0 531 aaKnown RBP3.75□□□□□ -1.81
LINC00428-201ENST00000415620 XRN1Q8IZH2 1706 aaKnown RBP3.75□□□□□ -1.81
LINC00428-201ENST00000415620 TOPAZ1Q8N9V7 1692 aa3.75□□□□□ -1.81
LINC00428-201ENST00000415620 ZNF839A8K0R7 811 aa3.74□□□□□ -1.81
LINC00428-201ENST00000415620 MATN2O00339 956 aa3.74□□□□□ -1.81
LINC00428-201ENST00000415620 SUSD5O60279 629 aa3.74□□□□□ -1.81
LINC00428-201ENST00000415620 MSCO60682 206 aa3.74□□□□□ -1.81
LINC00428-201ENST00000415620 TOMM70O94826 608 aa3.74□□□□□ -1.81
LINC00428-201ENST00000415620 ENO2P09104 434 aaPredicted RBP3.74□□□□□ -1.81
LINC00428-201ENST00000415620 BMP5P22003 454 aa3.74□□□□□ -1.81
LINC00428-201ENST00000415620 RPS19P39019 145 aaKnown RBP3.74□□□□□ -1.81
LINC00428-201ENST00000415620 IL12RB1P42701 662 aa3.74□□□□□ -1.81
LINC00428-201ENST00000415620 PFKPQ01813 784 aa3.74□□□□□ -1.81
LINC00428-201ENST00000415620 GRIN1Q05586 938 aa3.74□□□□□ -1.81
LINC00428-201ENST00000415620 TOP3AQ13472 1001 aaPredicted RBP3.74□□□□□ -1.81
LINC00428-201ENST00000415620 VPS72Q15906 364 aa3.74□□□□□ -1.81
LINC00428-201ENST00000415620 RNF151Q2KHN1 245 aa3.74□□□□□ -1.81
LINC00428-201ENST00000415620 ZMAT1Q5H9K5 638 aa3.74□□□□□ -1.81
LINC00428-201ENST00000415620 C6orf15Q6UXA7 325 aaPredicted RBP3.74□□□□□ -1.81
LINC00428-201ENST00000415620 OTOP3Q7RTS5 596 aa3.74□□□□□ -1.81
LINC00428-201ENST00000415620 ZNF808Q8N4W9 903 aaPredicted RBP3.74□□□□□ -1.81
LINC00428-201ENST00000415620 CPLX3Q8WVH0 158 aa3.74□□□□□ -1.81
LINC00428-201ENST00000415620 CLIP3Q96DZ5 547 aa3.74□□□□□ -1.81
LINC00428-201ENST00000415620 MSL2Q9HCI7 577 aa3.74□□□□□ -1.81
LINC00428-201ENST00000415620 GPR27Q9NS67 375 aa3.74□□□□□ -1.81
LINC00428-201ENST00000415620 PPARGC1AQ9UBK2 798 aaKnown RBP3.74□□□□□ -1.81
LINC00428-201ENST00000415620 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.74□□□□□ -1.81
LINC00428-201ENST00000415620 TELO2Q9Y4R8 837 aa3.74□□□□□ -1.81
LINC00428-201ENST00000415620 TULP4Q9NRJ4 1543 aa3.74□□□□□ -1.81
LINC00428-201ENST00000415620 DHX57Q6P158 1386 aaKnown RBP3.74□□□□□ -1.81
LINC00428-201ENST00000415620 NOS1P29475 1434 aa3.73□□□□□ -1.81
LINC00428-201ENST00000415620 TROQ12816 1431 aaPredicted RBP3.73□□□□□ -1.81
LINC00428-201ENST00000415620 ADGRL3Q9HAR2 1447 aa3.73□□□□□ -1.81
LINC00428-201ENST00000415620 TMEM191CA6NGB0 347 aa3.73□□□□□ -1.81
LINC00428-201ENST00000415620 KIF3BO15066 747 aa3.73□□□□□ -1.81
LINC00428-201ENST00000415620 FOXN1O15353 648 aa3.73□□□□□ -1.81
LINC00428-201ENST00000415620 CUTAO60888 179 aa3.73□□□□□ -1.81
LINC00428-201ENST00000415620 POLD1P28340 1107 aa3.73□□□□□ -1.81
LINC00428-201ENST00000415620 KCNJ6P48051 423 aa3.73□□□□□ -1.81
LINC00428-201ENST00000415620 EPHA5P54756 1037 aa3.73□□□□□ -1.81
LINC00428-201ENST00000415620 ZC3H6P61129 1189 aaKnown RBP3.73□□□□□ -1.81
LINC00428-201ENST00000415620 MAP4K2Q12851 820 aa3.73□□□□□ -1.81
LINC00428-201ENST00000415620 TUSC3Q13454 348 aa3.73□□□□□ -1.81
LINC00428-201ENST00000415620 NFYCQ13952 458 aa3.73□□□□□ -1.81
LINC00428-201ENST00000415620 SV2CQ496J9 727 aa3.73□□□□□ -1.81
LINC00428-201ENST00000415620 MRM1Q6IN84 353 aaKnown RBP3.73□□□□□ -1.81
LINC00428-201ENST00000415620 FAM178BQ8IXR5 827 aa3.73□□□□□ -1.81
LINC00428-201ENST00000415620 TTPALQ9BTX7 342 aa3.73□□□□□ -1.81
LINC00428-201ENST00000415620 JAM3Q9BX67 310 aa3.73□□□□□ -1.81
LINC00428-201ENST00000415620 C12orf65Q9H3J6 166 aaKnown RBP3.73□□□□□ -1.81
LINC00428-201ENST00000415620 PARPBPQ9NWS1 579 aa3.73□□□□□ -1.81
LINC00428-201ENST00000415620 A0A0C4DFX4 3053 aa3.73□□□□□ -1.81
LINC00428-201ENST00000415620 PXDNQ92626 1479 aa3.73□□□□□ -1.81
LINC00428-201ENST00000415620 GCC2Q8IWJ2 1684 aa3.72□□□□□ -1.81
LINC00428-201ENST00000415620 ADAMTS7Q9UKP4 1686 aa3.72□□□□□ -1.81
LINC00428-201ENST00000415620 LMTK2Q8IWU2 1503 aa3.72□□□□□ -1.81
LINC00428-201ENST00000415620 B2RBV5 119 aa3.72□□□□□ -1.81
LINC00428-201ENST00000415620 PEX11BO96011 259 aa3.72□□□□□ -1.81
LINC00428-201ENST00000415620 LTFP02788 710 aa3.72□□□□□ -1.81
LINC00428-201ENST00000415620 FBLP22087 321 aaKnown RBP3.72□□□□□ -1.81
LINC00428-201ENST00000415620 HHEXQ03014 270 aa3.72□□□□□ -1.81
LINC00428-201ENST00000415620 RSPO2Q6UXX9 243 aaPredicted RBP3.72□□□□□ -1.81
LINC00428-201ENST00000415620 RBM12BQ8IXT5 1001 aaKnown RBP3.72□□□□□ -1.81
LINC00428-201ENST00000415620 CFHR4Q92496 578 aa3.72□□□□□ -1.81
LINC00428-201ENST00000415620 DPYSL5Q9BPU6 564 aa3.72□□□□□ -1.81
LINC00428-201ENST00000415620 PLA2G12BQ9BX93 195 aa3.72□□□□□ -1.81
LINC00428-201ENST00000415620 TLR9Q9NR96 1032 aa3.72□□□□□ -1.81
LINC00428-201ENST00000415620 NR2E1Q9Y466 385 aa3.72□□□□□ -1.81
LINC00428-201ENST00000415620 DHX29Q7Z478 1369 aaKnown RBP3.72□□□□□ -1.81
LINC00428-201ENST00000415620 C1orf167Q5SNV9 1468 aa3.72□□□□□ -1.81
LINC00428-201ENST00000415620 VIRMAQ69YN4 1812 aaKnown RBP3.72□□□□□ -1.81
LINC00428-201ENST00000415620 COL6A3P12111 3177 aa3.71□□□□□ -1.81
LINC00428-201ENST00000415620 PTPRUQ92729 1446 aa3.71□□□□□ -1.82
LINC00428-201ENST00000415620 EHBP1L1Q8N3D4 1523 aa3.71□□□□□ -1.82
LINC00428-201ENST00000415620 CICQ96RK0 1608 aaPredicted RBP3.71□□□□□ -1.82
LINC00428-201ENST00000415620 ACOT7O00154 380 aa3.71□□□□□ -1.82
LINC00428-201ENST00000415620 GRIA2P42262 883 aa3.71□□□□□ -1.82
LINC00428-201ENST00000415620 MRPS21P82921 87 aaKnown RBP3.71□□□□□ -1.82
LINC00428-201ENST00000415620 FOXL1Q12952 345 aa3.71□□□□□ -1.82
LINC00428-201ENST00000415620 Q6ZPA2 131 aa3.71□□□□□ -1.82
LINC00428-201ENST00000415620 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.71□□□□□ -1.82
LINC00428-201ENST00000415620 SGMS1Q86VZ5 419 aa3.71□□□□□ -1.82
LINC00428-201ENST00000415620 ANAPC16Q96DE5 110 aa3.71□□□□□ -1.82
LINC00428-201ENST00000415620 SCYL1Q96KG9 808 aa3.71□□□□□ -1.82
LINC00428-201ENST00000415620 TACO1Q9BSH4 297 aaKnown RBP3.71□□□□□ -1.82
LINC00428-201ENST00000415620 MTFR1LQ9H019 292 aa3.71□□□□□ -1.82
LINC00428-201ENST00000415620 SLC2A4RGQ9NR83 387 aa3.71□□□□□ -1.82
LINC00428-201ENST00000415620 LRP2BPQ9P2M1 347 aa3.71□□□□□ -1.82
LINC00428-201ENST00000415620 PUF60Q9UHX1 559 aaKnown RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms