RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 C8orf37Q96NL8 207 aa19.55■□□□□ 0.72
SCARB1-203ENST00000415380 CRAMP1Q96RY5 1269 aa19.55■□□□□ 0.72
SCARB1-203ENST00000415380 POLR3CQ9BUI4 534 aaPredicted RBP19.55■□□□□ 0.72
SCARB1-203ENST00000415380 STK33Q9BYT3 514 aa19.55■□□□□ 0.72
SCARB1-203ENST00000415380 DNAJC12Q9UKB3 198 aa19.55■□□□□ 0.72
SCARB1-203ENST00000415380 FAM170AA1A519 330 aa19.55■□□□□ 0.72
SCARB1-203ENST00000415380 ZC2HC1CQ53FD0 456 aaPredicted RBP19.55■□□□□ 0.72
SCARB1-203ENST00000415380 CCDC13Q8IYE1 715 aa19.55■□□□□ 0.72
SCARB1-203ENST00000415380 PIGOQ8TEQ8 1089 aa19.55■□□□□ 0.72
SCARB1-203ENST00000415380 RAPGEF5Q92565 580 aa19.55■□□□□ 0.72
SCARB1-203ENST00000415380 YY1AP1Q9H869 796 aa19.55■□□□□ 0.72
SCARB1-203ENST00000415380 NYAP2Q9P242 653 aa19.55■□□□□ 0.72
SCARB1-203ENST00000415380 PAEPP09466 180 aa19.54■□□□□ 0.72
SCARB1-203ENST00000415380 GAP43P17677 238 aa19.54■□□□□ 0.72
SCARB1-203ENST00000415380 PTENP60484 403 aa19.54■□□□□ 0.72
SCARB1-203ENST00000415380 PRPF4BQ13523 1007 aaKnown RBP19.54■□□□□ 0.72
SCARB1-203ENST00000415380 FBXO11Q86XK2 927 aa19.54■□□□□ 0.72
SCARB1-203ENST00000415380 SYT11Q9BT88 431 aa19.54■□□□□ 0.72
SCARB1-203ENST00000415380 GPR88Q9GZN0 384 aa19.54■□□□□ 0.72
SCARB1-203ENST00000415380 ATP8A1Q9Y2Q0 1164 aa19.54■□□□□ 0.72
SCARB1-203ENST00000415380 PPFIA2O75334 1257 aa19.54■□□□□ 0.72
SCARB1-203ENST00000415380 CIITAP33076 1130 aa19.54■□□□□ 0.72
SCARB1-203ENST00000415380 FMO5P49326 533 aa19.54■□□□□ 0.72
SCARB1-203ENST00000415380 PLS1Q14651 629 aa19.54■□□□□ 0.72
SCARB1-203ENST00000415380 COG2Q14746 738 aa19.54■□□□□ 0.72
SCARB1-203ENST00000415380 ADAT2Q7Z6V5 191 aaKnown RBP19.54■□□□□ 0.72
SCARB1-203ENST00000415380 SIAH1Q8IUQ4 282 aa19.54■□□□□ 0.72
SCARB1-203ENST00000415380 CTNNBL1Q8WYA6 563 aaPredicted RBP19.54■□□□□ 0.72
SCARB1-203ENST00000415380 ARHGEF26Q96DR7 871 aa19.54■□□□□ 0.72
SCARB1-203ENST00000415380 NGLY1Q96IV0 654 aa19.54■□□□□ 0.72
SCARB1-203ENST00000415380 FMO2Q99518 471 aa19.54■□□□□ 0.72
SCARB1-203ENST00000415380 TXLNGYQ9BZA5 131 aa19.54■□□□□ 0.72
SCARB1-203ENST00000415380 PPEF1O14829 653 aaPredicted RBP19.53■□□□□ 0.72
SCARB1-203ENST00000415380 BACH1O14867 736 aa19.53■□□□□ 0.72
SCARB1-203ENST00000415380 EIF3DO15371 548 aaKnown RBP eCLIP19.53■□□□□ 0.721e-7■□□□□ 8.6
SCARB1-203ENST00000415380 FAM13AO94988 1023 aa19.53■□□□□ 0.72
SCARB1-203ENST00000415380 FOSP01100 380 aaPredicted RBP19.53■□□□□ 0.72
SCARB1-203ENST00000415380 HOXA13P31271 388 aaPredicted RBP19.53■□□□□ 0.72
SCARB1-203ENST00000415380 COPB2P35606 906 aa19.53■□□□□ 0.72
SCARB1-203ENST00000415380 DOK7Q18PE1 504 aa19.53■□□□□ 0.72
SCARB1-203ENST00000415380 CCDC121Q6ZUS5 278 aa19.53■□□□□ 0.72
SCARB1-203ENST00000415380 KSR1Q8IVT5 923 aa19.53■□□□□ 0.72
SCARB1-203ENST00000415380 MYCT1Q8N699 235 aa19.53■□□□□ 0.72
SCARB1-203ENST00000415380 RAB17Q9H0T7 212 aa19.53■□□□□ 0.72
SCARB1-203ENST00000415380 LRRC4BQ9NT99 713 aa19.53■□□□□ 0.72
SCARB1-203ENST00000415380 PPP1R12BO60237 982 aaPredicted RBP19.53■□□□□ 0.72
SCARB1-203ENST00000415380 IFFO1Q0D2I5 559 aa19.53■□□□□ 0.72
SCARB1-203ENST00000415380 DRP2Q13474 957 aa19.53■□□□□ 0.72
SCARB1-203ENST00000415380 CTTNQ14247 550 aaKnown RBP19.53■□□□□ 0.72
SCARB1-203ENST00000415380 PLCB4Q15147 1175 aa19.53■□□□□ 0.72
SCARB1-203ENST00000415380 CERKLQ49MI3 558 aaPredicted RBP19.53■□□□□ 0.72
SCARB1-203ENST00000415380 CBWD6Q4V339 395 aa19.53■□□□□ 0.72
SCARB1-203ENST00000415380 CBWD3Q5JTY5 395 aa19.53■□□□□ 0.72
SCARB1-203ENST00000415380 CBWD5Q5RIA9 395 aa19.53■□□□□ 0.72
SCARB1-203ENST00000415380 HHIPL2Q6UWX4 724 aa19.53■□□□□ 0.72
SCARB1-203ENST00000415380 SP8Q8IXZ3 490 aa19.53■□□□□ 0.72
SCARB1-203ENST00000415380 TEKT1Q969V4 418 aa19.53■□□□□ 0.72
SCARB1-203ENST00000415380 PSMD1Q99460 953 aa19.53■□□□□ 0.72
SCARB1-203ENST00000415380 ERVK-5Q9HDB9 667 aa19.53■□□□□ 0.72
SCARB1-203ENST00000415380 DIS3Q9Y2L1 958 aaKnown RBP19.53■□□□□ 0.72
SCARB1-203ENST00000415380 ADRA2BP18089 450 aa19.53■□□□□ 0.72
SCARB1-203ENST00000415380 CACNB3P54284 484 aa19.53■□□□□ 0.72
SCARB1-203ENST00000415380 DR1Q01658 176 aa19.53■□□□□ 0.72
SCARB1-203ENST00000415380 TCP10Q12799 353 aa19.53■□□□□ 0.72
SCARB1-203ENST00000415380 SLC30A10Q6XR72 485 aa19.53■□□□□ 0.72
SCARB1-203ENST00000415380 SEC16BQ96JE7 1060 aa19.53■□□□□ 0.72
SCARB1-203ENST00000415380 C5orf60A6NFR6 353 aa19.52■□□□□ 0.72
SCARB1-203ENST00000415380 MMP14P50281 582 aa19.52■□□□□ 0.72
SCARB1-203ENST00000415380 NFIL3Q16649 462 aa19.52■□□□□ 0.72
SCARB1-203ENST00000415380 DUPD1Q68J44 220 aa19.52■□□□□ 0.72
SCARB1-203ENST00000415380 TLCD1Q96CP7 247 aa19.52■□□□□ 0.72
SCARB1-203ENST00000415380 ZC3H12CQ9C0D7 883 aaKnown RBP19.52■□□□□ 0.72
SCARB1-203ENST00000415380 CARD9Q9H257 536 aa19.52■□□□□ 0.72
SCARB1-203ENST00000415380 TAS2R14Q9NYV8 317 aa19.52■□□□□ 0.72
SCARB1-203ENST00000415380 LRRC37AA6NMS7 1700 aa19.52■□□□□ 0.72
SCARB1-203ENST00000415380 F5H6K3 240 aa19.52■□□□□ 0.71
SCARB1-203ENST00000415380 OPLAHO14841 1288 aa19.52■□□□□ 0.71
SCARB1-203ENST00000415380 ZNF76P36508 570 aa19.52■□□□□ 0.71
SCARB1-203ENST00000415380 SMTNP53814 917 aa19.52■□□□□ 0.71
SCARB1-203ENST00000415380 KLRC3Q07444 240 aa19.52■□□□□ 0.71
SCARB1-203ENST00000415380 ZNF211Q13398 564 aaPredicted RBP19.52■□□□□ 0.71
SCARB1-203ENST00000415380 BYSLQ13895 437 aaKnown RBP19.52■□□□□ 0.71
SCARB1-203ENST00000415380 SLC15A2Q16348 729 aa19.52■□□□□ 0.71
SCARB1-203ENST00000415380 ERP44Q9BS26 406 aa19.52■□□□□ 0.71
SCARB1-203ENST00000415380 OSBPL7Q9BZF2 842 aa19.52■□□□□ 0.71
SCARB1-203ENST00000415380 INTS2Q9H0H0 1204 aaKnown RBP19.52■□□□□ 0.71
SCARB1-203ENST00000415380 THAP2Q9H0W7 228 aa19.52■□□□□ 0.71
SCARB1-203ENST00000415380 ZDHHC18Q9NUE0 388 aa19.52■□□□□ 0.71
SCARB1-203ENST00000415380 FRMPD4Q14CM0 1322 aa19.51■□□□□ 0.71
SCARB1-203ENST00000415380 TRIM49P0CI25 452 aa19.51■□□□□ 0.71
SCARB1-203ENST00000415380 TRIM49CP0CI26 452 aa19.51■□□□□ 0.71
SCARB1-203ENST00000415380 EIF3BP55884 814 aaKnown RBP19.51■□□□□ 0.71
SCARB1-203ENST00000415380 DDR1Q08345 913 aa19.51■□□□□ 0.71
SCARB1-203ENST00000415380 IKQ13123 557 aaPredicted RBP19.51■□□□□ 0.71
SCARB1-203ENST00000415380 SPRED3Q2MJR0 410 aa19.51■□□□□ 0.71
SCARB1-203ENST00000415380 SPDYCQ5MJ68 293 aa19.51■□□□□ 0.71
SCARB1-203ENST00000415380 C1orf186Q6ZWK4 172 aa19.51■□□□□ 0.71
SCARB1-203ENST00000415380 HSD17B14Q9BPX1 270 aa19.51■□□□□ 0.71
SCARB1-203ENST00000415380 MKNK1Q9BUB5 465 aa19.51■□□□□ 0.71
SCARB1-203ENST00000415380 COG5Q9UP83 839 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms