RNA–Protein interactions for RNA: ENST00000414543.5

TRIM27-203, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 1,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-203ENST00000414543 SMARCAD1Q9H4L7 1026 aa11.3□□□□□ -0.6
TRIM27-203ENST00000414543 KMT5AQ9NQR1 393 aa11.3□□□□□ -0.6
TRIM27-203ENST00000414543 EMSYQ7Z589 1322 aa11.29□□□□□ -0.6
TRIM27-203ENST00000414543 AKR1B15C9JRZ8 316 aaPredicted RBP11.29□□□□□ -0.6
TRIM27-203ENST00000414543 SLC16A4O15374 487 aa11.29□□□□□ -0.6
TRIM27-203ENST00000414543 TGFB1I1O43294 461 aa11.29□□□□□ -0.6
TRIM27-203ENST00000414543 CA12O43570 354 aa11.29□□□□□ -0.6
TRIM27-203ENST00000414543 PPP1R37O75864 691 aa11.29□□□□□ -0.6
TRIM27-203ENST00000414543 ALDH1A1P00352 501 aa11.29□□□□□ -0.6
TRIM27-203ENST00000414543 RFC5P40937 340 aa11.29□□□□□ -0.6
TRIM27-203ENST00000414543 ADCYAP1R1P41586 468 aa11.29□□□□□ -0.6
TRIM27-203ENST00000414543 SLC26A2P50443 739 aa11.29□□□□□ -0.6
TRIM27-203ENST00000414543 NCKAP1LP55160 1127 aa11.29□□□□□ -0.6
TRIM27-203ENST00000414543 MARSP56192 900 aaKnown RBP11.29□□□□□ -0.6
TRIM27-203ENST00000414543 RTP1P59025 263 aa11.29□□□□□ -0.6
TRIM27-203ENST00000414543 GTF2BQ00403 316 aa11.29□□□□□ -0.6
TRIM27-203ENST00000414543 ARHGAP1Q07960 439 aa11.29□□□□□ -0.6
TRIM27-203ENST00000414543 ACVR2BQ13705 512 aa11.29□□□□□ -0.6
TRIM27-203ENST00000414543 EMC2Q15006 297 aa11.29□□□□□ -0.6
TRIM27-203ENST00000414543 NFIL3Q16649 462 aa11.29□□□□□ -0.6
TRIM27-203ENST00000414543 TMEM63BQ5T3F8 832 aa11.29□□□□□ -0.6
TRIM27-203ENST00000414543 IQSEC1Q6DN90 963 aa11.29□□□□□ -0.6
TRIM27-203ENST00000414543 CYP4F22Q6NT55 531 aa11.29□□□□□ -0.6
TRIM27-203ENST00000414543 CCDC112Q8NEF3 446 aa11.29□□□□□ -0.6
TRIM27-203ENST00000414543 CPLX3Q8WVH0 158 aa11.29□□□□□ -0.6
TRIM27-203ENST00000414543 SPIRE2Q8WWL2 714 aa11.29□□□□□ -0.6
TRIM27-203ENST00000414543 BBXQ8WY36 941 aaPredicted RBP11.29□□□□□ -0.6
TRIM27-203ENST00000414543 PCMTD1Q96MG8 357 aaPredicted RBP11.29□□□□□ -0.6
TRIM27-203ENST00000414543 KATNBL1Q9H079 304 aa11.29□□□□□ -0.6
TRIM27-203ENST00000414543 POLR3FQ9H1D9 316 aaPredicted RBP11.29□□□□□ -0.6
TRIM27-203ENST00000414543 DHX33Q9H6R0 707 aaKnown RBP11.29□□□□□ -0.6
TRIM27-203ENST00000414543 XPNPEP1Q9NQW7 623 aa11.29□□□□□ -0.6
TRIM27-203ENST00000414543 ZHX1Q9UKY1 873 aaPredicted RBP11.29□□□□□ -0.6
TRIM27-203ENST00000414543 PYCARDQ9ULZ3 195 aa11.29□□□□□ -0.6
TRIM27-203ENST00000414543 PPME1Q9Y570 386 aa11.29□□□□□ -0.6
TRIM27-203ENST00000414543 ZMYM2Q9UBW7 1377 aa11.29□□□□□ -0.6
TRIM27-203ENST00000414543 H0YCG3 227 aa11.28□□□□□ -0.6
TRIM27-203ENST00000414543 TNPO2O14787 897 aaKnown RBP11.28□□□□□ -0.6
TRIM27-203ENST00000414543 ZNF500O60304 480 aaPredicted RBP11.28□□□□□ -0.6
TRIM27-203ENST00000414543 HOXC6P09630 235 aa11.28□□□□□ -0.6
TRIM27-203ENST00000414543 EPB41P11171 864 aaKnown RBP11.28□□□□□ -0.6
TRIM27-203ENST00000414543 MARK3P27448 753 aa11.28□□□□□ -0.6
TRIM27-203ENST00000414543 NPTX2P47972 431 aa11.28□□□□□ -0.6
TRIM27-203ENST00000414543 ADKP55263 362 aaKnown RBP11.28□□□□□ -0.6
TRIM27-203ENST00000414543 SOX10P56693 466 aa11.28□□□□□ -0.6
TRIM27-203ENST00000414543 CCZ1BP86790 482 aa11.28□□□□□ -0.6
TRIM27-203ENST00000414543 CCZ1P86791 482 aaPredicted RBP11.28□□□□□ -0.6
TRIM27-203ENST00000414543 RBL2Q08999 1139 aa11.28□□□□□ -0.6
TRIM27-203ENST00000414543 CEP135Q66GS9 1140 aa11.28□□□□□ -0.6
TRIM27-203ENST00000414543 FRMD5Q7Z6J6 570 aa11.28□□□□□ -0.6
TRIM27-203ENST00000414543 EXOC8Q8IYI6 725 aa11.28□□□□□ -0.6
TRIM27-203ENST00000414543 KIAA1524Q8TCG1 905 aa11.28□□□□□ -0.6
TRIM27-203ENST00000414543 HVCN1Q96D96 273 aa11.28□□□□□ -0.6
TRIM27-203ENST00000414543 ZIC5Q96T25 663 aa11.28□□□□□ -0.6
TRIM27-203ENST00000414543 NTPCRQ9BSD7 190 aaKnown RBP11.28□□□□□ -0.6
TRIM27-203ENST00000414543 METTL14Q9HCE5 456 aaKnown RBP11.28□□□□□ -0.6
TRIM27-203ENST00000414543 RRAGDQ9NQL2 400 aaPredicted RBP11.28□□□□□ -0.6
TRIM27-203ENST00000414543 CGNQ9P2M7 1197 aaKnown RBP11.28□□□□□ -0.6
TRIM27-203ENST00000414543 ARMCX3Q9UH62 379 aaPredicted RBP11.28□□□□□ -0.6
TRIM27-203ENST00000414543 FAM184BQ9ULE4 1060 aa11.28□□□□□ -0.6
TRIM27-203ENST00000414543 EXOC7Q9UPT5 735 aa11.28□□□□□ -0.6
TRIM27-203ENST00000414543 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.28□□□□□ -0.6
TRIM27-203ENST00000414543 NKRFO15226 690 aaKnown RBP eCLIP11.28□□□□□ -0.6
TRIM27-203ENST00000414543 SLC16A3O15427 465 aaKnown RBP11.28□□□□□ -0.6
TRIM27-203ENST00000414543 CASP14P31944 242 aa11.28□□□□□ -0.6
TRIM27-203ENST00000414543 ABCD1P33897 745 aa11.28□□□□□ -0.6
TRIM27-203ENST00000414543 RGS2P41220 211 aa11.28□□□□□ -0.6
TRIM27-203ENST00000414543 PPP2R3AQ06190 1150 aa11.28□□□□□ -0.6
TRIM27-203ENST00000414543 GOLGA8FQ08AF8 430 aa11.28□□□□□ -0.6
TRIM27-203ENST00000414543 GOLGA8DPQ0D2H9 430 aa11.28□□□□□ -0.6
TRIM27-203ENST00000414543 NOGQ13253 232 aa11.28□□□□□ -0.6
TRIM27-203ENST00000414543 PPP2R5AQ15172 486 aa11.28□□□□□ -0.6
TRIM27-203ENST00000414543 SYCP1Q15431 976 aa11.28□□□□□ -0.6
TRIM27-203ENST00000414543 TARBP2Q15633 366 aaKnown RBP11.28□□□□□ -0.6
TRIM27-203ENST00000414543 DUSP28Q4G0W2 176 aa11.28□□□□□ -0.6
TRIM27-203ENST00000414543 GJC2Q5T442 439 aaPredicted RBP11.28□□□□□ -0.6
TRIM27-203ENST00000414543 TRIM50Q86XT4 487 aa11.28□□□□□ -0.6
TRIM27-203ENST00000414543 CNGA4Q8IV77 575 aa11.28□□□□□ -0.6
TRIM27-203ENST00000414543 TRIM59Q8IWR1 403 aa11.28□□□□□ -0.6
TRIM27-203ENST00000414543 TC2NQ8N9U0 490 aa11.28□□□□□ -0.6
TRIM27-203ENST00000414543 PPTC7Q8NI37 304 aa11.28□□□□□ -0.6
TRIM27-203ENST00000414543 ATP8B4Q8TF62 1192 aa11.28□□□□□ -0.6
TRIM27-203ENST00000414543 SOCS4Q8WXH5 440 aa11.28□□□□□ -0.6
TRIM27-203ENST00000414543 EMID1Q96A84 441 aaPredicted RBP11.28□□□□□ -0.6
TRIM27-203ENST00000414543 NUP58Q9BVL2 599 aa11.28□□□□□ -0.6
TRIM27-203ENST00000414543 AGPAT3Q9NRZ7 376 aa11.28□□□□□ -0.6
TRIM27-203ENST00000414543 ERAP1Q9NZ08 941 aa11.28□□□□□ -0.6
TRIM27-203ENST00000414543 FRMD4BQ9Y2L6 1034 aa11.28□□□□□ -0.6
TRIM27-203ENST00000414543 DENND3A2RUS2 1198 aa11.27□□□□□ -0.61
TRIM27-203ENST00000414543 AKAP3O75969 853 aa11.27□□□□□ -0.61
TRIM27-203ENST00000414543 CYP2B6P20813 491 aa11.27□□□□□ -0.61
TRIM27-203ENST00000414543 PSMC2P35998 433 aaKnown RBP11.27□□□□□ -0.61
TRIM27-203ENST00000414543 CYP2J2P51589 502 aa11.27□□□□□ -0.61
TRIM27-203ENST00000414543 SNRPFP62306 86 aaKnown RBP11.27□□□□□ -0.61
TRIM27-203ENST00000414543 MYBPC2Q14324 1141 aa11.27□□□□□ -0.61
TRIM27-203ENST00000414543 PLCB4Q15147 1175 aa11.27□□□□□ -0.61
TRIM27-203ENST00000414543 DEFB115Q30KQ5 88 aa11.27□□□□□ -0.61
TRIM27-203ENST00000414543 TMEM161BQ8NDZ6 487 aa11.27□□□□□ -0.61
TRIM27-203ENST00000414543 BSNDQ8WZ55 320 aa11.27□□□□□ -0.61
TRIM27-203ENST00000414543 TMEM143Q96AN5 459 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms