RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 RANBP2P49792 3224 aaKnown RBP16.37■□□□□ 0.21
CHD1-202ENST00000414220 VWA3AA6NCI4 1184 aa16.37■□□□□ 0.21
CHD1-202ENST00000414220 SPATA31C1P0DKV0 1188 aa16.37■□□□□ 0.21
CHD1-202ENST00000414220 NCBP1Q09161 790 aaKnown RBP16.37■□□□□ 0.21
CHD1-202ENST00000414220 SF3A1Q15459 793 aaKnown RBP16.37■□□□□ 0.21
CHD1-202ENST00000414220 TCTN1Q2MV58 587 aa16.37■□□□□ 0.21
CHD1-202ENST00000414220 FAM117BQ6P1L5 589 aa16.37■□□□□ 0.21
CHD1-202ENST00000414220 MCPH1Q8NEM0 835 aa16.37■□□□□ 0.21
CHD1-202ENST00000414220 NLRP4Q96MN2 994 aa16.37■□□□□ 0.21
CHD1-202ENST00000414220 FAM161BQ96MY7 647 aa16.37■□□□□ 0.21
CHD1-202ENST00000414220 YME1L1Q96TA2 773 aa16.37■□□□□ 0.21
CHD1-202ENST00000414220 NT5C3AQ9H0P0 336 aa16.37■□□□□ 0.21
CHD1-202ENST00000414220 ADAMTS10Q9H324 1103 aa16.37■□□□□ 0.21
CHD1-202ENST00000414220 CDHR5Q9HBB8 845 aa16.37■□□□□ 0.21
CHD1-202ENST00000414220 ERVK-5Q9HDB9 667 aa16.37■□□□□ 0.21
CHD1-202ENST00000414220 MTMR6Q9Y217 621 aa16.37■□□□□ 0.21
CHD1-202ENST00000414220 A0A087WZ62 844 aa16.36■□□□□ 0.21
CHD1-202ENST00000414220 ZBTB39O15060 712 aa16.36■□□□□ 0.21
CHD1-202ENST00000414220 SLC26A4O43511 780 aa16.36■□□□□ 0.21
CHD1-202ENST00000414220 CA3P07451 260 aa16.36■□□□□ 0.21
CHD1-202ENST00000414220 DARSP14868 501 aaKnown RBP16.36■□□□□ 0.21
CHD1-202ENST00000414220 UBA7P41226 1012 aa16.36■□□□□ 0.21
CHD1-202ENST00000414220 POTEGQ6S5H5 508 aa16.36■□□□□ 0.21
CHD1-202ENST00000414220 Q7L0L9 218 aa16.36■□□□□ 0.21
CHD1-202ENST00000414220 FAM228AQ86W67 206 aa16.36■□□□□ 0.21
CHD1-202ENST00000414220 ZNF579Q8NAF0 562 aaKnown RBP16.36■□□□□ 0.21
CHD1-202ENST00000414220 PRPF31Q8WWY3 499 aaKnown RBP16.36■□□□□ 0.21
CHD1-202ENST00000414220 TMEM143Q96AN5 459 aa16.36■□□□□ 0.21
CHD1-202ENST00000414220 ZNF396Q96N95 335 aaPredicted RBP16.36■□□□□ 0.21
CHD1-202ENST00000414220 GAS2L1Q99501 681 aaPredicted RBP16.36■□□□□ 0.21
CHD1-202ENST00000414220 FDXACB1Q9BRP7 624 aaPredicted RBP16.36■□□□□ 0.21
CHD1-202ENST00000414220 OSBPL7Q9BZF2 842 aa16.36■□□□□ 0.21
CHD1-202ENST00000414220 TSPYL2Q9H2G4 693 aaPredicted RBP16.36■□□□□ 0.21
CHD1-202ENST00000414220 BMP2KQ9NSY1 1161 aaPredicted RBP16.36■□□□□ 0.21
CHD1-202ENST00000414220 MTMR10Q9NXD2 777 aa16.36■□□□□ 0.21
CHD1-202ENST00000414220 DACT1Q9NYF0 836 aa16.36■□□□□ 0.21
CHD1-202ENST00000414220 KIAA1024Q9UPX6 916 aa16.36■□□□□ 0.21
CHD1-202ENST00000414220 YBX2Q9Y2T7 364 aaKnown RBP16.36■□□□□ 0.21
CHD1-202ENST00000414220 PCDHB7Q9Y5E2 793 aa16.36■□□□□ 0.21
CHD1-202ENST00000414220 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.35■□□□□ 0.21
CHD1-202ENST00000414220 USO1O60763 962 aaKnown RBP16.35■□□□□ 0.21
CHD1-202ENST00000414220 SRGAP2CP0DJJ0 459 aa16.35■□□□□ 0.21
CHD1-202ENST00000414220 PHKA2P46019 1235 aa16.35■□□□□ 0.21
CHD1-202ENST00000414220 RESTQ13127 1097 aa16.35■□□□□ 0.21
CHD1-202ENST00000414220 MKRN4PQ13434 485 aaPredicted RBP16.35■□□□□ 0.21
CHD1-202ENST00000414220 DRP2Q13474 957 aa16.35■□□□□ 0.21
CHD1-202ENST00000414220 PCBP1Q15365 356 aaKnown RBP eCLIP16.35■□□□□ 0.21
CHD1-202ENST00000414220 ZRSR1Q15695 479 aaKnown RBP16.35■□□□□ 0.21
CHD1-202ENST00000414220 SLC24A5Q71RS6 500 aa16.35■□□□□ 0.21
CHD1-202ENST00000414220 SRGAP1Q7Z6B7 1085 aa16.35■□□□□ 0.21
CHD1-202ENST00000414220 NPAS4Q8IUM7 802 aa16.35■□□□□ 0.21
CHD1-202ENST00000414220 TET1Q8NFU7 2136 aa16.35■□□□□ 0.21
CHD1-202ENST00000414220 RASSF8Q8NHQ8 419 aa16.35■□□□□ 0.21
CHD1-202ENST00000414220 TMEM40Q8WWA1 233 aa16.35■□□□□ 0.21
CHD1-202ENST00000414220 CALML4Q96GE6 196 aa16.35■□□□□ 0.21
CHD1-202ENST00000414220 ZNF668Q96K58 619 aaPredicted RBP16.35■□□□□ 0.21
CHD1-202ENST00000414220 ADAM2Q99965 735 aa16.35■□□□□ 0.21
CHD1-202ENST00000414220 CHST12Q9NRB3 414 aa16.35■□□□□ 0.21
CHD1-202ENST00000414220 RGS18Q9NS28 235 aa16.35■□□□□ 0.21
CHD1-202ENST00000414220 DDX19AQ9NUU7 478 aaKnown RBP16.35■□□□□ 0.21
CHD1-202ENST00000414220 MYOGP15173 224 aa16.34■□□□□ 0.21
CHD1-202ENST00000414220 LONP1P36776 959 aaKnown RBP16.34■□□□□ 0.21
CHD1-202ENST00000414220 SARSP49591 514 aaKnown RBP16.34■□□□□ 0.21
CHD1-202ENST00000414220 LAMTOR4Q0VGL1 99 aa16.34■□□□□ 0.21
CHD1-202ENST00000414220 PADI6Q6TGC4 694 aa16.34■□□□□ 0.21
CHD1-202ENST00000414220 CATSPER4Q7RTX7 472 aa16.34■□□□□ 0.21
CHD1-202ENST00000414220 RNF149Q8NC42 400 aa16.34■□□□□ 0.21
CHD1-202ENST00000414220 SPRYD3Q8NCJ5 442 aa16.34■□□□□ 0.21
CHD1-202ENST00000414220 TTYH1Q9H313 450 aaPredicted RBP16.34■□□□□ 0.21
CHD1-202ENST00000414220 HOXA2O43364 376 aa16.33■□□□□ 0.2
CHD1-202ENST00000414220 SLC34A2O95436 690 aa16.33■□□□□ 0.2
CHD1-202ENST00000414220 SKIP12755 728 aa16.33■□□□□ 0.2
CHD1-202ENST00000414220 CYP11B2P19099 503 aa16.33■□□□□ 0.2
CHD1-202ENST00000414220 TXLNAP40222 546 aa16.33■□□□□ 0.2
CHD1-202ENST00000414220 HTRA4P83105 476 aaPredicted RBP16.33■□□□□ 0.2
CHD1-202ENST00000414220 POU5F1BQ06416 359 aa16.33■□□□□ 0.2
CHD1-202ENST00000414220 FAM102BQ5T8I3 360 aa16.33■□□□□ 0.2
CHD1-202ENST00000414220 TMCO2Q7Z6W1 182 aaPredicted RBP16.33■□□□□ 0.2
CHD1-202ENST00000414220 CABP7Q86V35 215 aa16.33■□□□□ 0.2
CHD1-202ENST00000414220 SAMD11Q96NU1 681 aa16.33■□□□□ 0.2
CHD1-202ENST00000414220 CDX2Q99626 313 aaPredicted RBP16.33■□□□□ 0.2
CHD1-202ENST00000414220 BHMT2Q9H2M3 363 aa16.33■□□□□ 0.2
CHD1-202ENST00000414220 TMX1Q9H3N1 280 aa16.33■□□□□ 0.2
CHD1-202ENST00000414220 KCNG1Q9UIX4 513 aa16.33■□□□□ 0.2
CHD1-202ENST00000414220 EVPLQ92817 2033 aa16.33■□□□□ 0.2
CHD1-202ENST00000414220 A0A087WWV3 80 aa16.32■□□□□ 0.2
CHD1-202ENST00000414220 ERLIN2O94905 339 aa16.32■□□□□ 0.2
CHD1-202ENST00000414220 EYA4O95677 639 aa16.32■□□□□ 0.2
CHD1-202ENST00000414220 IBSPP21815 317 aaPredicted RBP16.32■□□□□ 0.2
CHD1-202ENST00000414220 ARL2P36404 184 aa16.32■□□□□ 0.2
CHD1-202ENST00000414220 TAP1Q03518 808 aa16.32■□□□□ 0.2
CHD1-202ENST00000414220 CEBPZQ03701 1054 aaKnown RBP16.32■□□□□ 0.2
CHD1-202ENST00000414220 GRIN2CQ14957 1233 aa16.32■□□□□ 0.2
CHD1-202ENST00000414220 PPP2R5AQ15172 486 aa16.32■□□□□ 0.2
CHD1-202ENST00000414220 IL17AQ16552 155 aa16.32■□□□□ 0.2
CHD1-202ENST00000414220 MAEAQ7L5Y9 396 aa16.32■□□□□ 0.2
CHD1-202ENST00000414220 KSR1Q8IVT5 923 aa16.32■□□□□ 0.2
CHD1-202ENST00000414220 ZBTB8OSQ8IWT0 167 aa16.32■□□□□ 0.2
CHD1-202ENST00000414220 FIBCD1Q8N539 461 aa16.32■□□□□ 0.2
CHD1-202ENST00000414220 KIFAP3Q92845 792 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms