RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 GINS2Q9Y248 185 aa14.68□□□□□ -0.06
HDAC8-210ENST00000412342 TTC3P53804 2025 aa14.67□□□□□ -0.06
HDAC8-210ENST00000412342 E9PMD0 336 aa14.67□□□□□ -0.06
HDAC8-210ENST00000412342 EFCAB14O75071 495 aa14.67□□□□□ -0.06
HDAC8-210ENST00000412342 DARSP14868 501 aaKnown RBP14.67□□□□□ -0.06
HDAC8-210ENST00000412342 MARCKSP29966 332 aaPredicted RBP14.67□□□□□ -0.06
HDAC8-210ENST00000412342 DDIT3P35638 169 aa14.67□□□□□ -0.06
HDAC8-210ENST00000412342 LONP1P36776 959 aaKnown RBP14.67□□□□□ -0.06
HDAC8-210ENST00000412342 PBX2P40425 430 aa14.67□□□□□ -0.06
HDAC8-210ENST00000412342 CEBPZQ03701 1054 aaKnown RBP14.67□□□□□ -0.06
HDAC8-210ENST00000412342 TMEM119Q4V9L6 283 aa14.67□□□□□ -0.06
HDAC8-210ENST00000412342 RTN4RL1Q86UN2 441 aaPredicted RBP14.67□□□□□ -0.06
HDAC8-210ENST00000412342 KSR1Q8IVT5 923 aa14.67□□□□□ -0.06
HDAC8-210ENST00000412342 LINC00301Q8NCQ3 95 aa14.67□□□□□ -0.06
HDAC8-210ENST00000412342 PHOSPHO2Q8TCD6 241 aa14.67□□□□□ -0.06
HDAC8-210ENST00000412342 LRRC15Q8TF66 581 aa14.67□□□□□ -0.06
HDAC8-210ENST00000412342 MTRQ99707 1265 aa14.67□□□□□ -0.06
HDAC8-210ENST00000412342 PBX4Q9BYU1 374 aa14.67□□□□□ -0.06
HDAC8-210ENST00000412342 ATP6V0A4Q9HBG4 840 aa14.67□□□□□ -0.06
HDAC8-210ENST00000412342 SRPRBQ9Y5M8 271 aaKnown RBP14.67□□□□□ -0.06
HDAC8-210ENST00000412342 COL4A3BPQ9Y5P4 624 aa14.67□□□□□ -0.06
HDAC8-210ENST00000412342 A0A087WZ62 844 aa14.66□□□□□ -0.06
HDAC8-210ENST00000412342 USO1O60763 962 aaKnown RBP14.66□□□□□ -0.06
HDAC8-210ENST00000412342 RPS6KA5O75582 802 aa14.66□□□□□ -0.06
HDAC8-210ENST00000412342 ATP2A2P16615 1042 aaKnown RBP14.66□□□□□ -0.06
HDAC8-210ENST00000412342 EIF4BP23588 611 aaKnown RBP14.66□□□□□ -0.06
HDAC8-210ENST00000412342 ARL2P36404 184 aa14.66□□□□□ -0.06
HDAC8-210ENST00000412342 DNM2P50570 870 aa14.66□□□□□ -0.06
HDAC8-210ENST00000412342 PAK2Q13177 524 aa14.66□□□□□ -0.06
HDAC8-210ENST00000412342 GPR153Q6NV75 609 aa14.66□□□□□ -0.06
HDAC8-210ENST00000412342 PADI6Q6TGC4 694 aa14.66□□□□□ -0.06
HDAC8-210ENST00000412342 USP49Q70CQ1 688 aa14.66□□□□□ -0.06
HDAC8-210ENST00000412342 TMCO2Q7Z6W1 182 aaPredicted RBP14.66□□□□□ -0.06
HDAC8-210ENST00000412342 ZNF410Q86VK4 478 aa14.66□□□□□ -0.06
HDAC8-210ENST00000412342 RHPN2Q8IUC4 686 aa14.66□□□□□ -0.06
HDAC8-210ENST00000412342 HERC6Q8IVU3 1022 aa14.66□□□□□ -0.06
HDAC8-210ENST00000412342 ASAP3Q8TDY4 903 aa14.66□□□□□ -0.06
HDAC8-210ENST00000412342 PRPF31Q8WWY3 499 aaKnown RBP14.66□□□□□ -0.06
HDAC8-210ENST00000412342 PSPC1Q8WXF1 523 aaKnown RBP14.66□□□□□ -0.06
HDAC8-210ENST00000412342 FDXACB1Q9BRP7 624 aaPredicted RBP14.66□□□□□ -0.06
HDAC8-210ENST00000412342 CSRNP2Q9H175 543 aa14.66□□□□□ -0.06
HDAC8-210ENST00000412342 BHMT2Q9H2M3 363 aa14.66□□□□□ -0.06
HDAC8-210ENST00000412342 IFT122Q9HBG6 1241 aa14.66□□□□□ -0.06
HDAC8-210ENST00000412342 YBX2Q9Y2T7 364 aaKnown RBP14.66□□□□□ -0.06
HDAC8-210ENST00000412342 CHD9Q3L8U1 2897 aa14.65□□□□□ -0.06
HDAC8-210ENST00000412342 SLC26A4O43511 780 aa14.65□□□□□ -0.06
HDAC8-210ENST00000412342 MGEA5O60502 916 aa14.65□□□□□ -0.06
HDAC8-210ENST00000412342 YEATS4O95619 227 aa14.65□□□□□ -0.06
HDAC8-210ENST00000412342 EYA4O95677 639 aa14.65□□□□□ -0.06
HDAC8-210ENST00000412342 CYP11B2P19099 503 aa14.65□□□□□ -0.06
HDAC8-210ENST00000412342 GLRA2P23416 452 aa14.65□□□□□ -0.06
HDAC8-210ENST00000412342 KCNJ6P48051 423 aa14.65□□□□□ -0.06
HDAC8-210ENST00000412342 RABGGTBP53611 331 aa14.65□□□□□ -0.06
HDAC8-210ENST00000412342 CDC42EP1Q00587 391 aa14.65□□□□□ -0.06
HDAC8-210ENST00000412342 LAMTOR4Q0VGL1 99 aa14.65□□□□□ -0.06
HDAC8-210ENST00000412342 DSC3Q14574 896 aa14.65□□□□□ -0.06
HDAC8-210ENST00000412342 CABP7Q86V35 215 aa14.65□□□□□ -0.06
HDAC8-210ENST00000412342 CRIPAKQ8N1N5 446 aa14.65□□□□□ -0.06
HDAC8-210ENST00000412342 KCTD17Q8N5Z5 321 aa14.65□□□□□ -0.06
HDAC8-210ENST00000412342 TCP11Q8WWU5 503 aa14.65□□□□□ -0.06
HDAC8-210ENST00000412342 ZNF396Q96N95 335 aaPredicted RBP14.65□□□□□ -0.06
HDAC8-210ENST00000412342 CLIC6Q96NY7 704 aa14.65□□□□□ -0.06
HDAC8-210ENST00000412342 CCSER1Q9C0I3 900 aa14.65□□□□□ -0.06
HDAC8-210ENST00000412342 GPRC5CQ9NQ84 441 aa14.65□□□□□ -0.06
HDAC8-210ENST00000412342 TFIP11Q9UBB9 837 aaKnown RBP14.65□□□□□ -0.06
HDAC8-210ENST00000412342 ST3GAL5Q9UNP4 418 aa14.65□□□□□ -0.06
HDAC8-210ENST00000412342 TCHHQ07283 1943 aa14.64□□□□□ -0.07
HDAC8-210ENST00000412342 ARHGEF35A5YM69 484 aa14.64□□□□□ -0.07
HDAC8-210ENST00000412342 ENPP3O14638 875 aa14.64□□□□□ -0.07
HDAC8-210ENST00000412342 GJB5O95377 273 aa14.64□□□□□ -0.07
HDAC8-210ENST00000412342 DNAJB2P25686 324 aa14.64□□□□□ -0.07
HDAC8-210ENST00000412342 CAPSQ13938 189 aa14.64□□□□□ -0.07
HDAC8-210ENST00000412342 FAM43BQ6ZT52 329 aaPredicted RBP14.64□□□□□ -0.07
HDAC8-210ENST00000412342 IFNLR1Q8IU57 520 aaPredicted RBP14.64□□□□□ -0.07
HDAC8-210ENST00000412342 MCPH1Q8NEM0 835 aa14.64□□□□□ -0.07
HDAC8-210ENST00000412342 NLRP7Q8WX94 980 aa14.64□□□□□ -0.07
HDAC8-210ENST00000412342 EPSTI1Q96J88 318 aa14.64□□□□□ -0.07
HDAC8-210ENST00000412342 NLRP4Q96MN2 994 aa14.64□□□□□ -0.07
HDAC8-210ENST00000412342 CCDC43Q96MW1 224 aaKnown RBP14.64□□□□□ -0.07
HDAC8-210ENST00000412342 FTHL17Q9BXU8 183 aa14.64□□□□□ -0.07
HDAC8-210ENST00000412342 NT5C3AQ9H0P0 336 aa14.64□□□□□ -0.07
HDAC8-210ENST00000412342 POLR3FQ9H1D9 316 aaPredicted RBP14.64□□□□□ -0.07
HDAC8-210ENST00000412342 TSPYL2Q9H2G4 693 aaPredicted RBP14.64□□□□□ -0.07
HDAC8-210ENST00000412342 CDH23Q9H251 3354 aa14.63□□□□□ -0.07
HDAC8-210ENST00000412342 GPR182O15218 404 aa14.63□□□□□ -0.07
HDAC8-210ENST00000412342 SPTLC2O15270 562 aa14.63□□□□□ -0.07
HDAC8-210ENST00000412342 ASAP2O43150 1006 aa14.63□□□□□ -0.07
HDAC8-210ENST00000412342 PPP6R2O75170 966 aa14.63□□□□□ -0.07
HDAC8-210ENST00000412342 CSDE1O75534 798 aaKnown RBP14.63□□□□□ -0.07
HDAC8-210ENST00000412342 AMHP03971 560 aa14.63□□□□□ -0.07
HDAC8-210ENST00000412342 MYOGP15173 224 aa14.63□□□□□ -0.07
HDAC8-210ENST00000412342 FGFR4P22455 802 aa14.63□□□□□ -0.07
HDAC8-210ENST00000412342 UBA7P41226 1012 aa14.63□□□□□ -0.07
HDAC8-210ENST00000412342 DNM1Q05193 864 aaKnown RBP14.63□□□□□ -0.07
HDAC8-210ENST00000412342 POU5F1BQ06416 359 aa14.63□□□□□ -0.07
HDAC8-210ENST00000412342 NFX1Q12986 1120 aaKnown RBP14.63□□□□□ -0.07
HDAC8-210ENST00000412342 KARSQ15046 597 aaKnown RBP14.63□□□□□ -0.07
HDAC8-210ENST00000412342 STK38Q15208 465 aa14.63□□□□□ -0.07
HDAC8-210ENST00000412342 FOXD4L6Q3SYB3 417 aaPredicted RBP14.63□□□□□ -0.07
HDAC8-210ENST00000412342 SPECC1Q5M775 1068 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms