RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 ERCC4Q92889 916 aaPredicted RBP5.57□□□□□ -1.52
BRCA1-204ENST00000412061 TTC17Q96AE7 1141 aa5.57□□□□□ -1.52
BRCA1-204ENST00000412061 ACAP3Q96P50 834 aa5.57□□□□□ -1.52
BRCA1-204ENST00000412061 PAGR1Q9BTK6 254 aa5.57□□□□□ -1.52
BRCA1-204ENST00000412061 SLC13A1Q9BZW2 595 aa5.57□□□□□ -1.52
BRCA1-204ENST00000412061 ZNF552Q9H707 407 aaPredicted RBP5.57□□□□□ -1.52
BRCA1-204ENST00000412061 PLCB1Q9NQ66 1216 aa5.57□□□□□ -1.52
BRCA1-204ENST00000412061 ARHGAP28Q9P2N2 729 aa5.57□□□□□ -1.52
BRCA1-204ENST00000412061 KCNG1Q9UIX4 513 aa5.57□□□□□ -1.52
BRCA1-204ENST00000412061 PHTF1Q9UMS5 762 aa5.57□□□□□ -1.52
BRCA1-204ENST00000412061 GIT1Q9Y2X7 761 aa5.57□□□□□ -1.52
BRCA1-204ENST00000412061 SCINQ9Y6U3 715 aa5.57□□□□□ -1.52
BRCA1-204ENST00000412061 GOLGA6L22H0YM25 854 aa5.56□□□□□ -1.52
BRCA1-204ENST00000412061 ERC2O15083 957 aa5.56□□□□□ -1.52
BRCA1-204ENST00000412061 PMM2O15305 246 aa5.56□□□□□ -1.52
BRCA1-204ENST00000412061 NBNO60934 754 aa5.56□□□□□ -1.52
BRCA1-204ENST00000412061 HSP90AA1P07900 732 aaKnown RBP5.56□□□□□ -1.52
BRCA1-204ENST00000412061 TMEM253P0C7T8 217 aa5.56□□□□□ -1.52
BRCA1-204ENST00000412061 STAT5AP42229 794 aa5.56□□□□□ -1.52
BRCA1-204ENST00000412061 ZNF280AP59817 542 aaPredicted RBP5.56□□□□□ -1.52
BRCA1-204ENST00000412061 NKX3-2P78367 333 aa5.56□□□□□ -1.52
BRCA1-204ENST00000412061 ZNF200P98182 395 aaPredicted RBP5.56□□□□□ -1.52
BRCA1-204ENST00000412061 TTC38Q5R3I4 469 aa5.56□□□□□ -1.52
BRCA1-204ENST00000412061 CD276Q5ZPR3 534 aa5.56□□□□□ -1.52
BRCA1-204ENST00000412061 TIGD7Q6NT04 549 aaPredicted RBP5.56□□□□□ -1.52
BRCA1-204ENST00000412061 MPZL3Q6UWV2 235 aa5.56□□□□□ -1.52
BRCA1-204ENST00000412061 ESPNLQ6ZVH7 1005 aa5.56□□□□□ -1.52
BRCA1-204ENST00000412061 RTN4RL1Q86UN2 441 aaPredicted RBP5.56□□□□□ -1.52
BRCA1-204ENST00000412061 ZC3H18Q86VM9 953 aaKnown RBP5.56□□□□□ -1.52
BRCA1-204ENST00000412061 ZNF354CQ86Y25 554 aa5.56□□□□□ -1.52
BRCA1-204ENST00000412061 CILP2Q8IUL8 1156 aa5.56□□□□□ -1.52
BRCA1-204ENST00000412061 IFNL2Q8IZJ0 200 aa5.56□□□□□ -1.52
BRCA1-204ENST00000412061 TEX19Q8NA77 164 aa5.56□□□□□ -1.52
BRCA1-204ENST00000412061 C1orf162Q8NEQ5 155 aaPredicted RBP5.56□□□□□ -1.52
BRCA1-204ENST00000412061 LMBR1Q8WVP7 490 aa5.56□□□□□ -1.52
BRCA1-204ENST00000412061 RUNDC1Q96C34 613 aa5.56□□□□□ -1.52
BRCA1-204ENST00000412061 TNIP3Q96KP6 325 aa5.56□□□□□ -1.52
BRCA1-204ENST00000412061 HERPUD2Q9BSE4 406 aa5.56□□□□□ -1.52
BRCA1-204ENST00000412061 AS3MTQ9HBK9 375 aa5.56□□□□□ -1.52
BRCA1-204ENST00000412061 BTBD7Q9P203 1132 aa5.56□□□□□ -1.52
BRCA1-204ENST00000412061 PRAMEF22A3QJZ6 481 aa5.55□□□□□ -1.52
BRCA1-204ENST00000412061 LCHNA4D1U4 455 aa5.55□□□□□ -1.52
BRCA1-204ENST00000412061 FZD9O00144 591 aa5.55□□□□□ -1.52
BRCA1-204ENST00000412061 SLC26A4O43511 780 aa5.55□□□□□ -1.52
BRCA1-204ENST00000412061 PIP5K1CO60331 668 aa5.55□□□□□ -1.52
BRCA1-204ENST00000412061 PAPLNO95428 1278 aa5.55□□□□□ -1.52
BRCA1-204ENST00000412061 ASGR2P07307 311 aa5.55□□□□□ -1.52
BRCA1-204ENST00000412061 ENO2P09104 434 aaPredicted RBP5.55□□□□□ -1.52
BRCA1-204ENST00000412061 COL6A1P12109 1028 aa5.55□□□□□ -1.52
BRCA1-204ENST00000412061 NCAM1P13591 858 aa5.55□□□□□ -1.52
BRCA1-204ENST00000412061 PTGS1P23219 599 aa5.55□□□□□ -1.52
BRCA1-204ENST00000412061 VIPR1P32241 457 aa5.55□□□□□ -1.52
BRCA1-204ENST00000412061 KRT85P78386 507 aa5.55□□□□□ -1.52
BRCA1-204ENST00000412061 FZD5Q13467 585 aa5.55□□□□□ -1.52
BRCA1-204ENST00000412061 GALEQ14376 348 aa5.55□□□□□ -1.52
BRCA1-204ENST00000412061 ODF1Q14990 250 aa5.55□□□□□ -1.52
BRCA1-204ENST00000412061 PDCD1Q15116 288 aa5.55□□□□□ -1.52
BRCA1-204ENST00000412061 ALFQ53S48 1182 aa5.55□□□□□ -1.52
BRCA1-204ENST00000412061 TMEM240Q5SV17 173 aa5.55□□□□□ -1.52
BRCA1-204ENST00000412061 EFCAB2Q5VUJ9 269 aa5.55□□□□□ -1.52
BRCA1-204ENST00000412061 PRAMEF18Q5VWM3 479 aa5.55□□□□□ -1.52
BRCA1-204ENST00000412061 PGM2L1Q6PCE3 622 aa5.55□□□□□ -1.52
BRCA1-204ENST00000412061 ZNF605Q86T29 641 aa5.55□□□□□ -1.52
BRCA1-204ENST00000412061 CXorf67Q86X51 503 aaPredicted RBP5.55□□□□□ -1.52
BRCA1-204ENST00000412061 CMIPQ8IY22 773 aa5.55□□□□□ -1.52
BRCA1-204ENST00000412061 CPA5Q8WXQ8 436 aa5.55□□□□□ -1.52
BRCA1-204ENST00000412061 GJA10Q969M2 543 aa5.55□□□□□ -1.52
BRCA1-204ENST00000412061 FOXRED1Q96CU9 486 aaPredicted RBP5.55□□□□□ -1.52
BRCA1-204ENST00000412061 ZNF496Q96IT1 587 aaPredicted RBP5.55□□□□□ -1.52
BRCA1-204ENST00000412061 FAXDC2Q96IV6 333 aa5.55□□□□□ -1.52
BRCA1-204ENST00000412061 SCLT1Q96NL6 688 aa5.55□□□□□ -1.52
BRCA1-204ENST00000412061 TUBGCP5Q96RT8 1024 aa5.55□□□□□ -1.52
BRCA1-204ENST00000412061 FOXB1Q99853 325 aa5.55□□□□□ -1.52
BRCA1-204ENST00000412061 RNF38Q9H0F5 515 aa5.55□□□□□ -1.52
BRCA1-204ENST00000412061 SLC12A5Q9H2X9 1139 aa5.55□□□□□ -1.52
BRCA1-204ENST00000412061 MKS1Q9NXB0 559 aa5.55□□□□□ -1.52
BRCA1-204ENST00000412061 NRBP1Q9UHY1 535 aa5.55□□□□□ -1.52
BRCA1-204ENST00000412061 KAT6BQ8WYB5 2073 aa5.55□□□□□ -1.52
BRCA1-204ENST00000412061 KLRG2A4D1S0 409 aaPredicted RBP5.54□□□□□ -1.52
BRCA1-204ENST00000412061 TRIM75PA6NK02 468 aa5.54□□□□□ -1.52
BRCA1-204ENST00000412061 RBP3P10745 1247 aa5.54□□□□□ -1.52
BRCA1-204ENST00000412061 JUNBP17275 347 aaPredicted RBP5.54□□□□□ -1.52
BRCA1-204ENST00000412061 GPR3P46089 330 aa5.54□□□□□ -1.52
BRCA1-204ENST00000412061 SRSF3P84103 164 aaKnown RBP5.54□□□□□ -1.52
BRCA1-204ENST00000412061 ROM1Q03395 351 aa5.54□□□□□ -1.52
BRCA1-204ENST00000412061 CACNB2Q08289 660 aaPredicted RBP5.54□□□□□ -1.52
BRCA1-204ENST00000412061 STK3Q13188 491 aa5.54□□□□□ -1.52
BRCA1-204ENST00000412061 CR1LQ2VPA4 569 aa5.54□□□□□ -1.52
BRCA1-204ENST00000412061 SLC4A8Q2Y0W8 1093 aa5.54□□□□□ -1.52
BRCA1-204ENST00000412061 VASNQ6EMK4 673 aa5.54□□□□□ -1.52
BRCA1-204ENST00000412061 CD300LDQ6UXZ3 194 aa5.54□□□□□ -1.52
BRCA1-204ENST00000412061 SRLQ86TD4 932 aa5.54□□□□□ -1.52
BRCA1-204ENST00000412061 CALML6Q8TD86 181 aa5.54□□□□□ -1.52
BRCA1-204ENST00000412061 FAM168AQ92567 244 aa5.54□□□□□ -1.52
BRCA1-204ENST00000412061 FERMT2Q96AC1 680 aa5.54□□□□□ -1.52
BRCA1-204ENST00000412061 HSPBAP1Q96EW2 488 aa5.54□□□□□ -1.52
BRCA1-204ENST00000412061 MAML3Q96JK9 1138 aa5.54□□□□□ -1.52
BRCA1-204ENST00000412061 AIFM3Q96NN9 605 aa5.54□□□□□ -1.52
BRCA1-204ENST00000412061 POFUT1Q9H488 388 aa5.54□□□□□ -1.52
BRCA1-204ENST00000412061 NLRC4Q9NPP4 1024 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms