RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 NEK8Q86SG6 692 aa16.58■□□□□ 0.24
CBX3-203ENST00000409747 ABI1Q8IZP0 508 aa16.58■□□□□ 0.24
CBX3-203ENST00000409747 NLRP7Q8WX94 980 aa16.58■□□□□ 0.24
CBX3-203ENST00000409747 GJA10Q969M2 543 aa16.58■□□□□ 0.24
CBX3-203ENST00000409747 FAM20AQ96MK3 541 aa16.58■□□□□ 0.24
CBX3-203ENST00000409747 JPH2Q9BR39 696 aaPredicted RBP16.58■□□□□ 0.24
CBX3-203ENST00000409747 TMEM117Q9H0C3 514 aa16.58■□□□□ 0.24
CBX3-203ENST00000409747 KCNJ14Q9UNX9 436 aa16.58■□□□□ 0.24
CBX3-203ENST00000409747 DARSP14868 501 aaKnown RBP16.57■□□□□ 0.24
CBX3-203ENST00000409747 LTBRP36941 435 aa16.57■□□□□ 0.24
CBX3-203ENST00000409747 MTERF2Q49AM1 385 aa16.57■□□□□ 0.24
CBX3-203ENST00000409747 TMEM31Q5JXX7 168 aa16.57■□□□□ 0.24
CBX3-203ENST00000409747 FAM102BQ5T8I3 360 aa16.57■□□□□ 0.24
CBX3-203ENST00000409747 PPP4R3AQ6IN85 833 aa16.57■□□□□ 0.24
CBX3-203ENST00000409747 IGFLR1Q9H665 355 aa16.57■□□□□ 0.24
CBX3-203ENST00000409747 EPHX3Q9H6B9 360 aa16.57■□□□□ 0.24
CBX3-203ENST00000409747 TPCN1Q9ULQ1 816 aa16.57■□□□□ 0.24
CBX3-203ENST00000409747 PLXNA4Q9HCM2 1894 aa16.57■□□□□ 0.24
CBX3-203ENST00000409747 FGFR1P11362 822 aa16.56■□□□□ 0.24
CBX3-203ENST00000409747 DNAJB1P25685 340 aa16.56■□□□□ 0.24
CBX3-203ENST00000409747 PSMC5P62195 406 aa16.56■□□□□ 0.24
CBX3-203ENST00000409747 PPP2R5CQ13362 524 aa16.56■□□□□ 0.24
CBX3-203ENST00000409747 PDE12Q6L8Q7 609 aaKnown RBP16.56■□□□□ 0.24
CBX3-203ENST00000409747 THNSL1Q8IYQ7 743 aa16.56■□□□□ 0.24
CBX3-203ENST00000409747 LRRC43Q8N309 656 aa16.56■□□□□ 0.24
CBX3-203ENST00000409747 POP1Q99575 1024 aaKnown RBP16.56■□□□□ 0.24
CBX3-203ENST00000409747 GCOM2Q9BZD3 368 aaPredicted RBP16.56■□□□□ 0.24
CBX3-203ENST00000409747 CD320Q9NPF0 282 aa16.56■□□□□ 0.24
CBX3-203ENST00000409747 TYW1Q9NV66 732 aaKnown RBP16.56■□□□□ 0.24
CBX3-203ENST00000409747 DACT1Q9NYF0 836 aa16.56■□□□□ 0.24
CBX3-203ENST00000409747 PI4K2BG5E9Z4 385 aa16.56■□□□□ 0.24
CBX3-203ENST00000409747 TBX3O15119 743 aa16.56■□□□□ 0.24
CBX3-203ENST00000409747 SLC37A4O43826 429 aa16.56■□□□□ 0.24
CBX3-203ENST00000409747 FGF18O76093 207 aa16.56■□□□□ 0.24
CBX3-203ENST00000409747 NDUFV1P49821 464 aa16.56■□□□□ 0.24
CBX3-203ENST00000409747 SMAD4Q13485 552 aaKnown RBP16.56■□□□□ 0.24
CBX3-203ENST00000409747 ADHFE1Q8IWW8 467 aa16.56■□□□□ 0.24
CBX3-203ENST00000409747 EFHBQ8N7U6 833 aa16.56■□□□□ 0.24
CBX3-203ENST00000409747 COLGALT1Q8NBJ5 622 aa16.56■□□□□ 0.24
CBX3-203ENST00000409747 RSPH1Q8WYR4 309 aa16.56■□□□□ 0.24
CBX3-203ENST00000409747 BRMS1Q9HCU9 246 aa16.56■□□□□ 0.24
CBX3-203ENST00000409747 TLR9Q9NR96 1032 aa16.56■□□□□ 0.24
CBX3-203ENST00000409747 CD207Q9UJ71 328 aa16.56■□□□□ 0.24
CBX3-203ENST00000409747 MYO7AQ13402 2215 aa16.55■□□□□ 0.24
CBX3-203ENST00000409747 DDX11L8A8MPP1 907 aa16.55■□□□□ 0.24
CBX3-203ENST00000409747 TBX10O75333 385 aa16.55■□□□□ 0.24
CBX3-203ENST00000409747 ALADP13716 330 aa16.55■□□□□ 0.24
CBX3-203ENST00000409747 SFPQP23246 707 aaKnown RBP eCLIP16.55■□□□□ 0.24
CBX3-203ENST00000409747 PPM1AP35813 382 aa16.55■□□□□ 0.24
CBX3-203ENST00000409747 ZP2Q05996 745 aa16.55■□□□□ 0.24
CBX3-203ENST00000409747 ADAM15Q13444 863 aa16.55■□□□□ 0.24
CBX3-203ENST00000409747 ZNF410Q86VK4 478 aa16.55■□□□□ 0.24
CBX3-203ENST00000409747 ECHDC2Q86YB7 292 aa16.55■□□□□ 0.24
CBX3-203ENST00000409747 EXOC8Q8IYI6 725 aa16.55■□□□□ 0.24
CBX3-203ENST00000409747 MICAL1Q8TDZ2 1067 aa16.55■□□□□ 0.24
CBX3-203ENST00000409747 INO80BQ9C086 356 aaPredicted RBP16.55■□□□□ 0.24
CBX3-203ENST00000409747 KCNMB3Q9NPA1 279 aa16.55■□□□□ 0.24
CBX3-203ENST00000409747 CHST12Q9NRB3 414 aa16.55■□□□□ 0.24
CBX3-203ENST00000409747 ORC3Q9UBD5 711 aaPredicted RBP16.55■□□□□ 0.24
CBX3-203ENST00000409747 PPME1Q9Y570 386 aa16.55■□□□□ 0.24
CBX3-203ENST00000409747 IGKV6-21A0A0C4DH24 114 aa16.54■□□□□ 0.24
CBX3-203ENST00000409747 MBTPS2O43462 519 aa16.54■□□□□ 0.24
CBX3-203ENST00000409747 MARCH6O60337 910 aa16.54■□□□□ 0.24
CBX3-203ENST00000409747 CCNT1O60563 726 aaKnown RBP16.54■□□□□ 0.24
CBX3-203ENST00000409747 GPR37L1O60883 481 aa16.54■□□□□ 0.24
CBX3-203ENST00000409747 MAFO75444 373 aaPredicted RBP16.54■□□□□ 0.24
CBX3-203ENST00000409747 EOMESO95936 686 aa16.54■□□□□ 0.24
CBX3-203ENST00000409747 GTF2F1P35269 517 aaKnown RBP eCLIP16.54■□□□□ 0.24
CBX3-203ENST00000409747 IRS1P35568 1242 aa16.54■□□□□ 0.24
CBX3-203ENST00000409747 QARSP47897 775 aaKnown RBP16.54■□□□□ 0.24
CBX3-203ENST00000409747 AK2P54819 239 aa16.54■□□□□ 0.24
CBX3-203ENST00000409747 DLX2Q07687 328 aaPredicted RBP16.54■□□□□ 0.24
CBX3-203ENST00000409747 SMAD2Q15796 467 aaKnown RBP16.54■□□□□ 0.24
CBX3-203ENST00000409747 PIK3AP1Q6ZUJ8 805 aa16.54■□□□□ 0.24
CBX3-203ENST00000409747 ADGRD2Q7Z7M1 963 aa16.54■□□□□ 0.24
CBX3-203ENST00000409747 KHSRPQ92945 711 aaKnown RBP eCLIP16.54■□□□□ 0.242e-6■■□□□ 13.8
CBX3-203ENST00000409747 CDCA3Q99618 268 aaPredicted RBP16.54■□□□□ 0.24
CBX3-203ENST00000409747 CWH43Q9H720 699 aa16.54■□□□□ 0.24
CBX3-203ENST00000409747 PUF60Q9UHX1 559 aaKnown RBP16.54■□□□□ 0.24
CBX3-203ENST00000409747 VAV3Q9UKW4 847 aa16.54■□□□□ 0.24
CBX3-203ENST00000409747 LZTS1Q9Y250 596 aa16.54■□□□□ 0.24
CBX3-203ENST00000409747 A0A0U1RQF3 1178 aa16.53■□□□□ 0.24
CBX3-203ENST00000409747 STBD1O95210 358 aa16.53■□□□□ 0.24
CBX3-203ENST00000409747 NRIP1P48552 1158 aa16.53■□□□□ 0.24
CBX3-203ENST00000409747 CLUL1Q15846 466 aa16.53■□□□□ 0.24
CBX3-203ENST00000409747 SLC7A3Q8WY07 619 aa16.53■□□□□ 0.24
CBX3-203ENST00000409747 ZNF668Q96K58 619 aaPredicted RBP16.53■□□□□ 0.24
CBX3-203ENST00000409747 CASD1Q96PB1 797 aa16.53■□□□□ 0.24
CBX3-203ENST00000409747 CEP89Q96ST8 783 aa16.53■□□□□ 0.24
CBX3-203ENST00000409747 LRFN3Q9BTN0 628 aa16.53■□□□□ 0.24
CBX3-203ENST00000409747 MRPL9Q9BYD2 267 aaKnown RBP16.53■□□□□ 0.24
CBX3-203ENST00000409747 TLE6Q9H808 572 aa16.53■□□□□ 0.24
CBX3-203ENST00000409747 SUCLA2Q9P2R7 463 aaPredicted RBP16.53■□□□□ 0.24
CBX3-203ENST00000409747 HCN4Q9Y3Q4 1203 aa16.53■□□□□ 0.24
CBX3-203ENST00000409747 TMEM150BA6NC51 233 aa16.53■□□□□ 0.24
CBX3-203ENST00000409747 LINC01565O15544 149 aa16.53■□□□□ 0.24
CBX3-203ENST00000409747 P4HBP07237 508 aaKnown RBP16.53■□□□□ 0.24
CBX3-203ENST00000409747 SKIP12755 728 aa16.53■□□□□ 0.24
CBX3-203ENST00000409747 KRT2P35908 639 aa16.53■□□□□ 0.24
CBX3-203ENST00000409747 PLCB3Q01970 1234 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms