RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 EEF1GP26641 437 aaKnown RBP13.72□□□□□ -0.21
CHMP3-204ENST00000409727 NPTX2P47972 431 aa13.72□□□□□ -0.21
CHMP3-204ENST00000409727 FLT3LGP49771 235 aa13.72□□□□□ -0.21
CHMP3-204ENST00000409727 CHMP4BP1P59074 171 aa13.72□□□□□ -0.21
CHMP3-204ENST00000409727 FKBP3Q00688 224 aaKnown RBP13.72□□□□□ -0.21
CHMP3-204ENST00000409727 CAP1Q01518 475 aa13.72□□□□□ -0.21
CHMP3-204ENST00000409727 NR1I3Q14994 352 aa13.72□□□□□ -0.21
CHMP3-204ENST00000409727 BMT2Q1RMZ1 405 aa13.72□□□□□ -0.21
CHMP3-204ENST00000409727 OLFML2BQ68BL8 750 aa13.72□□□□□ -0.21
CHMP3-204ENST00000409727 PLPPR4Q7Z2D5 763 aa13.72□□□□□ -0.21
CHMP3-204ENST00000409727 SYCP3Q8IZU3 236 aa13.72□□□□□ -0.21
CHMP3-204ENST00000409727 TRAPPC12Q8WVT3 735 aa13.72□□□□□ -0.21
CHMP3-204ENST00000409727 BBXQ8WY36 941 aaPredicted RBP13.72□□□□□ -0.21
CHMP3-204ENST00000409727 KIFAP3Q92845 792 aa13.72□□□□□ -0.21
CHMP3-204ENST00000409727 FAM167AQ96KS9 214 aa13.72□□□□□ -0.21
CHMP3-204ENST00000409727 PCDHB13Q9Y5F0 798 aa13.72□□□□□ -0.21
CHMP3-204ENST00000409727 ZMYM2Q9UBW7 1377 aa13.71□□□□□ -0.21
CHMP3-204ENST00000409727 MGAMO43451 1857 aa13.71□□□□□ -0.21
CHMP3-204ENST00000409727 CALUO43852 315 aaPredicted RBP13.71□□□□□ -0.21
CHMP3-204ENST00000409727 ZNF865P0CJ78 1059 aaPredicted RBP13.71□□□□□ -0.21
CHMP3-204ENST00000409727 NR2F2P24468 414 aa13.71□□□□□ -0.21
CHMP3-204ENST00000409727 IGBP1P78318 339 aa13.71□□□□□ -0.21
CHMP3-204ENST00000409727 SP3Q02447 781 aa13.71□□□□□ -0.21
CHMP3-204ENST00000409727 PRKCZQ05513 592 aa13.71□□□□□ -0.21
CHMP3-204ENST00000409727 ADAM9Q13443 819 aa13.71□□□□□ -0.21
CHMP3-204ENST00000409727 ARID5BQ14865 1188 aa13.71□□□□□ -0.21
CHMP3-204ENST00000409727 HAUS6Q7Z4H7 955 aa13.71□□□□□ -0.21
CHMP3-204ENST00000409727 VSTM4Q8IW00 320 aa13.71□□□□□ -0.21
CHMP3-204ENST00000409727 ATP8B4Q8TF62 1192 aa13.71□□□□□ -0.21
CHMP3-204ENST00000409727 EMID1Q96A84 441 aaPredicted RBP13.71□□□□□ -0.21
CHMP3-204ENST00000409727 ZBTB10Q96DT7 871 aa13.71□□□□□ -0.21
CHMP3-204ENST00000409727 TUBGCP2Q9BSJ2 902 aa13.71□□□□□ -0.21
CHMP3-204ENST00000409727 RNPEPQ9H4A4 650 aa13.71□□□□□ -0.21
CHMP3-204ENST00000409727 SUGCTQ9HAC7 445 aa13.71□□□□□ -0.21
CHMP3-204ENST00000409727 KMT5AQ9NQR1 393 aa13.71□□□□□ -0.21
CHMP3-204ENST00000409727 PDLIM7Q9NR12 457 aa13.71□□□□□ -0.21
CHMP3-204ENST00000409727 TYW1Q9NV66 732 aaKnown RBP13.71□□□□□ -0.21
CHMP3-204ENST00000409727 RNF186Q9NXI6 227 aa13.71□□□□□ -0.21
CHMP3-204ENST00000409727 ERAP1Q9NZ08 941 aa13.71□□□□□ -0.21
CHMP3-204ENST00000409727 TGFB1I1O43294 461 aa13.7□□□□□ -0.22
CHMP3-204ENST00000409727 MMP3P08254 477 aa13.7□□□□□ -0.22
CHMP3-204ENST00000409727 SMTNP53814 917 aa13.7□□□□□ -0.22
CHMP3-204ENST00000409727 IRX5P78411 483 aaPredicted RBP13.7□□□□□ -0.22
CHMP3-204ENST00000409727 TBC1D8BQ0IIM8 1120 aa13.7□□□□□ -0.22
CHMP3-204ENST00000409727 KIF22Q14807 665 aa13.7□□□□□ -0.22
CHMP3-204ENST00000409727 TARBP2Q15633 366 aaKnown RBP13.7□□□□□ -0.22
CHMP3-204ENST00000409727 CCDC40Q4G0X9 1142 aa13.7□□□□□ -0.22
CHMP3-204ENST00000409727 REM2Q8IYK8 340 aaPredicted RBP13.7□□□□□ -0.22
CHMP3-204ENST00000409727 CEP89Q96ST8 783 aa13.7□□□□□ -0.22
CHMP3-204ENST00000409727 DHX33Q9H6R0 707 aaKnown RBP13.7□□□□□ -0.22
CHMP3-204ENST00000409727 RTN4Q9NQC3 1192 aaKnown RBP13.7□□□□□ -0.22
CHMP3-204ENST00000409727 PDXKO00764 312 aa13.7□□□□□ -0.22
CHMP3-204ENST00000409727 PPP1R37O75864 691 aa13.7□□□□□ -0.22
CHMP3-204ENST00000409727 NR3C1P04150 777 aa13.7□□□□□ -0.22
CHMP3-204ENST00000409727 RFC5P40937 340 aa13.7□□□□□ -0.22
CHMP3-204ENST00000409727 UBXN1Q04323 297 aa13.7□□□□□ -0.22
CHMP3-204ENST00000409727 DRP2Q13474 957 aa13.7□□□□□ -0.22
CHMP3-204ENST00000409727 EDRF1Q3B7T1 1238 aa13.7□□□□□ -0.22
CHMP3-204ENST00000409727 TLK2Q86UE8 772 aa13.7□□□□□ -0.22
CHMP3-204ENST00000409727 LRRC71Q8N4P6 559 aa13.7□□□□□ -0.22
CHMP3-204ENST00000409727 TRIB2Q92519 343 aa13.7□□□□□ -0.22
CHMP3-204ENST00000409727 IFT74Q96LB3 600 aa13.7□□□□□ -0.22
CHMP3-204ENST00000409727 NOC4LQ9BVI4 516 aaKnown RBP13.7□□□□□ -0.22
CHMP3-204ENST00000409727 TRAF3IP3Q9Y228 551 aa13.7□□□□□ -0.22
CHMP3-204ENST00000409727 UBE4BO95155 1302 aa13.69□□□□□ -0.22
CHMP3-204ENST00000409727 ADGRA3Q8IWK6 1321 aa13.69□□□□□ -0.22
CHMP3-204ENST00000409727 DENND3A2RUS2 1198 aa13.69□□□□□ -0.22
CHMP3-204ENST00000409727 LRRC10BA6NIK2 292 aa13.69□□□□□ -0.22
CHMP3-204ENST00000409727 ZBTB42B2RXF5 422 aa13.69□□□□□ -0.22
CHMP3-204ENST00000409727 TISP43B9A030 160 aa13.69□□□□□ -0.22
CHMP3-204ENST00000409727 CETN3O15182 167 aa13.69□□□□□ -0.22
CHMP3-204ENST00000409727 PPFIA4O75335 1185 aa13.69□□□□□ -0.22
CHMP3-204ENST00000409727 TPM2P07951 284 aa13.69□□□□□ -0.22
CHMP3-204ENST00000409727 MAPTP10636 758 aaKnown RBP13.69□□□□□ -0.22
CHMP3-204ENST00000409727 SLC26A2P50443 739 aa13.69□□□□□ -0.22
CHMP3-204ENST00000409727 NCKAP1LP55160 1127 aa13.69□□□□□ -0.22
CHMP3-204ENST00000409727 GOLGA8FQ08AF8 430 aa13.69□□□□□ -0.22
CHMP3-204ENST00000409727 GOLGA8DPQ0D2H9 430 aa13.69□□□□□ -0.22
CHMP3-204ENST00000409727 CEP135Q66GS9 1140 aa13.69□□□□□ -0.22
CHMP3-204ENST00000409727 ASAP3Q8TDY4 903 aa13.69□□□□□ -0.22
CHMP3-204ENST00000409727 PPP1R13LQ8WUF5 828 aa13.69□□□□□ -0.22
CHMP3-204ENST00000409727 C16orf70Q9BSU1 422 aa13.69□□□□□ -0.22
CHMP3-204ENST00000409727 STRA6Q9BX79 667 aa13.69□□□□□ -0.22
CHMP3-204ENST00000409727 GBP3Q9H0R5 595 aa13.69□□□□□ -0.22
CHMP3-204ENST00000409727 GNEQ9Y223 722 aaKnown RBP13.69□□□□□ -0.22
CHMP3-204ENST00000409727 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.69□□□□□ -0.22
CHMP3-204ENST00000409727 PCNTO95613 3336 aa13.69□□□□□ -0.22
CHMP3-204ENST00000409727 LRRIQ4A6NIV6 560 aa13.68□□□□□ -0.22
CHMP3-204ENST00000409727 H3BRB1 525 aa13.68□□□□□ -0.22
CHMP3-204ENST00000409727 HBP1O60381 514 aa13.68□□□□□ -0.22
CHMP3-204ENST00000409727 GLRA2P23416 452 aa13.68□□□□□ -0.22
CHMP3-204ENST00000409727 CNGA1P29973 690 aa13.68□□□□□ -0.22
CHMP3-204ENST00000409727 CYP2J2P51589 502 aa13.68□□□□□ -0.22
CHMP3-204ENST00000409727 TRIM32Q13049 653 aa13.68□□□□□ -0.22
CHMP3-204ENST00000409727 DGKDQ16760 1214 aa13.68□□□□□ -0.22
CHMP3-204ENST00000409727 SPECC1LQ69YQ0 1117 aa13.68□□□□□ -0.22
CHMP3-204ENST00000409727 HS2ST1Q7LGA3 356 aa13.68□□□□□ -0.22
CHMP3-204ENST00000409727 METTL13Q8N6R0 699 aa13.68□□□□□ -0.22
CHMP3-204ENST00000409727 TMEM161BQ8NDZ6 487 aa13.68□□□□□ -0.22
CHMP3-204ENST00000409727 CD99L2Q8TCZ2 262 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms