RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 ERAP1Q9NZ08 941 aa12.38□□□□□ -0.43
SNX13-202ENST00000409604 COL20A1Q9P218 1284 aa12.38□□□□□ -0.43
SNX13-202ENST00000409604 AGO2Q9UKV8 859 aaKnown RBP12.38□□□□□ -0.43
SNX13-202ENST00000409604 KCNH4Q9UQ05 1017 aa12.38□□□□□ -0.43
SNX13-202ENST00000409604 PQBP1O60828 265 aaKnown RBP12.38□□□□□ -0.43
SNX13-202ENST00000409604 RDXP35241 583 aaKnown RBP12.38□□□□□ -0.43
SNX13-202ENST00000409604 AMHR2Q16671 573 aa12.38□□□□□ -0.43
SNX13-202ENST00000409604 ANKS1AQ92625 1134 aa12.38□□□□□ -0.43
SNX13-202ENST00000409604 FAM167AQ96KS9 214 aa12.38□□□□□ -0.43
SNX13-202ENST00000409604 RIT2Q99578 217 aa12.38□□□□□ -0.43
SNX13-202ENST00000409604 HYOU1Q9Y4L1 999 aa12.38□□□□□ -0.43
SNX13-202ENST00000409604 EMSYQ7Z589 1322 aa12.38□□□□□ -0.43
SNX13-202ENST00000409604 GON4LQ3T8J9 2241 aa12.38□□□□□ -0.43
SNX13-202ENST00000409604 TMEM88BA6NKF7 163 aa12.38□□□□□ -0.43
SNX13-202ENST00000409604 DGAT1O75907 488 aa12.38□□□□□ -0.43
SNX13-202ENST00000409604 INSRRP14616 1297 aa12.38□□□□□ -0.43
SNX13-202ENST00000409604 ORC1Q13415 861 aa12.38□□□□□ -0.43
SNX13-202ENST00000409604 MESDQ14696 234 aa12.38□□□□□ -0.43
SNX13-202ENST00000409604 VWA3BQ502W6 1294 aa12.38□□□□□ -0.43
SNX13-202ENST00000409604 DEFB128Q7Z7B8 93 aa12.38□□□□□ -0.43
SNX13-202ENST00000409604 TMTC1Q8IUR5 882 aa12.38□□□□□ -0.43
SNX13-202ENST00000409604 SPDYE5A6NIY4 337 aa12.37□□□□□ -0.43
SNX13-202ENST00000409604 CAPN15O75808 1086 aa12.37□□□□□ -0.43
SNX13-202ENST00000409604 LMAN1P49257 510 aa12.37□□□□□ -0.43
SNX13-202ENST00000409604 PPP2R5DQ14738 602 aa12.37□□□□□ -0.43
SNX13-202ENST00000409604 DGKDQ16760 1214 aa12.37□□□□□ -0.43
SNX13-202ENST00000409604 SLC35G1Q2M3R5 365 aa12.37□□□□□ -0.43
SNX13-202ENST00000409604 DSTYKQ6XUX3 929 aa12.37□□□□□ -0.43
SNX13-202ENST00000409604 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.37□□□□□ -0.43
SNX13-202ENST00000409604 TMEM106CQ9BVX2 250 aa12.37□□□□□ -0.43
SNX13-202ENST00000409604 RANBP17Q9H2T7 1088 aaKnown RBP12.37□□□□□ -0.43
SNX13-202ENST00000409604 AGO4Q9HCK5 861 aaKnown RBP12.37□□□□□ -0.43
SNX13-202ENST00000409604 EPN1Q9Y6I3 576 aaPredicted RBP12.37□□□□□ -0.43
SNX13-202ENST00000409604 C4BP0C0L5 1744 aa12.37□□□□□ -0.43
SNX13-202ENST00000409604 H0YCG3 227 aa12.37□□□□□ -0.43
SNX13-202ENST00000409604 ARHGAP6O43182 974 aa12.37□□□□□ -0.43
SNX13-202ENST00000409604 CIITAP33076 1130 aa12.37□□□□□ -0.43
SNX13-202ENST00000409604 EIF4A3P38919 411 aaKnown RBP12.37□□□□□ -0.43
SNX13-202ENST00000409604 TMEM270Q6UE05 265 aa12.37□□□□□ -0.43
SNX13-202ENST00000409604 SIAH1Q8IUQ4 282 aa12.37□□□□□ -0.43
SNX13-202ENST00000409604 CPB2Q96IY4 423 aa12.37□□□□□ -0.43
SNX13-202ENST00000409604 HEXIM2Q96MH2 286 aaKnown RBP12.37□□□□□ -0.43
SNX13-202ENST00000409604 NUP58Q9BVL2 599 aa12.37□□□□□ -0.43
SNX13-202ENST00000409604 CARD6Q9BX69 1037 aa12.37□□□□□ -0.43
SNX13-202ENST00000409604 PDE11AQ9HCR9 933 aa12.37□□□□□ -0.43
SNX13-202ENST00000409604 FAM184BQ9ULE4 1060 aa12.37□□□□□ -0.43
SNX13-202ENST00000409604 CAPN9O14815 690 aa12.37□□□□□ -0.43
SNX13-202ENST00000409604 PPM1FP49593 454 aaPredicted RBP12.37□□□□□ -0.43
SNX13-202ENST00000409604 GLIPR1L2Q4G1C9 344 aa12.37□□□□□ -0.43
SNX13-202ENST00000409604 KAZNQ674X7 775 aa12.37□□□□□ -0.43
SNX13-202ENST00000409604 GPR142Q7Z601 462 aa12.37□□□□□ -0.43
SNX13-202ENST00000409604 DAAM2Q86T65 1068 aa12.37□□□□□ -0.43
SNX13-202ENST00000409604 CCDC60Q8IWA6 550 aaPredicted RBP12.37□□□□□ -0.43
SNX13-202ENST00000409604 HAS1Q92839 578 aa12.37□□□□□ -0.43
SNX13-202ENST00000409604 ZNF653Q96CK0 615 aa12.37□□□□□ -0.43
SNX13-202ENST00000409604 KIF12Q96FN5 646 aa12.37□□□□□ -0.43
SNX13-202ENST00000409604 CBWD1Q9BRT8 395 aa12.37□□□□□ -0.43
SNX13-202ENST00000409604 COL18A1P39060 1754 aa12.37□□□□□ -0.43
SNX13-202ENST00000409604 PVALEFA0A1B0GWK0 134 aa12.36□□□□□ -0.43
SNX13-202ENST00000409604 TBC1D12O60347 775 aa12.36□□□□□ -0.43
SNX13-202ENST00000409604 SLITRK3O94933 977 aa12.36□□□□□ -0.43
SNX13-202ENST00000409604 OATP04181 439 aa12.36□□□□□ -0.43
SNX13-202ENST00000409604 EEF1GP26641 437 aaKnown RBP12.36□□□□□ -0.43
SNX13-202ENST00000409604 MAPK4P31152 587 aa12.36□□□□□ -0.43
SNX13-202ENST00000409604 MTF1Q14872 753 aa12.36□□□□□ -0.43
SNX13-202ENST00000409604 WDR72Q3MJ13 1102 aa12.36□□□□□ -0.43
SNX13-202ENST00000409604 HSDL1Q3SXM5 330 aa12.36□□□□□ -0.43
SNX13-202ENST00000409604 GJB7Q6PEY0 223 aa12.36□□□□□ -0.43
SNX13-202ENST00000409604 DNAAF5Q86Y56 855 aa12.36□□□□□ -0.43
SNX13-202ENST00000409604 DHX40Q8IX18 779 aaKnown RBP12.36□□□□□ -0.43
SNX13-202ENST00000409604 TCP11Q8WWU5 503 aa12.36□□□□□ -0.43
SNX13-202ENST00000409604 CYP26B1Q9NR63 512 aa12.36□□□□□ -0.43
SNX13-202ENST00000409604 HESX1Q9UBX0 185 aa12.36□□□□□ -0.43
SNX13-202ENST00000409604 A0A087WZ62 844 aa12.36□□□□□ -0.43
SNX13-202ENST00000409604 IKBKBO14920 756 aa12.36□□□□□ -0.43
SNX13-202ENST00000409604 IL17AQ16552 155 aa12.36□□□□□ -0.43
SNX13-202ENST00000409604 OTOP1Q7RTM1 612 aa12.36□□□□□ -0.43
SNX13-202ENST00000409604 HASPINQ8TF76 798 aa12.36□□□□□ -0.43
SNX13-202ENST00000409604 SECISBP2LQ93073 1101 aaKnown RBP12.36□□□□□ -0.43
SNX13-202ENST00000409604 FDXACB1Q9BRP7 624 aaPredicted RBP12.36□□□□□ -0.43
SNX13-202ENST00000409604 GCOM2Q9BZD3 368 aaPredicted RBP12.36□□□□□ -0.43
SNX13-202ENST00000409604 TXNRD2Q9NNW7 524 aa12.36□□□□□ -0.43
SNX13-202ENST00000409604 TUFT1Q9NNX1 390 aa12.36□□□□□ -0.43
SNX13-202ENST00000409604 DNAJC12Q9UKB3 198 aa12.36□□□□□ -0.43
SNX13-202ENST00000409604 PRG3Q9Y2Y8 225 aaPredicted RBP12.36□□□□□ -0.43
SNX13-202ENST00000409604 BTAF1O14981 1849 aa12.36□□□□□ -0.43
SNX13-202ENST00000409604 CTAGE15A4D2H0 777 aa12.36□□□□□ -0.43
SNX13-202ENST00000409604 DAPK3O43293 454 aa12.36□□□□□ -0.43
SNX13-202ENST00000409604 CTAGE8P0CG41 777 aa12.36□□□□□ -0.43
SNX13-202ENST00000409604 GNAT1P11488 350 aa12.36□□□□□ -0.43
SNX13-202ENST00000409604 UBA1P22314 1058 aaKnown RBP12.36□□□□□ -0.43
SNX13-202ENST00000409604 PDE6CP51160 858 aa12.36□□□□□ -0.43
SNX13-202ENST00000409604 APBA1Q02410 837 aa12.36□□□□□ -0.43
SNX13-202ENST00000409604 PTK2Q05397 1052 aa12.36□□□□□ -0.43
SNX13-202ENST00000409604 EHHADHQ08426 723 aa12.36□□□□□ -0.43
SNX13-202ENST00000409604 CTAGE6Q86UF2 777 aa12.36□□□□□ -0.43
SNX13-202ENST00000409604 CTAGE4Q8IX94 777 aa12.36□□□□□ -0.43
SNX13-202ENST00000409604 BRI3BPQ8WY22 251 aa12.36□□□□□ -0.43
SNX13-202ENST00000409604 KCNG1Q9UIX4 513 aa12.36□□□□□ -0.43
SNX13-202ENST00000409604 TFR2Q9UP52 801 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms