RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 CALCRLQ16602 461 aa21.98■■□□□ 1.11
TSPAN4-209ENST00000409543 PLA2G4FQ68DD2 849 aa21.98■■□□□ 1.11
TSPAN4-209ENST00000409543 C4orf19Q8IY42 314 aa21.98■■□□□ 1.11
TSPAN4-209ENST00000409543 NLRP7Q8WX94 980 aa21.98■■□□□ 1.11
TSPAN4-209ENST00000409543 ZNF668Q96K58 619 aaPredicted RBP21.98■■□□□ 1.11
TSPAN4-209ENST00000409543 SCLT1Q96NL6 688 aa21.98■■□□□ 1.11
TSPAN4-209ENST00000409543 LMAN2LQ9H0V9 348 aa21.98■■□□□ 1.11
TSPAN4-209ENST00000409543 ELAC1Q9H777 363 aaKnown RBP21.98■■□□□ 1.11
TSPAN4-209ENST00000409543 WRAP73Q9P2S5 460 aaPredicted RBP21.98■■□□□ 1.11
TSPAN4-209ENST00000409543 PCDHA12Q9UN75 941 aa21.98■■□□□ 1.11
TSPAN4-209ENST00000409543 PPME1Q9Y570 386 aa21.98■■□□□ 1.11
TSPAN4-209ENST00000409543 BMP1P13497 986 aa21.97■■□□□ 1.11
TSPAN4-209ENST00000409543 HMGN5P82970 282 aaKnown RBP21.97■■□□□ 1.11
TSPAN4-209ENST00000409543 PAN2Q504Q3 1202 aaKnown RBP21.97■■□□□ 1.11
TSPAN4-209ENST00000409543 TIGD5Q53EQ6 642 aa21.97■■□□□ 1.11
TSPAN4-209ENST00000409543 EXOC8Q8IYI6 725 aa21.97■■□□□ 1.11
TSPAN4-209ENST00000409543 P2RX5Q93086 422 aa21.97■■□□□ 1.11
TSPAN4-209ENST00000409543 C8orf76Q96K31 380 aa21.97■■□□□ 1.11
TSPAN4-209ENST00000409543 LXNQ9BS40 222 aa21.97■■□□□ 1.11
TSPAN4-209ENST00000409543 GCOM2Q9BZD3 368 aaPredicted RBP21.97■■□□□ 1.11
TSPAN4-209ENST00000409543 TMEM161AQ9NX61 479 aa21.97■■□□□ 1.11
TSPAN4-209ENST00000409543 RGL1Q9NZL6 768 aa21.97■■□□□ 1.11
TSPAN4-209ENST00000409543 SUCLA2Q9P2R7 463 aaPredicted RBP21.97■■□□□ 1.11
TSPAN4-209ENST00000409543 NEMFO60524 1076 aa21.96■■□□□ 1.11
TSPAN4-209ENST00000409543 ZSCAN20P17040 1043 aaPredicted RBP21.96■■□□□ 1.11
TSPAN4-209ENST00000409543 IBSPP21815 317 aaPredicted RBP21.96■■□□□ 1.11
TSPAN4-209ENST00000409543 GATMP50440 423 aa21.96■■□□□ 1.11
TSPAN4-209ENST00000409543 NPEPPSP55786 919 aa21.96■■□□□ 1.11
TSPAN4-209ENST00000409543 GUCY1B3Q02153 619 aa21.96■■□□□ 1.11
TSPAN4-209ENST00000409543 NAALADL2Q58DX5 795 aa21.96■■□□□ 1.11
TSPAN4-209ENST00000409543 OTUD6AQ7L8S5 288 aa21.96■■□□□ 1.11
TSPAN4-209ENST00000409543 ADAMTS19Q8TE59 1207 aa21.96■■□□□ 1.11
TSPAN4-209ENST00000409543 SLC7A3Q8WY07 619 aa21.96■■□□□ 1.11
TSPAN4-209ENST00000409543 DYDC2Q96IM9 177 aa21.96■■□□□ 1.11
TSPAN4-209ENST00000409543 CEP170P1Q96L14 293 aa21.96■■□□□ 1.11
TSPAN4-209ENST00000409543 MTMR9Q96QG7 549 aa21.96■■□□□ 1.11
TSPAN4-209ENST00000409543 ZSWIM4Q9H7M6 989 aa21.96■■□□□ 1.11
TSPAN4-209ENST00000409543 ATP6V0A4Q9HBG4 840 aa21.96■■□□□ 1.11
TSPAN4-209ENST00000409543 WNT7AO00755 349 aa21.95■■□□□ 1.1
TSPAN4-209ENST00000409543 GRM6O15303 877 aa21.95■■□□□ 1.1
TSPAN4-209ENST00000409543 YWHABP31946 246 aaKnown RBP21.95■■□□□ 1.1
TSPAN4-209ENST00000409543 RFC5P40937 340 aa21.95■■□□□ 1.1
TSPAN4-209ENST00000409543 KCNQ1P51787 676 aa21.95■■□□□ 1.1
TSPAN4-209ENST00000409543 RABEP1Q15276 862 aa21.95■■□□□ 1.1
TSPAN4-209ENST00000409543 FAM102BQ5T8I3 360 aa21.95■■□□□ 1.1
TSPAN4-209ENST00000409543 ZNF410Q86VK4 478 aa21.95■■□□□ 1.1
TSPAN4-209ENST00000409543 ZNF579Q8NAF0 562 aaKnown RBP21.95■■□□□ 1.1
TSPAN4-209ENST00000409543 NSUN3Q9H649 340 aaKnown RBP21.95■■□□□ 1.1
TSPAN4-209ENST00000409543 TTC12Q9H892 705 aaPredicted RBP21.95■■□□□ 1.1
TSPAN4-209ENST00000409543 XIRP2A4UGR9 3374 aa21.95■■□□□ 1.1
TSPAN4-209ENST00000409543 BRWD1Q9NSI6 2320 aa21.94■■□□□ 1.1
TSPAN4-209ENST00000409543 SPTBN5Q9NRC6 3674 aaKnown RBP21.94■■□□□ 1.1
TSPAN4-209ENST00000409543 A0A087WZ62 844 aa21.94■■□□□ 1.1
TSPAN4-209ENST00000409543 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.94■■□□□ 1.1
TSPAN4-209ENST00000409543 SLITRK3O94933 977 aa21.94■■□□□ 1.1
TSPAN4-209ENST00000409543 TXKP42681 527 aa21.94■■□□□ 1.1
TSPAN4-209ENST00000409543 CYP4A11Q02928 519 aa21.94■■□□□ 1.1
TSPAN4-209ENST00000409543 CTTNQ14247 550 aaKnown RBP21.94■■□□□ 1.1
TSPAN4-209ENST00000409543 RHPN2Q8IUC4 686 aa21.94■■□□□ 1.1
TSPAN4-209ENST00000409543 FAM184AQ8NB25 1140 aa21.94■■□□□ 1.1
TSPAN4-209ENST00000409543 FBXO18Q8NFZ0 1043 aa21.94■■□□□ 1.1
TSPAN4-209ENST00000409543 HSD17B14Q9BPX1 270 aa21.94■■□□□ 1.1
TSPAN4-209ENST00000409543 EIF2AK1Q9BQI3 630 aaKnown RBP21.94■■□□□ 1.1
TSPAN4-209ENST00000409543 FDXACB1Q9BRP7 624 aaPredicted RBP21.94■■□□□ 1.1
TSPAN4-209ENST00000409543 INO80BQ9C086 356 aaPredicted RBP21.94■■□□□ 1.1
TSPAN4-209ENST00000409543 FOXP1Q9H334 677 aaPredicted RBP21.94■■□□□ 1.1
TSPAN4-209ENST00000409543 DHX33Q9H6R0 707 aaKnown RBP21.94■■□□□ 1.1
TSPAN4-209ENST00000409543 PLAGL2Q9UPG8 496 aa21.94■■□□□ 1.1
TSPAN4-209ENST00000409543 FNDC1Q4ZHG4 1894 aaPredicted RBP21.94■■□□□ 1.1
TSPAN4-209ENST00000409543 TBKBP1A7MCY6 615 aa21.93■■□□□ 1.1
TSPAN4-209ENST00000409543 FGFR4P22455 802 aa21.93■■□□□ 1.1
TSPAN4-209ENST00000409543 POLGP54098 1239 aaPredicted RBP21.93■■□□□ 1.1
TSPAN4-209ENST00000409543 TCEAL5Q5H9L2 206 aa21.93■■□□□ 1.1
TSPAN4-209ENST00000409543 TPH2Q8IWU9 490 aa21.93■■□□□ 1.1
TSPAN4-209ENST00000409543 NEK9Q8TD19 979 aa21.93■■□□□ 1.1
TSPAN4-209ENST00000409543 UBE2ZQ9H832 354 aaPredicted RBP21.93■■□□□ 1.1
TSPAN4-209ENST00000409543 CHST12Q9NRB3 414 aa21.93■■□□□ 1.1
TSPAN4-209ENST00000409543 KIAA1671Q9BY89 1806 aa21.92■■□□□ 1.1
TSPAN4-209ENST00000409543 A0A0U1RQF3 1178 aa21.92■■□□□ 1.1
TSPAN4-209ENST00000409543 HOXA2O43364 376 aa21.92■■□□□ 1.1
TSPAN4-209ENST00000409543 CSDE1O75534 798 aaKnown RBP21.92■■□□□ 1.1
TSPAN4-209ENST00000409543 LYPLA2O95372 231 aa21.92■■□□□ 1.1
TSPAN4-209ENST00000409543 FGFR1P11362 822 aa21.92■■□□□ 1.1
TSPAN4-209ENST00000409543 ATP2B1P20020 1258 aa21.92■■□□□ 1.1
TSPAN4-209ENST00000409543 SFPQP23246 707 aaKnown RBP eCLIP21.92■■□□□ 1.12e-6■■■■□ 23.9
TSPAN4-209ENST00000409543 ECHDC2Q86YB7 292 aa21.92■■□□□ 1.1
TSPAN4-209ENST00000409543 KSR1Q8IVT5 923 aa21.92■■□□□ 1.1
TSPAN4-209ENST00000409543 UHRF1Q96T88 793 aaPredicted RBP21.92■■□□□ 1.1
TSPAN4-209ENST00000409543 UPF2Q9HAU5 1272 aaKnown RBP21.92■■□□□ 1.1
TSPAN4-209ENST00000409543 ALG13Q9NP73 1137 aaKnown RBP21.92■■□□□ 1.1
TSPAN4-209ENST00000409543 DACT1Q9NYF0 836 aa21.92■■□□□ 1.1
TSPAN4-209ENST00000409543 TNFRSF10AO00220 468 aa21.91■■□□□ 1.1
TSPAN4-209ENST00000409543 ZBTB39O15060 712 aa21.91■■□□□ 1.1
TSPAN4-209ENST00000409543 GAS2O43903 313 aaKnown RBP21.91■■□□□ 1.1
TSPAN4-209ENST00000409543 ST18O60284 1047 aa21.91■■□□□ 1.1
TSPAN4-209ENST00000409543 ITGB1P05556 798 aa21.91■■□□□ 1.1
TSPAN4-209ENST00000409543 MCM7P33993 719 aa21.91■■□□□ 1.1
TSPAN4-209ENST00000409543 ORC2Q13416 577 aaPredicted RBP21.91■■□□□ 1.1
TSPAN4-209ENST00000409543 XKR9Q5GH70 373 aa21.91■■□□□ 1.1
TSPAN4-209ENST00000409543 KLHL23Q8NBE8 558 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms