RNA–Protein interactions for RNA: ENST00000409252.6

SH3D19-202, Transcript of SH3 domain containing 19, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SH3D19, Length 4,888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-202ENST00000409252 LIN9Q5TKA1 542 aa9.19□□□□□ -0.94
SH3D19-202ENST00000409252 FAM117BQ6P1L5 589 aa9.19□□□□□ -0.94
SH3D19-202ENST00000409252 CCDC117Q8IWD4 279 aaPredicted RBP9.19□□□□□ -0.94
SH3D19-202ENST00000409252 IPO4Q8TEX9 1081 aaKnown RBP9.19□□□□□ -0.94
SH3D19-202ENST00000409252 TUBGCP2Q9BSJ2 902 aa9.19□□□□□ -0.94
SH3D19-202ENST00000409252 BAZ2BQ9UIF8 2168 aaKnown RBP9.19□□□□□ -0.94
SH3D19-202ENST00000409252 IRS2Q9Y4H2 1338 aa9.19□□□□□ -0.94
SH3D19-202ENST00000409252 GAS2O43903 313 aaKnown RBP9.19□□□□□ -0.94
SH3D19-202ENST00000409252 MED24O75448 989 aa9.19□□□□□ -0.94
SH3D19-202ENST00000409252 SFMBT2Q5VUG0 894 aa9.19□□□□□ -0.94
SH3D19-202ENST00000409252 RRAGAQ7L523 313 aa9.19□□□□□ -0.94
SH3D19-202ENST00000409252 EHBP1Q8NDI1 1231 aa9.19□□□□□ -0.94
SH3D19-202ENST00000409252 DEFB118Q96PH6 123 aa9.19□□□□□ -0.94
SH3D19-202ENST00000409252 CCDC85CA6NKD9 419 aa9.19□□□□□ -0.94
SH3D19-202ENST00000409252 GPR25O00155 361 aa9.19□□□□□ -0.94
SH3D19-202ENST00000409252 PSEN2P49810 448 aa9.19□□□□□ -0.94
SH3D19-202ENST00000409252 HTRA3P83110 453 aa9.19□□□□□ -0.94
SH3D19-202ENST00000409252 KLHL30Q0D2K2 578 aa9.19□□□□□ -0.94
SH3D19-202ENST00000409252 KNOP1Q1ED39 458 aaKnown RBP9.19□□□□□ -0.94
SH3D19-202ENST00000409252 IL31RAQ8NI17 732 aa9.19□□□□□ -0.94
SH3D19-202ENST00000409252 SENP6Q9GZR1 1112 aaPredicted RBP9.19□□□□□ -0.94
SH3D19-202ENST00000409252 TYW1Q9NV66 732 aaKnown RBP9.19□□□□□ -0.94
SH3D19-202ENST00000409252 SETD4Q9NVD3 440 aa9.19□□□□□ -0.94
SH3D19-202ENST00000409252 RBPJLQ9UBG7 517 aa9.19□□□□□ -0.94
SH3D19-202ENST00000409252 GOLGA6L9A6NEM1 432 aa9.19□□□□□ -0.94
SH3D19-202ENST00000409252 CYP3A4P08684 503 aa9.19□□□□□ -0.94
SH3D19-202ENST00000409252 SKILP12757 684 aa9.19□□□□□ -0.94
SH3D19-202ENST00000409252 EEF1GP26641 437 aaKnown RBP9.19□□□□□ -0.94
SH3D19-202ENST00000409252 TOB1P50616 345 aaPredicted RBP9.19□□□□□ -0.94
SH3D19-202ENST00000409252 GPC3P51654 580 aa9.19□□□□□ -0.94
SH3D19-202ENST00000409252 COL9A3Q14050 684 aaPredicted RBP9.19□□□□□ -0.94
SH3D19-202ENST00000409252 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.19□□□□□ -0.94
SH3D19-202ENST00000409252 USP49Q70CQ1 688 aa9.19□□□□□ -0.94
SH3D19-202ENST00000409252 KCTD17Q8N5Z5 321 aa9.19□□□□□ -0.94
SH3D19-202ENST00000409252 BEST2Q8NFU1 509 aa9.19□□□□□ -0.94
SH3D19-202ENST00000409252 ATP8B4Q8TF62 1192 aa9.19□□□□□ -0.94
SH3D19-202ENST00000409252 SAAL1Q96ER3 474 aa9.19□□□□□ -0.94
SH3D19-202ENST00000409252 TRIM9Q9C026 710 aa9.19□□□□□ -0.94
SH3D19-202ENST00000409252 SBF2Q86WG5 1849 aa9.18□□□□□ -0.94
SH3D19-202ENST00000409252 PPFIA4O75335 1185 aa9.18□□□□□ -0.94
SH3D19-202ENST00000409252 ABL1P00519 1130 aa9.18□□□□□ -0.94
SH3D19-202ENST00000409252 KLRC1P26715 233 aa9.18□□□□□ -0.94
SH3D19-202ENST00000409252 CIITAP33076 1130 aa9.18□□□□□ -0.94
SH3D19-202ENST00000409252 COPB1P53618 953 aaKnown RBP9.18□□□□□ -0.94
SH3D19-202ENST00000409252 PTPN14Q15678 1187 aa9.18□□□□□ -0.94
SH3D19-202ENST00000409252 GRIK4Q16099 956 aa9.18□□□□□ -0.94
SH3D19-202ENST00000409252 MAN2A1Q16706 1144 aa9.18□□□□□ -0.94
SH3D19-202ENST00000409252 EARS2Q5JPH6 523 aaKnown RBP9.18□□□□□ -0.94
SH3D19-202ENST00000409252 SCARA5Q6ZMJ2 495 aa9.18□□□□□ -0.94
SH3D19-202ENST00000409252 C11orf57Q6ZUT1 292 aaPredicted RBP9.18□□□□□ -0.94
SH3D19-202ENST00000409252 INTS8Q75QN2 995 aaKnown RBP9.18□□□□□ -0.94
SH3D19-202ENST00000409252 SLC5A5Q92911 643 aa9.18□□□□□ -0.94
SH3D19-202ENST00000409252 PGBD4Q96DM1 585 aa9.18□□□□□ -0.94
SH3D19-202ENST00000409252 ZBED3Q96IU2 234 aaPredicted RBP9.18□□□□□ -0.94
SH3D19-202ENST00000409252 TAF1P21675 1872 aa9.18□□□□□ -0.94
SH3D19-202ENST00000409252 CACNA1SQ13698 1873 aa9.18□□□□□ -0.94
SH3D19-202ENST00000409252 FOXN1O15353 648 aa9.18□□□□□ -0.94
SH3D19-202ENST00000409252 LGALS2P05162 132 aa9.18□□□□□ -0.94
SH3D19-202ENST00000409252 STAT1P42224 750 aa9.18□□□□□ -0.94
SH3D19-202ENST00000409252 PRMT2P55345 433 aa9.18□□□□□ -0.94
SH3D19-202ENST00000409252 GRIN1Q05586 938 aa9.18□□□□□ -0.94
SH3D19-202ENST00000409252 KIF5AQ12840 1032 aa9.18□□□□□ -0.94
SH3D19-202ENST00000409252 NAALADL2Q58DX5 795 aa9.18□□□□□ -0.94
SH3D19-202ENST00000409252 CELF3Q5SZQ8 465 aaKnown RBP9.18□□□□□ -0.94
SH3D19-202ENST00000409252 CXCL17Q6UXB2 119 aa9.18□□□□□ -0.94
SH3D19-202ENST00000409252 AGO2Q9UKV8 859 aaKnown RBP9.18□□□□□ -0.94
SH3D19-202ENST00000409252 PCDHB4Q9Y5E5 795 aa9.18□□□□□ -0.94
SH3D19-202ENST00000409252 PPP1R11O60927 126 aaPredicted RBP9.18□□□□□ -0.94
SH3D19-202ENST00000409252 CABYRO75952 493 aa9.18□□□□□ -0.94
SH3D19-202ENST00000409252 INSRRP14616 1297 aa9.18□□□□□ -0.94
SH3D19-202ENST00000409252 CASQ1P31415 396 aa9.18□□□□□ -0.94
SH3D19-202ENST00000409252 PDE6CP51160 858 aa9.18□□□□□ -0.94
SH3D19-202ENST00000409252 HSD17B4P51659 736 aa9.18□□□□□ -0.94
SH3D19-202ENST00000409252 MFAP3P55082 362 aa9.18□□□□□ -0.94
SH3D19-202ENST00000409252 POLR2FP61218 127 aaKnown RBP9.18□□□□□ -0.94
SH3D19-202ENST00000409252 GOLGA6L1Q8N7Z2 621 aa9.18□□□□□ -0.94
SH3D19-202ENST00000409252 IQCDQ96DY2 449 aa9.18□□□□□ -0.94
SH3D19-202ENST00000409252 PPP1R12CQ9BZL4 782 aa9.18□□□□□ -0.94
SH3D19-202ENST00000409252 XPO4Q9C0E2 1151 aaKnown RBP9.18□□□□□ -0.94
SH3D19-202ENST00000409252 MYMKA6NI61 221 aa9.17□□□□□ -0.94
SH3D19-202ENST00000409252 CAPN15O75808 1086 aa9.17□□□□□ -0.94
SH3D19-202ENST00000409252 RPLP2P05387 115 aaKnown RBP9.17□□□□□ -0.94
SH3D19-202ENST00000409252 CYP11B2P19099 503 aa9.17□□□□□ -0.94
SH3D19-202ENST00000409252 CTCFP49711 727 aaPredicted RBP9.17□□□□□ -0.94
SH3D19-202ENST00000409252 KIAA1755Q5JYT7 1200 aa9.17□□□□□ -0.94
SH3D19-202ENST00000409252 PLCD3Q8N3E9 789 aa9.17□□□□□ -0.94
SH3D19-202ENST00000409252 PLVAPQ9BX97 442 aa9.17□□□□□ -0.94
SH3D19-202ENST00000409252 NUCKS1Q9H1E3 243 aaKnown RBP9.17□□□□□ -0.94
SH3D19-202ENST00000409252 TMEM39AQ9NV64 488 aa9.17□□□□□ -0.94
SH3D19-202ENST00000409252 PRMT7Q9NVM4 692 aaPredicted RBP9.17□□□□□ -0.94
SH3D19-202ENST00000409252 FAM170AA1A519 330 aa9.17□□□□□ -0.94
SH3D19-202ENST00000409252 VTNP04004 478 aa9.17□□□□□ -0.94
SH3D19-202ENST00000409252 CCDC175P0C221 793 aa9.17□□□□□ -0.94
SH3D19-202ENST00000409252 RFX1P22670 979 aa9.17□□□□□ -0.94
SH3D19-202ENST00000409252 VEGFBP49765 207 aa9.17□□□□□ -0.94
SH3D19-202ENST00000409252 ZNF75DP51815 510 aa9.17□□□□□ -0.94
SH3D19-202ENST00000409252 KYAT1Q16773 422 aa9.17□□□□□ -0.94
SH3D19-202ENST00000409252 GJC2Q5T442 439 aaPredicted RBP9.17□□□□□ -0.94
SH3D19-202ENST00000409252 LDLRAD1Q5T700 205 aa9.17□□□□□ -0.94
SH3D19-202ENST00000409252 C4orf19Q8IY42 314 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms