RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 TYW1Q9NV66 732 aaKnown RBP4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 ARMCX3Q9UH62 379 aaPredicted RBP4.38□□□□□ -1.71
LRRTM4-201ENST00000409088 POLR2AP24928 1970 aaKnown RBP4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 FRMPD4Q14CM0 1322 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 TGFB1I1O43294 461 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 HIP1RO75146 1068 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 AKAP3O75969 853 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 IPO7O95373 1038 aaKnown RBP4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 CCNE2O96020 404 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 RPL13P26373 211 aaKnown RBP4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 CYLC1P35663 651 aaPredicted RBP4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 APBA1Q02410 837 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 MEA1Q16626 185 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 UGCGQ16739 394 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 DCAF17Q5H9S7 520 aaPredicted RBP4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 ZNF720Q7Z2F6 126 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 ANKRD35Q8N283 1001 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 CLMNQ96JQ2 1002 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 CCDC42Q96M95 316 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 LSM14BQ9BX40 385 aaKnown RBP4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 L2HGDHQ9H9P8 463 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 CYP39A1Q9NYL5 469 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 ODF2LQ9ULJ1 636 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 GUCA1BQ9UMX6 200 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 TFR2Q9UP52 801 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 ASTN1O14525 1302 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 A0A1W2PQJ5 194 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 LRRC53A6NM62 1247 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 WDR64B1ANS9 1081 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 PLEKP08567 350 aaPredicted RBP4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 GUCY2CP25092 1073 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 YWHABP31946 246 aaKnown RBP4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 SOX11P35716 441 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 IREB2P48200 963 aaKnown RBP4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 RARRES1P49788 294 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 NPEPPSP55786 919 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 MARSP56192 900 aaKnown RBP4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 POLR2FP61218 127 aaKnown RBP4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 KRT76Q01546 638 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 CYP27A1Q02318 531 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 BMT2Q1RMZ1 405 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 EAPPQ56P03 285 aaPredicted RBP4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 XKR9Q5GH70 373 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 PLA2G4FQ68DD2 849 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 FRMD5Q7Z6J6 570 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 KIAA1328Q86T90 577 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 SYCP3Q8IZU3 236 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 DAW1Q8N136 415 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 SLC35F6Q8N357 371 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 LRRN4CLQ8ND94 238 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 FIZ1Q96SL8 496 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 PAGR1Q9BTK6 254 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 DEF6Q9H4E7 631 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 KCND2Q9NZV8 630 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 LARSQ9P2J5 1176 aaKnown RBP4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 SEL1LQ9UBV2 794 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 TRIM10Q9UDY6 481 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 FAM184BQ9ULE4 1060 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 PLAGL2Q9UPG8 496 aa4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 REXO2Q9Y3B8 237 aaKnown RBP4.37□□□□□ -1.71
LRRTM4-201ENST00000409088 ATP2A1O14983 1001 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 EIF3DO15371 548 aaKnown RBP eCLIP4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 LZTS3O60299 673 aaPredicted RBP4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 EPB41P11171 864 aaKnown RBP4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 XRCC5P13010 732 aaKnown RBP4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 NF2P35240 595 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 ARHGAP25P42331 645 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 CYP2J2P51589 502 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 JAK3P52333 1124 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 ZNF131P52739 623 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 PSMC5P62195 406 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 CNTN2Q02246 1040 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 NCBP1Q09161 790 aaKnown RBP4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 MAPK7Q13164 816 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 ENOX2Q16206 610 aaKnown RBP4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 CCDC122Q5T0U0 273 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 XRRA1Q6P2D8 792 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 STXBP4Q6ZWJ1 553 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 HS2ST1Q7LGA3 356 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 NCAPG2Q86XI2 1143 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 ZC3H3Q8IXZ2 948 aaKnown RBP4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 RDH13Q8NBN7 331 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 MNS1Q8NEH6 495 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 GPRASP2Q96D09 838 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 IQCDQ96DY2 449 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 ERO1AQ96HE7 468 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 INPP4AQ96PE3 977 aaPredicted RBP4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 CARD6Q9BX69 1037 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 GBP3Q9H0R5 595 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 GPRC5CQ9NQ84 441 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 BTBD7Q9P203 1132 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 GABBR1Q9UBS5 961 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 PNMA3Q9UL41 463 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 TELO2Q9Y4R8 837 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 DOCK1Q14185 1865 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 K7ENM7 598 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 BACH1O14867 736 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 MAFGO15525 162 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 AKR1B10O60218 316 aa4.36□□□□□ -1.71
LRRTM4-201ENST00000409088 NOL4O94818 638 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms