RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 SMAP1Q8IYB5 467 aaPredicted RBP13.93□□□□□ -0.18
APOBEC3B-204ENST00000407298 FAM167AQ96KS9 214 aa13.93□□□□□ -0.18
APOBEC3B-204ENST00000407298 MRPL9Q9BYD2 267 aaKnown RBP13.93□□□□□ -0.18
APOBEC3B-204ENST00000407298 MFSD1Q9H3U5 465 aa13.93□□□□□ -0.18
APOBEC3B-204ENST00000407298 DZANK1Q9NVP4 752 aa13.93□□□□□ -0.18
APOBEC3B-204ENST00000407298 AKT3Q9Y243 479 aa13.93□□□□□ -0.18
APOBEC3B-204ENST00000407298 MAFBQ9Y5Q3 323 aaPredicted RBP13.93□□□□□ -0.18
APOBEC3B-204ENST00000407298 EVPLQ92817 2033 aa13.92□□□□□ -0.18
APOBEC3B-204ENST00000407298 FAM186AA6NE01 2351 aa13.92□□□□□ -0.18
APOBEC3B-204ENST00000407298 C2orf71A6NGG8 1288 aa13.92□□□□□ -0.18
APOBEC3B-204ENST00000407298 C2CD4DB7Z1M9 353 aa13.92□□□□□ -0.18
APOBEC3B-204ENST00000407298 CXCL14O95715 111 aa13.92□□□□□ -0.18
APOBEC3B-204ENST00000407298 PDGFBP01127 241 aaPredicted RBP13.92□□□□□ -0.18
APOBEC3B-204ENST00000407298 VTNP04004 478 aa13.92□□□□□ -0.18
APOBEC3B-204ENST00000407298 EIF4BP23588 611 aaKnown RBP13.92□□□□□ -0.18
APOBEC3B-204ENST00000407298 CA8P35219 290 aa13.92□□□□□ -0.18
APOBEC3B-204ENST00000407298 CLCN5P51795 746 aa13.92□□□□□ -0.18
APOBEC3B-204ENST00000407298 ATAT1Q5SQI0 421 aa13.92□□□□□ -0.18
APOBEC3B-204ENST00000407298 LRRC55Q6ZSA7 311 aa13.92□□□□□ -0.18
APOBEC3B-204ENST00000407298 ECHDC2Q86YB7 292 aa13.92□□□□□ -0.18
APOBEC3B-204ENST00000407298 ZDHHC14Q8IZN3 488 aa13.92□□□□□ -0.18
APOBEC3B-204ENST00000407298 TDRD5Q8NAT2 981 aaKnown RBP13.92□□□□□ -0.18
APOBEC3B-204ENST00000407298 PPP1R16BQ96T49 567 aa13.92□□□□□ -0.18
APOBEC3B-204ENST00000407298 ZNF577Q9BSK1 485 aa13.92□□□□□ -0.18
APOBEC3B-204ENST00000407298 POMKQ9H5K3 350 aa13.92□□□□□ -0.18
APOBEC3B-204ENST00000407298 BARHL2Q9NY43 387 aa13.92□□□□□ -0.18
APOBEC3B-204ENST00000407298 DACT1Q9NYF0 836 aa13.92□□□□□ -0.18
APOBEC3B-204ENST00000407298 HCSTQ9UBK5 93 aa13.92□□□□□ -0.18
APOBEC3B-204ENST00000407298 USTQ9Y2C2 406 aa13.92□□□□□ -0.18
APOBEC3B-204ENST00000407298 PCDHA10Q9Y5I2 948 aa13.92□□□□□ -0.18
APOBEC3B-204ENST00000407298 HCFC2Q9Y5Z7 792 aa13.92□□□□□ -0.18
APOBEC3B-204ENST00000407298 MYO10Q9HD67 2058 aa13.91□□□□□ -0.18
APOBEC3B-204ENST00000407298 BRD1O95696 1058 aa13.91□□□□□ -0.18
APOBEC3B-204ENST00000407298 CYP3A4P08684 503 aa13.91□□□□□ -0.18
APOBEC3B-204ENST00000407298 ATXN8OSP0DMR3 200 aa13.91□□□□□ -0.18
APOBEC3B-204ENST00000407298 NLRP11P59045 1033 aaKnown RBP13.91□□□□□ -0.18
APOBEC3B-204ENST00000407298 CDC42EP1Q00587 391 aa13.91□□□□□ -0.18
APOBEC3B-204ENST00000407298 SETQ01105 290 aaPredicted RBP13.91□□□□□ -0.18
APOBEC3B-204ENST00000407298 EFCAB12Q6NXP0 572 aa13.91□□□□□ -0.18
APOBEC3B-204ENST00000407298 RAB11FIP4Q86YS3 637 aa13.91□□□□□ -0.18
APOBEC3B-204ENST00000407298 SLC39A11Q8N1S5 342 aa13.91□□□□□ -0.18
APOBEC3B-204ENST00000407298 RNF169Q8NCN4 708 aa13.91□□□□□ -0.18
APOBEC3B-204ENST00000407298 TMEM169Q96HH4 297 aa13.91□□□□□ -0.18
APOBEC3B-204ENST00000407298 PGBD1Q96JS3 809 aa13.91□□□□□ -0.18
APOBEC3B-204ENST00000407298 NRBP2Q9NSY0 501 aa13.91□□□□□ -0.18
APOBEC3B-204ENST00000407298 STK39Q9UEW8 545 aa13.91□□□□□ -0.18
APOBEC3B-204ENST00000407298 V9GY48 417 aaPredicted RBP13.91□□□□□ -0.18
APOBEC3B-204ENST00000407298 A0A0U1RQF3 1178 aa13.9□□□□□ -0.18
APOBEC3B-204ENST00000407298 PRR23AA6NEV1 266 aa13.9□□□□□ -0.18
APOBEC3B-204ENST00000407298 SLC27A2O14975 620 aa13.9□□□□□ -0.18
APOBEC3B-204ENST00000407298 DHX15O43143 795 aaKnown RBP13.9□□□□□ -0.18
APOBEC3B-204ENST00000407298 CLASP2O75122 1294 aaKnown RBP13.9□□□□□ -0.18
APOBEC3B-204ENST00000407298 ATP4AP20648 1035 aa13.9□□□□□ -0.18
APOBEC3B-204ENST00000407298 CLK2P49760 499 aaKnown RBP13.9□□□□□ -0.18
APOBEC3B-204ENST00000407298 POLGP54098 1239 aaPredicted RBP13.9□□□□□ -0.18
APOBEC3B-204ENST00000407298 RTN1Q16799 776 aa13.9□□□□□ -0.18
APOBEC3B-204ENST00000407298 BMP2KLQ5H9B9 411 aa13.9□□□□□ -0.18
APOBEC3B-204ENST00000407298 KIAA1841Q6NSI8 718 aa13.9□□□□□ -0.18
APOBEC3B-204ENST00000407298 SCLT1Q96NL6 688 aa13.9□□□□□ -0.18
APOBEC3B-204ENST00000407298 ADAMTS10Q9H324 1103 aa13.9□□□□□ -0.18
APOBEC3B-204ENST00000407298 RNF19AQ9NV58 838 aa13.9□□□□□ -0.18
APOBEC3B-204ENST00000407298 DBR1Q9UK59 544 aaKnown RBP13.9□□□□□ -0.18
APOBEC3B-204ENST00000407298 SAMM50Q9Y512 469 aa13.9□□□□□ -0.18
APOBEC3B-204ENST00000407298 CNTNAP5Q8WYK1 1306 aa13.9□□□□□ -0.19
APOBEC3B-204ENST00000407298 FAM86B1E9PN63 330 aa13.89□□□□□ -0.19
APOBEC3B-204ENST00000407298 ZBTB43O43298 467 aa13.89□□□□□ -0.19
APOBEC3B-204ENST00000407298 FAM86B2P0C5J1 330 aa13.89□□□□□ -0.19
APOBEC3B-204ENST00000407298 SKIP12755 728 aa13.89□□□□□ -0.19
APOBEC3B-204ENST00000407298 PBX3P40426 434 aa13.89□□□□□ -0.19
APOBEC3B-204ENST00000407298 CLCN3P51790 818 aa13.89□□□□□ -0.19
APOBEC3B-204ENST00000407298 BCAR1P56945 870 aa13.89□□□□□ -0.19
APOBEC3B-204ENST00000407298 RARS2Q5T160 578 aaKnown RBP13.89□□□□□ -0.19
APOBEC3B-204ENST00000407298 RNF20Q5VTR2 975 aa13.89□□□□□ -0.19
APOBEC3B-204ENST00000407298 CREB3L3Q68CJ9 461 aa13.89□□□□□ -0.19
APOBEC3B-204ENST00000407298 TYW1BQ6NUM6 668 aa13.89□□□□□ -0.19
APOBEC3B-204ENST00000407298 APOA5Q6Q788 366 aa13.89□□□□□ -0.19
APOBEC3B-204ENST00000407298 ASCL5Q7RTU5 278 aa13.89□□□□□ -0.19
APOBEC3B-204ENST00000407298 ERMP1Q7Z2K6 904 aa13.89□□□□□ -0.19
APOBEC3B-204ENST00000407298 TRMT1LQ7Z2T5 733 aaKnown RBP13.89□□□□□ -0.19
APOBEC3B-204ENST00000407298 PPFIBP1Q86W92 1011 aa13.89□□□□□ -0.19
APOBEC3B-204ENST00000407298 TMEM105Q8N8V8 129 aa13.89□□□□□ -0.19
APOBEC3B-204ENST00000407298 CCDC12Q8WUD4 166 aaPredicted RBP13.89□□□□□ -0.19
APOBEC3B-204ENST00000407298 NKD2Q969F2 451 aaPredicted RBP13.89□□□□□ -0.19
APOBEC3B-204ENST00000407298 ACSF2Q96CM8 615 aaPredicted RBP13.89□□□□□ -0.19
APOBEC3B-204ENST00000407298 LRRC2Q9BYS8 371 aa13.89□□□□□ -0.19
APOBEC3B-204ENST00000407298 LSG1Q9H089 658 aaKnown RBP13.89□□□□□ -0.19
APOBEC3B-204ENST00000407298 CYP26B1Q9NR63 512 aa13.89□□□□□ -0.19
APOBEC3B-204ENST00000407298 CHST12Q9NRB3 414 aa13.89□□□□□ -0.19
APOBEC3B-204ENST00000407298 GABBR1Q9UBS5 961 aa13.89□□□□□ -0.19
APOBEC3B-204ENST00000407298 LIMD1Q9UGP4 676 aa13.89□□□□□ -0.19
APOBEC3B-204ENST00000407298 VPS13AQ96RL7 3174 aa13.89□□□□□ -0.19
APOBEC3B-204ENST00000407298 MYH9P35579 1960 aaKnown RBP13.89□□□□□ -0.19
APOBEC3B-204ENST00000407298 IGLV3-22A0A075B6J6 115 aa13.88□□□□□ -0.19
APOBEC3B-204ENST00000407298 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.88□□□□□ -0.19
APOBEC3B-204ENST00000407298 DARSP14868 501 aaKnown RBP13.88□□□□□ -0.19
APOBEC3B-204ENST00000407298 METAP2P50579 478 aaKnown RBP eCLIP13.88□□□□□ -0.19
APOBEC3B-204ENST00000407298 COL9A3Q14050 684 aaPredicted RBP13.88□□□□□ -0.19
APOBEC3B-204ENST00000407298 NECTIN1Q15223 517 aa13.88□□□□□ -0.19
APOBEC3B-204ENST00000407298 CLLU1OSQ5K130 101 aa13.88□□□□□ -0.19
APOBEC3B-204ENST00000407298 JAKMIP3Q5VZ66 844 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms