RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 USP38Q8NB14 1042 aa16.24■□□□□ 0.19
CDPF1-203ENST00000404583 LINC00301Q8NCQ3 95 aa16.24■□□□□ 0.19
CDPF1-203ENST00000404583 PNMA5Q96PV4 448 aa16.24■□□□□ 0.19
CDPF1-203ENST00000404583 CSRNP2Q9H175 543 aa16.24■□□□□ 0.19
CDPF1-203ENST00000404583 PADI3Q9ULW8 664 aa16.24■□□□□ 0.19
CDPF1-203ENST00000404583 NOC2LQ9Y3T9 749 aaKnown RBP16.24■□□□□ 0.19
CDPF1-203ENST00000404583 SQORQ9Y6N5 450 aa16.24■□□□□ 0.19
CDPF1-203ENST00000404583 GBF1Q92538 1859 aa16.24■□□□□ 0.19
CDPF1-203ENST00000404583 TCHHQ07283 1943 aa16.23■□□□□ 0.19
CDPF1-203ENST00000404583 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.23■□□□□ 0.19
CDPF1-203ENST00000404583 ABHD14A-ACY1A0A1B0GW23 586 aa16.23■□□□□ 0.19
CDPF1-203ENST00000404583 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.23■□□□□ 0.19
CDPF1-203ENST00000404583 GAS2O43903 313 aaKnown RBP16.23■□□□□ 0.19
CDPF1-203ENST00000404583 RPS6KA5O75582 802 aa16.23■□□□□ 0.19
CDPF1-203ENST00000404583 UBA7P41226 1012 aa16.23■□□□□ 0.19
CDPF1-203ENST00000404583 WDR5P61964 334 aaKnown RBP16.23■□□□□ 0.19
CDPF1-203ENST00000404583 GRB10Q13322 594 aa16.23■□□□□ 0.19
CDPF1-203ENST00000404583 HYIQ5T013 277 aa16.23■□□□□ 0.19
CDPF1-203ENST00000404583 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.23■□□□□ 0.19
CDPF1-203ENST00000404583 MAEAQ7L5Y9 396 aa16.23■□□□□ 0.19
CDPF1-203ENST00000404583 KCNK18Q7Z418 384 aa16.23■□□□□ 0.19
CDPF1-203ENST00000404583 TCP11Q8WWU5 503 aa16.23■□□□□ 0.19
CDPF1-203ENST00000404583 PRPF31Q8WWY3 499 aaKnown RBP16.23■□□□□ 0.19
CDPF1-203ENST00000404583 NLRP7Q8WX94 980 aa16.23■□□□□ 0.19
CDPF1-203ENST00000404583 APBB2Q92870 758 aa16.23■□□□□ 0.19
CDPF1-203ENST00000404583 SCLT1Q96NL6 688 aa16.23■□□□□ 0.19
CDPF1-203ENST00000404583 BHMT2Q9H2M3 363 aa16.23■□□□□ 0.19
CDPF1-203ENST00000404583 ATP6V0A4Q9HBG4 840 aa16.23■□□□□ 0.19
CDPF1-203ENST00000404583 DNM3Q9UQ16 869 aa16.23■□□□□ 0.19
CDPF1-203ENST00000404583 A0A087WZ62 844 aa16.22■□□□□ 0.19
CDPF1-203ENST00000404583 ARHGEF35A5YM69 484 aa16.22■□□□□ 0.19
CDPF1-203ENST00000404583 KCNJ6P48051 423 aa16.22■□□□□ 0.19
CDPF1-203ENST00000404583 DEFB103AP81534 67 aa16.22■□□□□ 0.19
CDPF1-203ENST00000404583 DNM1Q05193 864 aaKnown RBP16.22■□□□□ 0.19
CDPF1-203ENST00000404583 NFX1Q12986 1120 aaKnown RBP16.22■□□□□ 0.19
CDPF1-203ENST00000404583 PAK2Q13177 524 aa16.22■□□□□ 0.19
CDPF1-203ENST00000404583 PADI6Q6TGC4 694 aa16.22■□□□□ 0.19
CDPF1-203ENST00000404583 ZNF710Q8N1W2 664 aa16.22■□□□□ 0.19
CDPF1-203ENST00000404583 PSPC1Q8WXF1 523 aaKnown RBP16.22■□□□□ 0.19
CDPF1-203ENST00000404583 CDK5RAP3Q96JB5 506 aa16.22■□□□□ 0.19
CDPF1-203ENST00000404583 NLRP4Q96MN2 994 aa16.22■□□□□ 0.19
CDPF1-203ENST00000404583 FAM161BQ96MY7 647 aa16.22■□□□□ 0.19
CDPF1-203ENST00000404583 FDXACB1Q9BRP7 624 aaPredicted RBP16.22■□□□□ 0.19
CDPF1-203ENST00000404583 ST3GAL5Q9UNP4 418 aa16.22■□□□□ 0.19
CDPF1-203ENST00000404583 COL4A3BPQ9Y5P4 624 aa16.22■□□□□ 0.19
CDPF1-203ENST00000404583 MORC2Q9Y6X9 1032 aaPredicted RBP16.22■□□□□ 0.19
CDPF1-203ENST00000404583 CDH23Q9H251 3354 aa16.22■□□□□ 0.19
CDPF1-203ENST00000404583 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.21■□□□□ 0.19
CDPF1-203ENST00000404583 SPTLC2O15270 562 aa16.21■□□□□ 0.19
CDPF1-203ENST00000404583 EFCAB14O75071 495 aa16.21■□□□□ 0.19
CDPF1-203ENST00000404583 CSDE1O75534 798 aaKnown RBP16.21■□□□□ 0.19
CDPF1-203ENST00000404583 EYA4O95677 639 aa16.21■□□□□ 0.19
CDPF1-203ENST00000404583 SRGAP2CP0DJJ0 459 aa16.21■□□□□ 0.19
CDPF1-203ENST00000404583 ATP2A2P16615 1042 aaKnown RBP16.21■□□□□ 0.19
CDPF1-203ENST00000404583 EIF4BP23588 611 aaKnown RBP16.21■□□□□ 0.19
CDPF1-203ENST00000404583 CDC42EP1Q00587 391 aa16.21■□□□□ 0.19
CDPF1-203ENST00000404583 LAMTOR4Q0VGL1 99 aa16.21■□□□□ 0.19
CDPF1-203ENST00000404583 USP49Q70CQ1 688 aa16.21■□□□□ 0.19
CDPF1-203ENST00000404583 TMCO2Q7Z6W1 182 aaPredicted RBP16.21■□□□□ 0.19
CDPF1-203ENST00000404583 FAM228AQ86W67 206 aa16.21■□□□□ 0.19
CDPF1-203ENST00000404583 KRI1Q8N9T8 703 aaKnown RBP16.21■□□□□ 0.19
CDPF1-203ENST00000404583 EPSTI1Q96J88 318 aa16.21■□□□□ 0.19
CDPF1-203ENST00000404583 NT5C3AQ9H0P0 336 aa16.21■□□□□ 0.19
CDPF1-203ENST00000404583 ERVK-5Q9HDB9 667 aa16.21■□□□□ 0.19
CDPF1-203ENST00000404583 GPRC5CQ9NQ84 441 aa16.21■□□□□ 0.19
CDPF1-203ENST00000404583 EYSQ5T1H1 3165 aa16.21■□□□□ 0.19
CDPF1-203ENST00000404583 GPR182O15218 404 aa16.2■□□□□ 0.18
CDPF1-203ENST00000404583 ASAP2O43150 1006 aa16.2■□□□□ 0.18
CDPF1-203ENST00000404583 YEATS4O95619 227 aa16.2■□□□□ 0.18
CDPF1-203ENST00000404583 DARSP14868 501 aaKnown RBP16.2■□□□□ 0.18
CDPF1-203ENST00000404583 CYP11B2P19099 503 aa16.2■□□□□ 0.18
CDPF1-203ENST00000404583 FGFR4P22455 802 aa16.2■□□□□ 0.18
CDPF1-203ENST00000404583 ARL2P36404 184 aa16.2■□□□□ 0.18
CDPF1-203ENST00000404583 RABGGTBP53611 331 aa16.2■□□□□ 0.18
CDPF1-203ENST00000404583 SMAD3P84022 425 aaKnown RBP16.2■□□□□ 0.18
CDPF1-203ENST00000404583 KARSQ15046 597 aaKnown RBP16.2■□□□□ 0.18
CDPF1-203ENST00000404583 TMEM119Q4V9L6 283 aa16.2■□□□□ 0.18
CDPF1-203ENST00000404583 RTN4RL1Q86UN2 441 aaPredicted RBP16.2■□□□□ 0.18
CDPF1-203ENST00000404583 ZNF410Q86VK4 478 aa16.2■□□□□ 0.18
CDPF1-203ENST00000404583 PHOSPHO2Q8TCD6 241 aa16.2■□□□□ 0.18
CDPF1-203ENST00000404583 ASAP3Q8TDY4 903 aa16.2■□□□□ 0.18
CDPF1-203ENST00000404583 CALML4Q96GE6 196 aa16.2■□□□□ 0.18
CDPF1-203ENST00000404583 CHAMP1Q96JM3 812 aa16.2■□□□□ 0.18
CDPF1-203ENST00000404583 SLC9A7Q96T83 725 aa16.2■□□□□ 0.18
CDPF1-203ENST00000404583 GCOM2Q9BZD3 368 aaPredicted RBP16.2■□□□□ 0.18
CDPF1-203ENST00000404583 TMX1Q9H3N1 280 aa16.2■□□□□ 0.18
CDPF1-203ENST00000404583 IFT122Q9HBG6 1241 aa16.2■□□□□ 0.18
CDPF1-203ENST00000404583 POLD4Q9HCU8 107 aa16.2■□□□□ 0.18
CDPF1-203ENST00000404583 MTMR10Q9NXD2 777 aa16.2■□□□□ 0.18
CDPF1-203ENST00000404583 ENPP3O14638 875 aa16.19■□□□□ 0.18
CDPF1-203ENST00000404583 PPP6R2O75170 966 aa16.19■□□□□ 0.18
CDPF1-203ENST00000404583 PBX2P40425 430 aa16.19■□□□□ 0.18
CDPF1-203ENST00000404583 FAM102BQ5T8I3 360 aa16.19■□□□□ 0.18
CDPF1-203ENST00000404583 ATL3Q6DD88 541 aa16.19■□□□□ 0.18
CDPF1-203ENST00000404583 MYOCDQ8IZQ8 938 aa16.19■□□□□ 0.18
CDPF1-203ENST00000404583 RNF149Q8NC42 400 aa16.19■□□□□ 0.18
CDPF1-203ENST00000404583 MCPH1Q8NEM0 835 aa16.19■□□□□ 0.18
CDPF1-203ENST00000404583 RASSF8Q8NHQ8 419 aa16.19■□□□□ 0.18
CDPF1-203ENST00000404583 LRRC15Q8TF66 581 aa16.19■□□□□ 0.18
CDPF1-203ENST00000404583 LINC01599Q8WXQ3 324 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms