RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 CCDC105Q8IYK2 499 aa10.36□□□□□ -0.75
SMC1B-202ENST00000404354 PROM2Q8N271 834 aa10.36□□□□□ -0.75
SMC1B-202ENST00000404354 CTNNBL1Q8WYA6 563 aaPredicted RBP10.36□□□□□ -0.75
SMC1B-202ENST00000404354 ERP44Q9BS26 406 aa10.36□□□□□ -0.75
SMC1B-202ENST00000404354 SPZ1Q9BXG8 430 aa10.36□□□□□ -0.75
SMC1B-202ENST00000404354 EDEM3Q9BZQ6 932 aa10.36□□□□□ -0.75
SMC1B-202ENST00000404354 BHMT2Q9H2M3 363 aa10.36□□□□□ -0.75
SMC1B-202ENST00000404354 EPB41L4BQ9H329 900 aa10.36□□□□□ -0.75
SMC1B-202ENST00000404354 RGL1Q9NZL6 768 aa10.36□□□□□ -0.75
SMC1B-202ENST00000404354 CTTNBP2NLQ9P2B4 639 aa10.36□□□□□ -0.75
SMC1B-202ENST00000404354 BCORQ6W2J9 1755 aa10.36□□□□□ -0.75
SMC1B-202ENST00000404354 EME2A4GXA9 379 aaPredicted RBP10.36□□□□□ -0.75
SMC1B-202ENST00000404354 H0Y3Z8 333 aa10.36□□□□□ -0.75
SMC1B-202ENST00000404354 C21orf2O43822 256 aa10.36□□□□□ -0.75
SMC1B-202ENST00000404354 KRT16P08779 473 aa10.36□□□□□ -0.75
SMC1B-202ENST00000404354 NMT1P30419 496 aaKnown RBP10.36□□□□□ -0.75
SMC1B-202ENST00000404354 STAT1P42224 750 aa10.36□□□□□ -0.75
SMC1B-202ENST00000404354 RPL21P46778 160 aaKnown RBP10.36□□□□□ -0.75
SMC1B-202ENST00000404354 DRP2Q13474 957 aa10.36□□□□□ -0.75
SMC1B-202ENST00000404354 USH1GQ495M9 461 aa10.36□□□□□ -0.75
SMC1B-202ENST00000404354 NSMFQ6X4W1 530 aa10.36□□□□□ -0.75
SMC1B-202ENST00000404354 CAPN12Q6ZSI9 719 aa10.36□□□□□ -0.75
SMC1B-202ENST00000404354 REEP2Q9BRK0 252 aa10.36□□□□□ -0.75
SMC1B-202ENST00000404354 FAM114A2Q9NRY5 505 aa10.36□□□□□ -0.75
SMC1B-202ENST00000404354 USP40Q9NVE5 1235 aa10.36□□□□□ -0.75
SMC1B-202ENST00000404354 SLAIN2Q9P270 581 aa10.36□□□□□ -0.75
SMC1B-202ENST00000404354 BCL9O00512 1426 aa10.36□□□□□ -0.75
SMC1B-202ENST00000404354 CACNA1SQ13698 1873 aa10.36□□□□□ -0.75
SMC1B-202ENST00000404354 CCDC188H7C350 402 aa10.35□□□□□ -0.75
SMC1B-202ENST00000404354 KIF1CO43896 1103 aaKnown RBP10.35□□□□□ -0.75
SMC1B-202ENST00000404354 AKR1B1P15121 316 aa10.35□□□□□ -0.75
SMC1B-202ENST00000404354 ERFP50548 548 aa10.35□□□□□ -0.75
SMC1B-202ENST00000404354 DRAP1Q14919 205 aaPredicted RBP10.35□□□□□ -0.75
SMC1B-202ENST00000404354 BARGINQ6ZT62 677 aa10.35□□□□□ -0.75
SMC1B-202ENST00000404354 HOOK3Q86VS8 718 aa10.35□□□□□ -0.75
SMC1B-202ENST00000404354 ADGRF4Q8IZF3 695 aa10.35□□□□□ -0.75
SMC1B-202ENST00000404354 CYP2W1Q8TAV3 490 aa10.35□□□□□ -0.75
SMC1B-202ENST00000404354 SYN2Q92777 582 aaPredicted RBP10.35□□□□□ -0.75
SMC1B-202ENST00000404354 PSTPIP2Q9H939 334 aa10.35□□□□□ -0.75
SMC1B-202ENST00000404354 KDM4FA0A1W2PPD8 638 aa10.35□□□□□ -0.75
SMC1B-202ENST00000404354 RASGRF2O14827 1237 aa10.35□□□□□ -0.75
SMC1B-202ENST00000404354 HOXD13P35453 343 aa10.35□□□□□ -0.75
SMC1B-202ENST00000404354 PSMD2Q13200 908 aa10.35□□□□□ -0.75
SMC1B-202ENST00000404354 KIAA1755Q5JYT7 1200 aa10.35□□□□□ -0.75
SMC1B-202ENST00000404354 SLC20A1Q8WUM9 679 aa10.35□□□□□ -0.75
SMC1B-202ENST00000404354 LMBR1Q8WVP7 490 aa10.35□□□□□ -0.75
SMC1B-202ENST00000404354 ATXN2LQ8WWM7 1075 aaKnown RBP10.35□□□□□ -0.75
SMC1B-202ENST00000404354 SH2D3AQ9BRG2 576 aa10.35□□□□□ -0.75
SMC1B-202ENST00000404354 PABPC3Q9H361 631 aaKnown RBP10.35□□□□□ -0.75
SMC1B-202ENST00000404354 KDM4CQ9H3R0 1056 aa10.35□□□□□ -0.75
SMC1B-202ENST00000404354 DNAJC12Q9UKB3 198 aa10.35□□□□□ -0.75
SMC1B-202ENST00000404354 COG5Q9UP83 839 aa10.35□□□□□ -0.75
SMC1B-202ENST00000404354 ALS2Q96Q42 1657 aa10.35□□□□□ -0.75
SMC1B-202ENST00000404354 C5orf60A6NFR6 353 aa10.35□□□□□ -0.75
SMC1B-202ENST00000404354 NR3C1P04150 777 aa10.35□□□□□ -0.75
SMC1B-202ENST00000404354 TMEM119Q4V9L6 283 aa10.35□□□□□ -0.75
SMC1B-202ENST00000404354 CCDC50Q8IVM0 306 aa10.35□□□□□ -0.75
SMC1B-202ENST00000404354 ZDHHC14Q8IZN3 488 aa10.35□□□□□ -0.75
SMC1B-202ENST00000404354 GOLGA6L10A0A0M3HER8 536 aa10.34□□□□□ -0.75
SMC1B-202ENST00000404354 CALCAP01258 141 aa10.34□□□□□ -0.75
SMC1B-202ENST00000404354 TNFAIP3P21580 790 aa10.34□□□□□ -0.75
SMC1B-202ENST00000404354 UBXN2AP68543 259 aa10.34□□□□□ -0.75
SMC1B-202ENST00000404354 IKQ13123 557 aaPredicted RBP10.34□□□□□ -0.75
SMC1B-202ENST00000404354 FAM182BQ5T319 152 aa10.34□□□□□ -0.75
SMC1B-202ENST00000404354 TTC27Q6P3X3 843 aa10.34□□□□□ -0.75
SMC1B-202ENST00000404354 PTF1AQ7RTS3 328 aa10.34□□□□□ -0.75
SMC1B-202ENST00000404354 CATSPER3Q86XQ3 398 aa10.34□□□□□ -0.75
SMC1B-202ENST00000404354 C1orf54Q8WWF1 131 aa10.34□□□□□ -0.75
SMC1B-202ENST00000404354 CEP63Q96MT8 703 aa10.34□□□□□ -0.75
SMC1B-202ENST00000404354 RUSC1Q9BVN2 902 aa10.34□□□□□ -0.75
SMC1B-202ENST00000404354 RAB17Q9H0T7 212 aa10.34□□□□□ -0.75
SMC1B-202ENST00000404354 JMJD4Q9H9V9 463 aa10.34□□□□□ -0.75
SMC1B-202ENST00000404354 ATP6V0A4Q9HBG4 840 aa10.34□□□□□ -0.75
SMC1B-202ENST00000404354 PARP4Q9UKK3 1724 aaKnown RBP10.34□□□□□ -0.75
SMC1B-202ENST00000404354 ZNF652Q9Y2D9 606 aa10.34□□□□□ -0.75
SMC1B-202ENST00000404354 CCDC169A6NNP5 214 aa10.34□□□□□ -0.75
SMC1B-202ENST00000404354 PDHA1P08559 390 aa10.34□□□□□ -0.75
SMC1B-202ENST00000404354 KNOP1Q1ED39 458 aaKnown RBP10.34□□□□□ -0.75
SMC1B-202ENST00000404354 TLDC1Q6P9B6 456 aa10.34□□□□□ -0.75
SMC1B-202ENST00000404354 PRUNE1Q86TP1 453 aa10.34□□□□□ -0.75
SMC1B-202ENST00000404354 TLCD1Q96CP7 247 aa10.34□□□□□ -0.75
SMC1B-202ENST00000404354 ZNF570Q96NI8 536 aa10.34□□□□□ -0.75
SMC1B-202ENST00000404354 SLITRK6Q9H5Y7 841 aa10.34□□□□□ -0.75
SMC1B-202ENST00000404354 PCDHA2Q9Y5H9 948 aa10.34□□□□□ -0.75
SMC1B-202ENST00000404354 ALG6Q9Y672 507 aa10.34□□□□□ -0.75
SMC1B-202ENST00000404354 TMEM120BA0PK00 339 aa10.34□□□□□ -0.75
SMC1B-202ENST00000404354 CLGNO14967 610 aa10.34□□□□□ -0.75
SMC1B-202ENST00000404354 DNAJC8O75937 253 aaPredicted RBP10.34□□□□□ -0.75
SMC1B-202ENST00000404354 HOXA13P31271 388 aaPredicted RBP10.34□□□□□ -0.75
SMC1B-202ENST00000404354 PDIA5Q14554 519 aa10.34□□□□□ -0.75
SMC1B-202ENST00000404354 LACTB2Q53H82 288 aaPredicted RBP10.34□□□□□ -0.75
SMC1B-202ENST00000404354 DAB2IPQ5VWQ8 1189 aa10.34□□□□□ -0.75
SMC1B-202ENST00000404354 ZDHHC24Q6UX98 284 aa10.34□□□□□ -0.75
SMC1B-202ENST00000404354 SLC35C1Q96A29 364 aa10.34□□□□□ -0.75
SMC1B-202ENST00000404354 ZBTB10Q96DT7 871 aa10.34□□□□□ -0.75
SMC1B-202ENST00000404354 CALR3Q96L12 384 aaKnown RBP10.34□□□□□ -0.75
SMC1B-202ENST00000404354 TMEM237Q96Q45 408 aa10.34□□□□□ -0.75
SMC1B-202ENST00000404354 DHX36Q9H2U1 1008 aaKnown RBP10.34□□□□□ -0.75
SMC1B-202ENST00000404354 PCIF1Q9H4Z3 704 aa10.34□□□□□ -0.75
SMC1B-202ENST00000404354 ZDHHC18Q9NUE0 388 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms