RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 RGL1Q9NZL6 768 aa14.92□□□□□ -0.02
SDF4-203ENST00000403997 SUCLA2Q9P2R7 463 aaPredicted RBP14.92□□□□□ -0.02
SDF4-203ENST00000403997 PCDHA12Q9UN75 941 aa14.92□□□□□ -0.02
SDF4-203ENST00000403997 COL4A4P53420 1690 aaPredicted RBP14.92□□□□□ -0.02
SDF4-203ENST00000403997 COL4A6Q14031 1691 aa14.91□□□□□ -0.02
SDF4-203ENST00000403997 IGKV6-21A0A0C4DH24 114 aa14.91□□□□□ -0.02
SDF4-203ENST00000403997 TBKBP1A7MCY6 615 aa14.91□□□□□ -0.02
SDF4-203ENST00000403997 GRM6O15303 877 aa14.91□□□□□ -0.02
SDF4-203ENST00000403997 MAFO75444 373 aaPredicted RBP14.91□□□□□ -0.02
SDF4-203ENST00000403997 BMP1P13497 986 aa14.91□□□□□ -0.02
SDF4-203ENST00000403997 ATP2B1P20020 1258 aa14.91□□□□□ -0.02
SDF4-203ENST00000403997 FGFR4P22455 802 aa14.91□□□□□ -0.02
SDF4-203ENST00000403997 KCNQ1P51787 676 aa14.91□□□□□ -0.02
SDF4-203ENST00000403997 NPEPPSP55786 919 aa14.91□□□□□ -0.02
SDF4-203ENST00000403997 FAM189BP81408 668 aa14.91□□□□□ -0.02
SDF4-203ENST00000403997 CTTNQ14247 550 aaKnown RBP14.91□□□□□ -0.02
SDF4-203ENST00000403997 DSC3Q14574 896 aa14.91□□□□□ -0.02
SDF4-203ENST00000403997 TIGD5Q53EQ6 642 aa14.91□□□□□ -0.02
SDF4-203ENST00000403997 SPOUT1Q5T280 376 aaKnown RBP14.91□□□□□ -0.02
SDF4-203ENST00000403997 FAM184AQ8NB25 1140 aa14.91□□□□□ -0.02
SDF4-203ENST00000403997 ADAMTS19Q8TE59 1207 aa14.91□□□□□ -0.02
SDF4-203ENST00000403997 DYDC2Q96IM9 177 aa14.91□□□□□ -0.02
SDF4-203ENST00000403997 CEP170P1Q96L14 293 aa14.91□□□□□ -0.02
SDF4-203ENST00000403997 LXNQ9BS40 222 aa14.91□□□□□ -0.02
SDF4-203ENST00000403997 GCOM2Q9BZD3 368 aaPredicted RBP14.91□□□□□ -0.02
SDF4-203ENST00000403997 ATP6V0A4Q9HBG4 840 aa14.91□□□□□ -0.02
SDF4-203ENST00000403997 WRAP73Q9P2S5 460 aaPredicted RBP14.91□□□□□ -0.02
SDF4-203ENST00000403997 MYO7AQ13402 2215 aa14.9□□□□□ -0.02
SDF4-203ENST00000403997 REV3LO60673 3130 aa14.9□□□□□ -0.02
SDF4-203ENST00000403997 A0A087WZ62 844 aa14.9□□□□□ -0.02
SDF4-203ENST00000403997 WNT7AO00755 349 aa14.9□□□□□ -0.02
SDF4-203ENST00000403997 NEMFO60524 1076 aa14.9□□□□□ -0.02
SDF4-203ENST00000403997 CSDE1O75534 798 aaKnown RBP14.9□□□□□ -0.02
SDF4-203ENST00000403997 TXKP42681 527 aa14.9□□□□□ -0.02
SDF4-203ENST00000403997 RBM25P49756 843 aaKnown RBP14.9□□□□□ -0.02
SDF4-203ENST00000403997 HMGN5P82970 282 aaKnown RBP14.9□□□□□ -0.02
SDF4-203ENST00000403997 CYP4A11Q02928 519 aa14.9□□□□□ -0.02
SDF4-203ENST00000403997 SPIRE1Q08AE8 756 aa14.9□□□□□ -0.02
SDF4-203ENST00000403997 FAM102BQ5T8I3 360 aa14.9□□□□□ -0.02
SDF4-203ENST00000403997 OTUD6AQ7L8S5 288 aa14.9□□□□□ -0.02
SDF4-203ENST00000403997 RHPN2Q8IUC4 686 aa14.9□□□□□ -0.02
SDF4-203ENST00000403997 TPH2Q8IWU9 490 aa14.9□□□□□ -0.02
SDF4-203ENST00000403997 C4orf19Q8IY42 314 aa14.9□□□□□ -0.02
SDF4-203ENST00000403997 ZNF579Q8NAF0 562 aaKnown RBP14.9□□□□□ -0.02
SDF4-203ENST00000403997 SLC7A3Q8WY07 619 aa14.9□□□□□ -0.02
SDF4-203ENST00000403997 FDXACB1Q9BRP7 624 aaPredicted RBP14.9□□□□□ -0.02
SDF4-203ENST00000403997 PLVAPQ9BX97 442 aa14.9□□□□□ -0.02
SDF4-203ENST00000403997 ELAC1Q9H777 363 aaKnown RBP14.9□□□□□ -0.02
SDF4-203ENST00000403997 ZSWIM4Q9H7M6 989 aa14.9□□□□□ -0.02
SDF4-203ENST00000403997 TTC12Q9H892 705 aaPredicted RBP14.9□□□□□ -0.02
SDF4-203ENST00000403997 TMEM161AQ9NX61 479 aa14.9□□□□□ -0.02
SDF4-203ENST00000403997 PLAGL2Q9UPG8 496 aa14.9□□□□□ -0.02
SDF4-203ENST00000403997 CSPG5O95196 566 aa14.89□□□□□ -0.03
SDF4-203ENST00000403997 FGFR1P11362 822 aa14.89□□□□□ -0.03
SDF4-203ENST00000403997 YWHABP31946 246 aaKnown RBP14.89□□□□□ -0.03
SDF4-203ENST00000403997 MCM7P33993 719 aa14.89□□□□□ -0.03
SDF4-203ENST00000403997 PLA2G5P39877 138 aa14.89□□□□□ -0.03
SDF4-203ENST00000403997 POLGP54098 1239 aaPredicted RBP14.89□□□□□ -0.03
SDF4-203ENST00000403997 XKR9Q5GH70 373 aa14.89□□□□□ -0.03
SDF4-203ENST00000403997 TCEAL5Q5H9L2 206 aa14.89□□□□□ -0.03
SDF4-203ENST00000403997 EP400NLQ6ZTU2 488 aa14.89□□□□□ -0.03
SDF4-203ENST00000403997 KSR1Q8IVT5 923 aa14.89□□□□□ -0.03
SDF4-203ENST00000403997 EXOC8Q8IYI6 725 aa14.89□□□□□ -0.03
SDF4-203ENST00000403997 NLRP4Q96MN2 994 aa14.89□□□□□ -0.03
SDF4-203ENST00000403997 UHRF1Q96T88 793 aaPredicted RBP14.89□□□□□ -0.03
SDF4-203ENST00000403997 EIF2AK1Q9BQI3 630 aaKnown RBP14.89□□□□□ -0.03
SDF4-203ENST00000403997 INO80BQ9C086 356 aaPredicted RBP14.89□□□□□ -0.03
SDF4-203ENST00000403997 LMAN2LQ9H0V9 348 aa14.89□□□□□ -0.03
SDF4-203ENST00000403997 NSUN3Q9H649 340 aaKnown RBP14.89□□□□□ -0.03
SDF4-203ENST00000403997 UBE2ZQ9H832 354 aaPredicted RBP14.89□□□□□ -0.03
SDF4-203ENST00000403997 ALG13Q9NP73 1137 aaKnown RBP14.89□□□□□ -0.03
SDF4-203ENST00000403997 RAPGEFL1Q9UHV5 662 aa14.89□□□□□ -0.03
SDF4-203ENST00000403997 PPME1Q9Y570 386 aa14.89□□□□□ -0.03
SDF4-203ENST00000403997 TTC28Q96AY4 2481 aa14.89□□□□□ -0.03
SDF4-203ENST00000403997 BRWD1Q9NSI6 2320 aa14.88□□□□□ -0.03
SDF4-203ENST00000403997 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.88□□□□□ -0.03
SDF4-203ENST00000403997 TNFRSF10AO00220 468 aa14.88□□□□□ -0.03
SDF4-203ENST00000403997 ZBTB39O15060 712 aa14.88□□□□□ -0.03
SDF4-203ENST00000403997 SLITRK3O94933 977 aa14.88□□□□□ -0.03
SDF4-203ENST00000403997 RFC5P40937 340 aa14.88□□□□□ -0.03
SDF4-203ENST00000403997 RABEP1Q15276 862 aa14.88□□□□□ -0.03
SDF4-203ENST00000403997 NAALADL2Q58DX5 795 aa14.88□□□□□ -0.03
SDF4-203ENST00000403997 ZNF410Q86VK4 478 aa14.88□□□□□ -0.03
SDF4-203ENST00000403997 ECHDC2Q86YB7 292 aa14.88□□□□□ -0.03
SDF4-203ENST00000403997 KLHL23Q8NBE8 558 aa14.88□□□□□ -0.03
SDF4-203ENST00000403997 RNF169Q8NCN4 708 aa14.88□□□□□ -0.03
SDF4-203ENST00000403997 P2RX5Q93086 422 aa14.88□□□□□ -0.03
SDF4-203ENST00000403997 TMEM143Q96AN5 459 aa14.88□□□□□ -0.03
SDF4-203ENST00000403997 MTMR9Q96QG7 549 aa14.88□□□□□ -0.03
SDF4-203ENST00000403997 TMEM60Q9H2L4 133 aa14.88□□□□□ -0.03
SDF4-203ENST00000403997 FOXP1Q9H334 677 aaPredicted RBP14.88□□□□□ -0.03
SDF4-203ENST00000403997 DHX33Q9H6R0 707 aaKnown RBP14.88□□□□□ -0.03
SDF4-203ENST00000403997 UPF2Q9HAU5 1272 aaKnown RBP14.88□□□□□ -0.03
SDF4-203ENST00000403997 BMP2KQ9NSY1 1161 aaPredicted RBP14.88□□□□□ -0.03
SDF4-203ENST00000403997 TYW1Q9NV66 732 aaKnown RBP14.88□□□□□ -0.03
SDF4-203ENST00000403997 PCDHB12Q9Y5F1 795 aa14.88□□□□□ -0.03
SDF4-203ENST00000403997 NLRC5Q86WI3 1866 aa14.88□□□□□ -0.03
SDF4-203ENST00000403997 TCF20Q9UGU0 1960 aaKnown RBP14.87□□□□□ -0.03
SDF4-203ENST00000403997 RALGAPA2Q2PPJ7 1873 aa14.87□□□□□ -0.03
SDF4-203ENST00000403997 HOXA2O43364 376 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms