RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 AOC1P19801 751 aa13.56□□□□□ -0.24
SPTLC1P3-201ENST00000403408 FGFR4P22455 802 aa13.56□□□□□ -0.24
SPTLC1P3-201ENST00000403408 CHMLP26374 656 aa13.56□□□□□ -0.24
SPTLC1P3-201ENST00000403408 CLCN3P51790 818 aa13.56□□□□□ -0.24
SPTLC1P3-201ENST00000403408 SMC1AQ14683 1233 aaKnown RBP13.56□□□□□ -0.24
SPTLC1P3-201ENST00000403408 CEP55Q53EZ4 464 aa13.56□□□□□ -0.24
SPTLC1P3-201ENST00000403408 MCTP2Q6DN12 878 aa13.56□□□□□ -0.24
SPTLC1P3-201ENST00000403408 TMTC3Q6ZXV5 915 aa13.56□□□□□ -0.24
SPTLC1P3-201ENST00000403408 RALYLQ86SE5 291 aaKnown RBP13.56□□□□□ -0.24
SPTLC1P3-201ENST00000403408 CCDC105Q8IYK2 499 aa13.56□□□□□ -0.24
SPTLC1P3-201ENST00000403408 SDF4Q9BRK5 362 aa13.56□□□□□ -0.24
SPTLC1P3-201ENST00000403408 ZBP1Q9H171 429 aa13.56□□□□□ -0.24
SPTLC1P3-201ENST00000403408 COL1A2P08123 1366 aa13.56□□□□□ -0.24
SPTLC1P3-201ENST00000403408 FANCMQ8IYD8 2048 aa13.56□□□□□ -0.24
SPTLC1P3-201ENST00000403408 DOCK6Q96HP0 2047 aa13.56□□□□□ -0.24
SPTLC1P3-201ENST00000403408 FAM86B1E9PN63 330 aa13.55□□□□□ -0.24
SPTLC1P3-201ENST00000403408 PRC1O43663 620 aa13.55□□□□□ -0.24
SPTLC1P3-201ENST00000403408 NARSO43776 548 aaKnown RBP13.55□□□□□ -0.24
SPTLC1P3-201ENST00000403408 N4BP1O75113 896 aaKnown RBP13.55□□□□□ -0.24
SPTLC1P3-201ENST00000403408 CXCL14O95715 111 aa13.55□□□□□ -0.24
SPTLC1P3-201ENST00000403408 FAM86B2P0C5J1 330 aa13.55□□□□□ -0.24
SPTLC1P3-201ENST00000403408 MTHFRP42898 656 aa13.55□□□□□ -0.24
SPTLC1P3-201ENST00000403408 METAP2P50579 478 aaKnown RBP eCLIP13.55□□□□□ -0.24
SPTLC1P3-201ENST00000403408 SART3Q15020 963 aaKnown RBP13.55□□□□□ -0.24
SPTLC1P3-201ENST00000403408 ANGPT1Q15389 498 aa13.55□□□□□ -0.24
SPTLC1P3-201ENST00000403408 ZNF484Q5JVG2 852 aa13.55□□□□□ -0.24
SPTLC1P3-201ENST00000403408 CES5AQ6NT32 575 aa13.55□□□□□ -0.24
SPTLC1P3-201ENST00000403408 SWSAP1Q6NVH7 229 aa13.55□□□□□ -0.24
SPTLC1P3-201ENST00000403408 PDXDC2PQ6P474 469 aa13.55□□□□□ -0.24
SPTLC1P3-201ENST00000403408 TMC5Q6UXY8 1006 aa13.55□□□□□ -0.24
SPTLC1P3-201ENST00000403408 HEATR3Q7Z4Q2 680 aa13.55□□□□□ -0.24
SPTLC1P3-201ENST00000403408 LRRC43Q8N309 656 aa13.55□□□□□ -0.24
SPTLC1P3-201ENST00000403408 TDRD5Q8NAT2 981 aaKnown RBP13.55□□□□□ -0.24
SPTLC1P3-201ENST00000403408 HELQQ8TDG4 1101 aa13.55□□□□□ -0.24
SPTLC1P3-201ENST00000403408 LZTS2Q9BRK4 669 aa13.55□□□□□ -0.24
SPTLC1P3-201ENST00000403408 LRRC2Q9BYS8 371 aa13.55□□□□□ -0.24
SPTLC1P3-201ENST00000403408 USP24Q9UPU5 2620 aa13.55□□□□□ -0.24
SPTLC1P3-201ENST00000403408 IGLV3-22A0A075B6J6 115 aa13.54□□□□□ -0.24
SPTLC1P3-201ENST00000403408 MEIS3P2A8K0S8 358 aa13.54□□□□□ -0.24
SPTLC1P3-201ENST00000403408 BACH1O14867 736 aa13.54□□□□□ -0.24
SPTLC1P3-201ENST00000403408 KIF5BP33176 963 aa13.54□□□□□ -0.24
SPTLC1P3-201ENST00000403408 PPM1AP35813 382 aa13.54□□□□□ -0.24
SPTLC1P3-201ENST00000403408 SLC26A2P50443 739 aa13.54□□□□□ -0.24
SPTLC1P3-201ENST00000403408 BCAR1P56945 870 aa13.54□□□□□ -0.24
SPTLC1P3-201ENST00000403408 FUT2Q10981 343 aa13.54□□□□□ -0.24
SPTLC1P3-201ENST00000403408 TTC22Q5TAA0 569 aa13.54□□□□□ -0.24
SPTLC1P3-201ENST00000403408 TRMT1LQ7Z2T5 733 aaKnown RBP13.54□□□□□ -0.24
SPTLC1P3-201ENST00000403408 LRRC71Q8N4P6 559 aa13.54□□□□□ -0.24
SPTLC1P3-201ENST00000403408 DTWD2Q8NBA8 298 aa13.54□□□□□ -0.24
SPTLC1P3-201ENST00000403408 RNF169Q8NCN4 708 aa13.54□□□□□ -0.24
SPTLC1P3-201ENST00000403408 CRYGNQ8WXF5 182 aa13.54□□□□□ -0.24
SPTLC1P3-201ENST00000403408 MAP4K1Q92918 833 aa13.54□□□□□ -0.24
SPTLC1P3-201ENST00000403408 ANO3Q9BYT9 981 aa13.54□□□□□ -0.24
SPTLC1P3-201ENST00000403408 ZNF302Q9NR11 478 aa13.54□□□□□ -0.24
SPTLC1P3-201ENST00000403408 USTQ9Y2C2 406 aa13.54□□□□□ -0.24
SPTLC1P3-201ENST00000403408 KRBA1A5PL33 1030 aa13.53□□□□□ -0.24
SPTLC1P3-201ENST00000403408 SGSM2O43147 1006 aa13.53□□□□□ -0.24
SPTLC1P3-201ENST00000403408 CSDE1O75534 798 aaKnown RBP13.53□□□□□ -0.24
SPTLC1P3-201ENST00000403408 SREBF1P36956 1147 aa13.53□□□□□ -0.24
SPTLC1P3-201ENST00000403408 CLK2P49760 499 aaKnown RBP13.53□□□□□ -0.24
SPTLC1P3-201ENST00000403408 GNAQP50148 359 aa13.53□□□□□ -0.24
SPTLC1P3-201ENST00000403408 NLRP11P59045 1033 aaKnown RBP13.53□□□□□ -0.24
SPTLC1P3-201ENST00000403408 KRT17Q04695 432 aa13.53□□□□□ -0.24
SPTLC1P3-201ENST00000403408 VPS52Q8N1B4 723 aa13.53□□□□□ -0.24
SPTLC1P3-201ENST00000403408 METTL13Q8N6R0 699 aa13.53□□□□□ -0.24
SPTLC1P3-201ENST00000403408 TNPO1Q92973 898 aaKnown RBP13.53□□□□□ -0.24
SPTLC1P3-201ENST00000403408 MFSD1Q9H3U5 465 aa13.53□□□□□ -0.24
SPTLC1P3-201ENST00000403408 RWDD1Q9H446 243 aaPredicted RBP13.53□□□□□ -0.24
SPTLC1P3-201ENST00000403408 KCNK12Q9HB15 430 aa13.53□□□□□ -0.24
SPTLC1P3-201ENST00000403408 RIC8AQ9NPQ8 531 aa13.53□□□□□ -0.24
SPTLC1P3-201ENST00000403408 CYP26B1Q9NR63 512 aa13.53□□□□□ -0.24
SPTLC1P3-201ENST00000403408 DBR1Q9UK59 544 aaKnown RBP13.53□□□□□ -0.24
SPTLC1P3-201ENST00000403408 MAFBQ9Y5Q3 323 aaPredicted RBP13.53□□□□□ -0.24
SPTLC1P3-201ENST00000403408 RBM8AQ9Y5S9 174 aaKnown RBP13.53□□□□□ -0.24
SPTLC1P3-201ENST00000403408 R4GN57 208 aa13.53□□□□□ -0.24
SPTLC1P3-201ENST00000403408 CNTNAP5Q8WYK1 1306 aa13.53□□□□□ -0.24
SPTLC1P3-201ENST00000403408 A0A0U1RQF3 1178 aa13.52□□□□□ -0.25
SPTLC1P3-201ENST00000403408 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.52□□□□□ -0.25
SPTLC1P3-201ENST00000403408 EDIL3O43854 480 aa13.52□□□□□ -0.25
SPTLC1P3-201ENST00000403408 ZNF862O60290 1169 aa13.52□□□□□ -0.25
SPTLC1P3-201ENST00000403408 DRP2Q13474 957 aa13.52□□□□□ -0.25
SPTLC1P3-201ENST00000403408 ATAT1Q5SQI0 421 aa13.52□□□□□ -0.25
SPTLC1P3-201ENST00000403408 FAM160B1Q5W0V3 765 aa13.52□□□□□ -0.25
SPTLC1P3-201ENST00000403408 POTEGQ6S5H5 508 aa13.52□□□□□ -0.25
SPTLC1P3-201ENST00000403408 FAM43BQ6ZT52 329 aaPredicted RBP13.52□□□□□ -0.25
SPTLC1P3-201ENST00000403408 GPR149Q86SP6 731 aa13.52□□□□□ -0.25
SPTLC1P3-201ENST00000403408 SIX5Q8N196 739 aa13.52□□□□□ -0.25
SPTLC1P3-201ENST00000403408 RSAD2Q8WXG1 361 aa13.52□□□□□ -0.25
SPTLC1P3-201ENST00000403408 LPPQ93052 612 aa13.52□□□□□ -0.25
SPTLC1P3-201ENST00000403408 DUSP12Q9UNI6 340 aa13.52□□□□□ -0.25
SPTLC1P3-201ENST00000403408 IRAK3Q9Y616 596 aa13.52□□□□□ -0.25
SPTLC1P3-201ENST00000403408 HOXA2O43364 376 aa13.51□□□□□ -0.25
SPTLC1P3-201ENST00000403408 KRT37O76014 449 aa13.51□□□□□ -0.25
SPTLC1P3-201ENST00000403408 CTSAP10619 480 aa13.51□□□□□ -0.25
SPTLC1P3-201ENST00000403408 EIF4BP23588 611 aaKnown RBP13.51□□□□□ -0.25
SPTLC1P3-201ENST00000403408 CA8P35219 290 aa13.51□□□□□ -0.25
SPTLC1P3-201ENST00000403408 GPC3P51654 580 aa13.51□□□□□ -0.25
SPTLC1P3-201ENST00000403408 TDGQ13569 410 aa13.51□□□□□ -0.25
SPTLC1P3-201ENST00000403408 LONRF3Q496Y0 759 aa13.51□□□□□ -0.25
SPTLC1P3-201ENST00000403408 ODR4Q5SWX8 454 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms