RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 IGSF9BQ9UPX0 1349 aa9.93□□□□□ -0.82
HPS4-203ENST00000402105 H0YGN5 161 aa9.93□□□□□ -0.82
HPS4-203ENST00000402105 CCDC188H7C350 402 aa9.93□□□□□ -0.82
HPS4-203ENST00000402105 QRICH1Q2TAL8 776 aa9.93□□□□□ -0.82
HPS4-203ENST00000402105 TRIM68Q6AZZ1 485 aa9.93□□□□□ -0.82
HPS4-203ENST00000402105 LRIG3Q6UXM1 1119 aa9.93□□□□□ -0.82
HPS4-203ENST00000402105 ACTRT1Q8TDG2 376 aa9.93□□□□□ -0.82
HPS4-203ENST00000402105 SYN2Q92777 582 aaPredicted RBP9.93□□□□□ -0.82
HPS4-203ENST00000402105 RUSC1Q9BVN2 902 aa9.93□□□□□ -0.82
HPS4-203ENST00000402105 NFS1Q9Y697 457 aa9.93□□□□□ -0.82
HPS4-203ENST00000402105 RASSF9O75901 435 aa9.93□□□□□ -0.82
HPS4-203ENST00000402105 TTLL1O95922 423 aa9.93□□□□□ -0.82
HPS4-203ENST00000402105 CPNE8Q86YQ8 564 aa9.93□□□□□ -0.82
HPS4-203ENST00000402105 JAMLQ86YT9 394 aa9.93□□□□□ -0.82
HPS4-203ENST00000402105 KRT35Q92764 455 aa9.93□□□□□ -0.82
HPS4-203ENST00000402105 FAM167BQ9BTA0 163 aa9.93□□□□□ -0.82
HPS4-203ENST00000402105 NOD2Q9HC29 1040 aa9.93□□□□□ -0.82
HPS4-203ENST00000402105 UBE2TQ9NPD8 197 aaPredicted RBP9.93□□□□□ -0.82
HPS4-203ENST00000402105 ABCF3Q9NUQ8 709 aa9.93□□□□□ -0.82
HPS4-203ENST00000402105 FGFR1OP2Q9NVK5 253 aa9.93□□□□□ -0.82
HPS4-203ENST00000402105 ASIC3Q9UHC3 531 aa9.93□□□□□ -0.82
HPS4-203ENST00000402105 THRAP3Q9Y2W1 955 aaKnown RBP9.93□□□□□ -0.82
HPS4-203ENST00000402105 BZW2Q9Y6E2 419 aaKnown RBP9.93□□□□□ -0.82
HPS4-203ENST00000402105 KDM3AQ9Y4C1 1321 aa9.92□□□□□ -0.82
HPS4-203ENST00000402105 CCT8L1PA6NM43 557 aa9.92□□□□□ -0.82
HPS4-203ENST00000402105 TCP11X1B4DZS4 312 aa9.92□□□□□ -0.82
HPS4-203ENST00000402105 CFBP00751 764 aa9.92□□□□□ -0.82
HPS4-203ENST00000402105 MYBL1P10243 752 aa9.92□□□□□ -0.82
HPS4-203ENST00000402105 GIT2Q14161 759 aa9.92□□□□□ -0.82
HPS4-203ENST00000402105 CLEC4GQ6UXB4 293 aa9.92□□□□□ -0.82
HPS4-203ENST00000402105 FAM47EQ6ZV65 393 aa9.92□□□□□ -0.82
HPS4-203ENST00000402105 CNBD1Q8NA66 436 aa9.92□□□□□ -0.82
HPS4-203ENST00000402105 LNX1Q8TBB1 728 aaPredicted RBP9.92□□□□□ -0.82
HPS4-203ENST00000402105 MICAL1Q8TDZ2 1067 aa9.92□□□□□ -0.82
HPS4-203ENST00000402105 SLC20A1Q8WUM9 679 aa9.92□□□□□ -0.82
HPS4-203ENST00000402105 C1orf54Q8WWF1 131 aa9.92□□□□□ -0.82
HPS4-203ENST00000402105 TATDN2Q93075 761 aa9.92□□□□□ -0.82
HPS4-203ENST00000402105 RIOX1Q9H6W3 641 aa9.92□□□□□ -0.82
HPS4-203ENST00000402105 MTRF1LQ9UGC7 380 aaKnown RBP9.92□□□□□ -0.82
HPS4-203ENST00000402105 RASAL2Q9UJF2 1139 aa9.92□□□□□ -0.82
HPS4-203ENST00000402105 COL18A1P39060 1754 aa9.92□□□□□ -0.82
HPS4-203ENST00000402105 CCDC169A6NNP5 214 aa9.92□□□□□ -0.82
HPS4-203ENST00000402105 RASGRF2O14827 1237 aa9.92□□□□□ -0.82
HPS4-203ENST00000402105 GDF11O95390 407 aa9.92□□□□□ -0.82
HPS4-203ENST00000402105 CREB1P16220 341 aa9.92□□□□□ -0.82
HPS4-203ENST00000402105 DRD4P21917 467 aa9.92□□□□□ -0.82
HPS4-203ENST00000402105 ZYXQ15942 572 aaKnown RBP9.92□□□□□ -0.82
HPS4-203ENST00000402105 ASPRV1Q53RT3 343 aa9.92□□□□□ -0.82
HPS4-203ENST00000402105 KIAA1755Q5JYT7 1200 aa9.92□□□□□ -0.82
HPS4-203ENST00000402105 LRRC57Q8N9N7 239 aa9.92□□□□□ -0.82
HPS4-203ENST00000402105 ERP44Q9BS26 406 aa9.92□□□□□ -0.82
HPS4-203ENST00000402105 RABGAP1Q9Y3P9 1069 aa9.92□□□□□ -0.82
HPS4-203ENST00000402105 ZBTB5O15062 677 aa9.91□□□□□ -0.82
HPS4-203ENST00000402105 FTLP02792 175 aaPredicted RBP9.91□□□□□ -0.82
HPS4-203ENST00000402105 KCNJ2P63252 427 aa9.91□□□□□ -0.82
HPS4-203ENST00000402105 ZNF543Q08ER8 600 aa9.91□□□□□ -0.82
HPS4-203ENST00000402105 C2CD6Q53TS8 623 aa9.91□□□□□ -0.82
HPS4-203ENST00000402105 HS2ST1Q7LGA3 356 aa9.91□□□□□ -0.82
HPS4-203ENST00000402105 FAM228AQ86W67 206 aa9.91□□□□□ -0.82
HPS4-203ENST00000402105 ALG3Q92685 438 aa9.91□□□□□ -0.82
HPS4-203ENST00000402105 RSRC1Q96IZ7 334 aaKnown RBP9.91□□□□□ -0.82
HPS4-203ENST00000402105 PWWP2AQ96N64 755 aa9.91□□□□□ -0.82
HPS4-203ENST00000402105 SERPINB13Q9UIV8 391 aa9.91□□□□□ -0.82
HPS4-203ENST00000402105 GGA1Q9UJY5 639 aa9.91□□□□□ -0.82
HPS4-203ENST00000402105 TRIM33Q9UPN9 1127 aa9.91□□□□□ -0.82
HPS4-203ENST00000402105 FRMD4BQ9Y2L6 1034 aa9.91□□□□□ -0.82
HPS4-203ENST00000402105 ALG6Q9Y672 507 aa9.91□□□□□ -0.82
HPS4-203ENST00000402105 ALS2Q96Q42 1657 aa9.91□□□□□ -0.82
HPS4-203ENST00000402105 A8MUI8 341 aa9.91□□□□□ -0.82
HPS4-203ENST00000402105 CALCAP01258 141 aa9.91□□□□□ -0.82
HPS4-203ENST00000402105 FERP16591 822 aa9.91□□□□□ -0.82
HPS4-203ENST00000402105 SSTR3P32745 418 aaPredicted RBP9.91□□□□□ -0.82
HPS4-203ENST00000402105 ARHGAP4P98171 946 aa9.91□□□□□ -0.82
HPS4-203ENST00000402105 SEMA3FQ13275 785 aa9.91□□□□□ -0.82
HPS4-203ENST00000402105 MEX3CQ5U5Q3 659 aaKnown RBP9.91□□□□□ -0.82
HPS4-203ENST00000402105 CCDC137Q6PK04 289 aaKnown RBP9.91□□□□□ -0.82
HPS4-203ENST00000402105 C6orf89Q6UWU4 347 aa9.91□□□□□ -0.82
HPS4-203ENST00000402105 NSMCE1Q8WV22 266 aa9.91□□□□□ -0.82
HPS4-203ENST00000402105 RNF25Q96BH1 459 aaPredicted RBP9.91□□□□□ -0.82
HPS4-203ENST00000402105 KLHL29Q96CT2 875 aa9.91□□□□□ -0.82
HPS4-203ENST00000402105 DDX23Q9BUQ8 820 aaKnown RBP9.91□□□□□ -0.82
HPS4-203ENST00000402105 CTNNAL1Q9UBT7 734 aa9.91□□□□□ -0.82
HPS4-203ENST00000402105 TCRBV7S2A1N4TA0A589 114 aa9.91□□□□□ -0.82
HPS4-203ENST00000402105 GOLGA8IPA6NC78 632 aa9.91□□□□□ -0.82
HPS4-203ENST00000402105 GOLGA8JA6NMD2 632 aa9.91□□□□□ -0.82
HPS4-203ENST00000402105 TISP43B9A030 160 aa9.91□□□□□ -0.82
HPS4-203ENST00000402105 FOXN3O00409 490 aaPredicted RBP9.91□□□□□ -0.82
HPS4-203ENST00000402105 DIAPH2O60879 1101 aa9.91□□□□□ -0.82
HPS4-203ENST00000402105 UBOX5O94941 541 aa9.91□□□□□ -0.82
HPS4-203ENST00000402105 MYCNP04198 464 aaPredicted RBP9.91□□□□□ -0.82
HPS4-203ENST00000402105 DLATP10515 647 aaKnown RBP9.91□□□□□ -0.82
HPS4-203ENST00000402105 GSCP56915 257 aaPredicted RBP9.91□□□□□ -0.82
HPS4-203ENST00000402105 CALCOCO2Q13137 446 aa9.91□□□□□ -0.82
HPS4-203ENST00000402105 ODR4Q5SWX8 454 aa9.91□□□□□ -0.82
HPS4-203ENST00000402105 YTHDF3Q7Z739 585 aaKnown RBP9.91□□□□□ -0.82
HPS4-203ENST00000402105 AMIGO3Q86WK7 504 aa9.91□□□□□ -0.82
HPS4-203ENST00000402105 TAB3Q8N5C8 712 aaPredicted RBP9.91□□□□□ -0.82
HPS4-203ENST00000402105 ARHGEF1Q92888 912 aaKnown RBP9.91□□□□□ -0.82
HPS4-203ENST00000402105 SLC35C1Q96A29 364 aa9.91□□□□□ -0.82
HPS4-203ENST00000402105 CCDC127Q96BQ5 260 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms