RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 MYL1P05976 194 aa18.48■□□□□ 0.55
PTPRA-205ENST00000399903 RARAP10276 462 aa18.48■□□□□ 0.55
PTPRA-205ENST00000399903 NEFHP12036 1026 aa18.48■□□□□ 0.55
PTPRA-205ENST00000399903 MSH2P43246 934 aa18.48■□□□□ 0.55
PTPRA-205ENST00000399903 DCAF17Q5H9S7 520 aaPredicted RBP18.48■□□□□ 0.55
PTPRA-205ENST00000399903 TMEM110-MUSTN1A8MSY1 372 aa18.48■□□□□ 0.55
PTPRA-205ENST00000399903 NOL4O94818 638 aa18.48■□□□□ 0.55
PTPRA-205ENST00000399903 CCND1P24385 295 aa18.48■□□□□ 0.55
PTPRA-205ENST00000399903 KIAA0825Q8IV33 1275 aa18.48■□□□□ 0.55
PTPRA-205ENST00000399903 PIGSQ96S52 555 aa18.48■□□□□ 0.55
PTPRA-205ENST00000399903 C7orf25Q9BPX7 421 aa18.48■□□□□ 0.55
PTPRA-205ENST00000399903 SLC5A4Q9NY91 659 aa18.48■□□□□ 0.55
PTPRA-205ENST00000399903 DAAM1Q9Y4D1 1078 aa18.48■□□□□ 0.55
PTPRA-205ENST00000399903 BBOX1O75936 387 aa18.47■□□□□ 0.55
PTPRA-205ENST00000399903 PAEPP09466 180 aa18.47■□□□□ 0.55
PTPRA-205ENST00000399903 LONP2Q86WA8 852 aa18.47■□□□□ 0.55
PTPRA-205ENST00000399903 FBXO25Q8TCJ0 367 aa18.47■□□□□ 0.55
PTPRA-205ENST00000399903 SEMA4AQ9H3S1 761 aa18.47■□□□□ 0.55
PTPRA-205ENST00000399903 ETNK1Q9HBU6 452 aa18.47■□□□□ 0.55
PTPRA-205ENST00000399903 ZFATQ9P243 1243 aa18.47■□□□□ 0.55
PTPRA-205ENST00000399903 GOLGA6L10A0A0M3HER8 536 aa18.47■□□□□ 0.55
PTPRA-205ENST00000399903 CCDC169A6NNP5 214 aa18.47■□□□□ 0.55
PTPRA-205ENST00000399903 ONECUT3O60422 494 aaPredicted RBP18.47■□□□□ 0.55
PTPRA-205ENST00000399903 PCP11498 1178 aaKnown RBP18.47■□□□□ 0.55
PTPRA-205ENST00000399903 ABL2P42684 1182 aa18.47■□□□□ 0.55
PTPRA-205ENST00000399903 RBM5P52756 815 aaKnown RBP eCLIP18.47■□□□□ 0.558e-6■■■■□ 20.7
PTPRA-205ENST00000399903 POLE2P56282 527 aa18.47■□□□□ 0.55
PTPRA-205ENST00000399903 RWDD2BP57060 319 aa18.47■□□□□ 0.55
PTPRA-205ENST00000399903 DR1Q01658 176 aa18.47■□□□□ 0.55
PTPRA-205ENST00000399903 NFIAQ12857 509 aa18.47■□□□□ 0.55
PTPRA-205ENST00000399903 DPP8Q6V1X1 898 aaPredicted RBP18.47■□□□□ 0.55
PTPRA-205ENST00000399903 FAM47EQ6ZV65 393 aa18.47■□□□□ 0.55
PTPRA-205ENST00000399903 DGKHQ86XP1 1220 aa18.47■□□□□ 0.55
PTPRA-205ENST00000399903 DDX12PQ92771 950 aa18.47■□□□□ 0.55
PTPRA-205ENST00000399903 FAM114A2Q9NRY5 505 aa18.47■□□□□ 0.55
PTPRA-205ENST00000399903 PTPN22Q9Y2R2 807 aa18.47■□□□□ 0.55
PTPRA-205ENST00000399903 GPR75-ASB3A0A0A6YYF3 556 aa18.46■□□□□ 0.55
PTPRA-205ENST00000399903 LINGO3P0C6S8 592 aa18.46■□□□□ 0.55
PTPRA-205ENST00000399903 AKR1B1P15121 316 aa18.46■□□□□ 0.55
PTPRA-205ENST00000399903 ADRA2BP18089 450 aa18.46■□□□□ 0.55
PTPRA-205ENST00000399903 ZNF571Q7Z3V5 609 aaPredicted RBP18.46■□□□□ 0.55
PTPRA-205ENST00000399903 ZFPM1Q8IX07 1006 aa18.46■□□□□ 0.55
PTPRA-205ENST00000399903 LARP4BQ92615 738 aaKnown RBP18.46■□□□□ 0.55
PTPRA-205ENST00000399903 COA7Q96BR5 231 aa18.46■□□□□ 0.55
PTPRA-205ENST00000399903 TMEM260Q9NX78 707 aa18.46■□□□□ 0.55
PTPRA-205ENST00000399903 G3BP2Q9UN86 482 aaKnown RBP18.46■□□□□ 0.55
PTPRA-205ENST00000399903 ZBTB12Q9Y330 459 aaPredicted RBP18.46■□□□□ 0.55
PTPRA-205ENST00000399903 DPPA5A6NC42 116 aa18.46■□□□□ 0.55
PTPRA-205ENST00000399903 MYBP10242 640 aa18.46■□□□□ 0.55
PTPRA-205ENST00000399903 SLC9A1P19634 815 aa18.46■□□□□ 0.55
PTPRA-205ENST00000399903 PPP4CP60510 307 aa18.46■□□□□ 0.55
PTPRA-205ENST00000399903 MYOCDQ8IZQ8 938 aa18.46■□□□□ 0.55
PTPRA-205ENST00000399903 SNX29Q8TEQ0 813 aa18.46■□□□□ 0.55
PTPRA-205ENST00000399903 NAF1Q96HR8 494 aaKnown RBP18.46■□□□□ 0.55
PTPRA-205ENST00000399903 DDX23Q9BUQ8 820 aaKnown RBP18.46■□□□□ 0.55
PTPRA-205ENST00000399903 SUN1O94901 812 aa18.46■□□□□ 0.55
PTPRA-205ENST00000399903 ATP4AP20648 1035 aa18.46■□□□□ 0.55
PTPRA-205ENST00000399903 SLC16A2P36021 539 aa18.46■□□□□ 0.55
PTPRA-205ENST00000399903 RAD23BP54727 409 aa18.46■□□□□ 0.55
PTPRA-205ENST00000399903 COPS2P61201 443 aa18.46■□□□□ 0.55
PTPRA-205ENST00000399903 GRM4Q14833 912 aa18.46■□□□□ 0.55
PTPRA-205ENST00000399903 ATXN2LQ8WWM7 1075 aaKnown RBP18.46■□□□□ 0.55
PTPRA-205ENST00000399903 IFT74Q96LB3 600 aa18.46■□□□□ 0.55
PTPRA-205ENST00000399903 PIDD1Q9HB75 910 aa18.46■□□□□ 0.55
PTPRA-205ENST00000399903 USP15Q9Y4E8 981 aaPredicted RBP18.46■□□□□ 0.55
PTPRA-205ENST00000399903 LRRD1A4D1F6 860 aa18.45■□□□□ 0.54
PTPRA-205ENST00000399903 ASAP2O43150 1006 aa18.45■□□□□ 0.54
PTPRA-205ENST00000399903 KRT18P05783 430 aaKnown RBP18.45■□□□□ 0.54
PTPRA-205ENST00000399903 GSTA1P08263 222 aa18.45■□□□□ 0.54
PTPRA-205ENST00000399903 IL1R1P14778 569 aa18.45■□□□□ 0.54
PTPRA-205ENST00000399903 CREB1P16220 341 aa18.45■□□□□ 0.54
PTPRA-205ENST00000399903 ZNF268Q14587 947 aaPredicted RBP18.45■□□□□ 0.54
PTPRA-205ENST00000399903 ITIH4Q14624 930 aa18.45■□□□□ 0.54
PTPRA-205ENST00000399903 IFI16Q16666 785 aaKnown RBP18.45■□□□□ 0.54
PTPRA-205ENST00000399903 AADACL2Q6P093 401 aa18.45■□□□□ 0.54
PTPRA-205ENST00000399903 RNF25Q96BH1 459 aaPredicted RBP18.45■□□□□ 0.54
PTPRA-205ENST00000399903 PAPOLBQ9NRJ5 636 aaKnown RBP18.45■□□□□ 0.54
PTPRA-205ENST00000399903 USP40Q9NVE5 1235 aa18.45■□□□□ 0.54
PTPRA-205ENST00000399903 TMEM59LQ9UK28 342 aa18.45■□□□□ 0.54
PTPRA-205ENST00000399903 NHSQ6T4R5 1651 aa18.45■□□□□ 0.54
PTPRA-205ENST00000399903 SPDYE5A6NIY4 337 aa18.45■□□□□ 0.54
PTPRA-205ENST00000399903 FKBP3Q00688 224 aaKnown RBP18.45■□□□□ 0.54
PTPRA-205ENST00000399903 LONRF1Q17RB8 773 aa18.45■□□□□ 0.54
PTPRA-205ENST00000399903 OSGEPQ9NPF4 335 aa18.45■□□□□ 0.54
PTPRA-205ENST00000399903 TMOD4Q9NZQ9 345 aa18.45■□□□□ 0.54
PTPRA-205ENST00000399903 ADAM22Q9P0K1 906 aa18.45■□□□□ 0.54
PTPRA-205ENST00000399903 TBK1Q9UHD2 729 aa18.45■□□□□ 0.54
PTPRA-205ENST00000399903 ZMYND8Q9ULU4 1186 aaPredicted RBP18.45■□□□□ 0.54
PTPRA-205ENST00000399903 KLHL33A6NCF5 533 aa18.44■□□□□ 0.54
PTPRA-205ENST00000399903 ACSL3O95573 720 aa18.44■□□□□ 0.54
PTPRA-205ENST00000399903 PDE6CP51160 858 aa18.44■□□□□ 0.54
PTPRA-205ENST00000399903 EIF3BP55884 814 aaKnown RBP18.44■□□□□ 0.54
PTPRA-205ENST00000399903 LRRC55Q6ZSA7 311 aa18.44■□□□□ 0.54
PTPRA-205ENST00000399903 PIGWQ7Z7B1 504 aa18.44■□□□□ 0.54
PTPRA-205ENST00000399903 FBF1Q8TES7 1133 aa18.44■□□□□ 0.54
PTPRA-205ENST00000399903 TLCD1Q96CP7 247 aa18.44■□□□□ 0.54
PTPRA-205ENST00000399903 CORO1CQ9ULV4 474 aaPredicted RBP18.44■□□□□ 0.54
PTPRA-205ENST00000399903 TAF1LQ8IZX4 1826 aa18.44■□□□□ 0.54
PTPRA-205ENST00000399903 THSD7AQ9UPZ6 1657 aa18.44■□□□□ 0.54
PTPRA-205ENST00000399903 CCDC188H7C350 402 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms