RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 DDAH1O94760 285 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 CCNB2O95067 398 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 DNAL1Q4LDG9 190 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 THOC1Q96FV9 657 aaKnown RBP9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 KLF18A0A0U1RQI7 1052 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 CLEC4FQ8N1N0 589 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 TSR2Q969E8 191 aaKnown RBP9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 WDR91A4D1P6 747 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 SCGNO76038 276 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 GCNT3O95395 438 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 ARL4AP40617 200 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 MLH1P40692 756 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 CEP44Q9C0F1 390 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 GJA8P48165 433 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 TRAPPC10P48553 1259 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 TOM1L2Q6ZVM7 507 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 ZNF804AQ7Z570 1209 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 IGSF3O75054 1194 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 P3H2Q8IVL5 708 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 LSM14BQ9BX40 385 aaKnown RBP9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 HDHD2Q9H0R4 259 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 RNPEPQ9H4A4 650 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 RMI1Q9H9A7 625 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 CAMSAP2Q08AD1 1489 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 EXOC3O60645 756 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 TMED2Q15363 201 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 CDC73Q6P1J9 531 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 KRT27Q7Z3Y8 459 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 SKAP2O75563 359 aaPredicted RBP9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 PSMD4P55036 377 aaKnown RBP9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 GSTA3Q16772 222 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 TTBK2Q6IQ55 1244 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 ZBTB8OSQ8IWT0 167 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 S100A13Q99584 98 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 AIFM2Q9BRQ8 373 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 SYNGAP1Q96PV0 1343 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 DAPK1P53355 1430 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 CCNCP24863 283 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 TRIM32Q13049 653 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 STX5Q13190 355 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 PDIK1LQ8N165 341 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 FMO2Q99518 471 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 TRIM62Q9BVG3 475 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 KLHL11Q9NVR0 708 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 PPARGC1AQ9UBK2 798 aaKnown RBP9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 C1orf189Q5VU69 101 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 KSR2Q6VAB6 950 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 RASSF3Q86WH2 238 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 DNM3Q9UQ16 869 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 CALB1P05937 261 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 POSTNQ15063 836 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 NANOGNBQ7Z5D8 188 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 CYGBQ8WWM9 190 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 TXNDC2Q86VQ3 553 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 RNFT2Q96EX2 444 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 C6orf229H3BNL8 230 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 DMP1Q13316 513 aaPredicted RBP9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 ALDH1L2Q3SY69 923 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 PJA1Q8NG27 643 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 BTBD3Q9Y2F9 522 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 TTC3P53804 2025 aa9.11□□□□□ -0.95
CACNA1C-220ENST00000399655 MFAP3LO75121 409 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 PLCG1P19174 1290 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 TMEM154Q6P9G4 183 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 DPF3Q92784 378 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 L3MBTL2Q969R5 705 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 CLMNQ96JQ2 1002 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 LRRC53A6NM62 1247 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 MED26O95402 600 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 YY1P25490 414 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 PDE4DQ08499 809 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 C16orf89Q6UX73 402 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 CCDC60Q8IWA6 550 aaPredicted RBP9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 CATSPER2Q96P56 530 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 SLITRK2Q9H156 845 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 RWDD2AQ9UIY3 292 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 HPCAL4Q9UM19 191 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 MED7O43513 233 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 ABL1P00519 1130 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 TMPRSS15P98073 1019 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 AKAP1Q92667 903 aaKnown RBP eCLIP9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 OSBPL11Q9BXB4 747 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 TEX13AQ9BXU3 409 aaPredicted RBP9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 MAN1C1Q9NR34 630 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 PICK1Q9NRD5 415 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 AATFQ9NY61 560 aaKnown RBP eCLIP9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 STK17AQ9UEE5 414 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 TMEM5Q9Y2B1 443 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 UBE2QL1A1L167 161 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 RGS6P49758 472 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 STX4Q12846 297 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 TRIM72Q6ZMU5 477 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 NME9Q86XW9 330 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 DZIP3Q86Y13 1208 aaKnown RBP9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 PSTPIP2Q9H939 334 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 CHRAC1Q9NRG0 131 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 KCNIP3Q9Y2W7 256 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 ADGRA3Q8IWK6 1321 aa9.1□□□□□ -0.95
CACNA1C-220ENST00000399655 E5RI56 91 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms