RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 RSPH10BP0C881 870 aa12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 KCNA1Q09470 495 aa12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 LBRQ14739 615 aaKnown RBP12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 COG2Q14746 738 aa12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 NFIXQ14938 502 aa12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 AATKQ6ZMQ8 1374 aa12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 KCNQ2O43526 872 aa12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 ZNF280CQ8ND82 737 aa12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 KLC2Q9H0B6 622 aa12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 ERVK-7P63135 1459 aa12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 LCP1P13796 627 aa12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 ALDH1A3P47895 512 aa12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 RCN2Q14257 317 aa12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 TKFCQ3LXA3 575 aa12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 PASD1Q8IV76 773 aa12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 NEK9Q8TD19 979 aa12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 TRIM54Q9BYV2 358 aa12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 KRT82Q9NSB4 513 aa12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 CRB1P82279 1406 aa12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 ABCA8O94911 1581 aa12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 SPECC1L-ADORA2AF8WAN1 911 aa12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 MAP3K13O43283 966 aa12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 SERPIND1P05546 499 aa12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 GTF2A1P52655 376 aaPredicted RBP12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 EFHC2Q5JST6 749 aa12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 DESI2Q9BSY9 194 aa12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 MRPL46Q9H2W6 279 aaKnown RBP12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 GMPSP49915 693 aaPredicted RBP12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 CAPRIN1Q14444 709 aaKnown RBP12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 RBBP7Q16576 425 aa12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 MB21D1Q8N884 522 aa12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 GIPC2Q8TF65 315 aa12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 UBE2Q2Q8WVN8 375 aa12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 CELF1Q92879 486 aaKnown RBP12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 SIK2Q9H0K1 926 aa12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 CPDO75976 1380 aa12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 MT-ND3P03897 115 aa12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 PRDX5P30044 214 aa12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 OR1G1P47890 313 aa12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 NT5C2P49902 561 aa12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 GLE1Q53GS7 698 aaKnown RBP12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 PPP4R3CPQ6ZMV5 832 aa12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 CYFIP1Q7L576 1253 aa12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 CFAP61Q8NHU2 1237 aa12.91□□□□□ -0.34
CACNA1C-213ENST00000399629 EFCAB8A8MWE9 144 aa12.9□□□□□ -0.34
CACNA1C-213ENST00000399629 P4HBP07237 508 aaKnown RBP12.9□□□□□ -0.34
CACNA1C-213ENST00000399629 ITGA4P13612 1032 aa12.9□□□□□ -0.34
CACNA1C-213ENST00000399629 HOXA7P31268 230 aaPredicted RBP12.9□□□□□ -0.34
CACNA1C-213ENST00000399629 QARSP47897 775 aaKnown RBP12.9□□□□□ -0.34
CACNA1C-213ENST00000399629 IL9RQ01113 521 aa12.9□□□□□ -0.34
CACNA1C-213ENST00000399629 SCG3Q8WXD2 468 aaKnown RBP12.9□□□□□ -0.34
CACNA1C-213ENST00000399629 GSDMAQ96QA5 445 aa12.9□□□□□ -0.34
CACNA1C-213ENST00000399629 FANCLQ9NW38 375 aa12.9□□□□□ -0.34
CACNA1C-213ENST00000399629 SENP1Q9P0U3 644 aa12.9□□□□□ -0.34
CACNA1C-213ENST00000399629 U2AF2P26368 475 aaKnown RBP eCLIP12.9□□□□□ -0.34
CACNA1C-213ENST00000399629 ANKRD20A4Q4UJ75 823 aa12.9□□□□□ -0.34
CACNA1C-213ENST00000399629 ANKRD20A8PQ5CZ79 823 aa12.9□□□□□ -0.34
CACNA1C-213ENST00000399629 ANKRD20A2Q5SQ80 823 aa12.9□□□□□ -0.34
CACNA1C-213ENST00000399629 C10orf76Q5T2E6 689 aa12.9□□□□□ -0.34
CACNA1C-213ENST00000399629 ANKRD20A1Q5TYW2 823 aa12.9□□□□□ -0.34
CACNA1C-213ENST00000399629 PPP1R18Q6NYC8 613 aa12.9□□□□□ -0.34
CACNA1C-213ENST00000399629 TMTC3Q6ZXV5 915 aa12.9□□□□□ -0.34
CACNA1C-213ENST00000399629 RMDN1Q96DB5 314 aa12.9□□□□□ -0.34
CACNA1C-213ENST00000399629 GDAP1L1Q96MZ0 367 aa12.9□□□□□ -0.34
CACNA1C-213ENST00000399629 STAG3L1P0CL83 205 aa12.9□□□□□ -0.34
CACNA1C-213ENST00000399629 PSMC5P62195 406 aa12.9□□□□□ -0.34
CACNA1C-213ENST00000399629 CCDC15Q0P6D6 951 aa12.9□□□□□ -0.34
CACNA1C-213ENST00000399629 PDE1CQ14123 709 aaPredicted RBP12.9□□□□□ -0.34
CACNA1C-213ENST00000399629 LLGL1Q15334 1064 aa12.9□□□□□ -0.34
CACNA1C-213ENST00000399629 EZH2Q15910 746 aaKnown RBP12.9□□□□□ -0.34
CACNA1C-213ENST00000399629 CYP4F22Q6NT55 531 aa12.9□□□□□ -0.34
CACNA1C-213ENST00000399629 FAN1Q9Y2M0 1017 aa12.9□□□□□ -0.34
CACNA1C-213ENST00000399629 MYO1DO94832 1006 aa12.9□□□□□ -0.34
CACNA1C-213ENST00000399629 DDX5P17844 614 aaKnown RBP12.9□□□□□ -0.34
CACNA1C-213ENST00000399629 AP1B1Q10567 949 aa12.9□□□□□ -0.34
CACNA1C-213ENST00000399629 TRIP13Q15645 432 aaPredicted RBP12.9□□□□□ -0.34
CACNA1C-213ENST00000399629 JRKLQ9Y4A0 524 aa12.9□□□□□ -0.34
CACNA1C-213ENST00000399629 NPM3O75607 178 aaKnown RBP12.9□□□□□ -0.35
CACNA1C-213ENST00000399629 SYF2O95926 243 aaKnown RBP12.9□□□□□ -0.35
CACNA1C-213ENST00000399629 HMBSP08397 361 aa12.9□□□□□ -0.35
CACNA1C-213ENST00000399629 RGS2P41220 211 aa12.9□□□□□ -0.35
CACNA1C-213ENST00000399629 OCRLQ01968 901 aa12.9□□□□□ -0.35
CACNA1C-213ENST00000399629 TTC39CQ8N584 583 aa12.9□□□□□ -0.35
CACNA1C-213ENST00000399629 SRPRBQ9Y5M8 271 aaKnown RBP12.9□□□□□ -0.35
CACNA1C-213ENST00000399629 GOLGA8KD6RF30 607 aa12.89□□□□□ -0.35
CACNA1C-213ENST00000399629 SRGAP2O75044 1071 aa12.89□□□□□ -0.35
CACNA1C-213ENST00000399629 DPEP1P16444 411 aa12.89□□□□□ -0.35
CACNA1C-213ENST00000399629 SFSWAPQ12872 951 aaKnown RBP12.89□□□□□ -0.35
CACNA1C-213ENST00000399629 PHLDB3Q6NSJ2 640 aa12.89□□□□□ -0.35
CACNA1C-213ENST00000399629 ANKRD13CQ8N6S4 541 aa12.89□□□□□ -0.35
CACNA1C-213ENST00000399629 NCLNQ969V3 563 aa12.89□□□□□ -0.35
CACNA1C-213ENST00000399629 MUC3BQ9H195 1237 aa12.89□□□□□ -0.35
CACNA1C-213ENST00000399629 RRAGCQ9HB90 399 aa12.89□□□□□ -0.35
CACNA1C-213ENST00000399629 LCMT1Q9UIC8 334 aa12.89□□□□□ -0.35
CACNA1C-213ENST00000399629 TJP3O95049 919 aa12.89□□□□□ -0.35
CACNA1C-213ENST00000399629 PLEKHA8P1O95397 391 aa12.89□□□□□ -0.35
CACNA1C-213ENST00000399629 MUM1Q2TAK8 710 aa12.89□□□□□ -0.35
CACNA1C-213ENST00000399629 MGAT5BQ3V5L5 792 aa12.89□□□□□ -0.35
CACNA1C-213ENST00000399629 C9orf131Q5VYM1 1079 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms