RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 ASB2Q96Q27 587 aa16.67■□□□□ 0.26
SMIM11A-203ENST00000399299 LXNQ9BS40 222 aa16.67■□□□□ 0.26
SMIM11A-203ENST00000399299 UPF2Q9HAU5 1272 aaKnown RBP16.67■□□□□ 0.26
SMIM11A-203ENST00000399299 CYP26B1Q9NR63 512 aa16.67■□□□□ 0.26
SMIM11A-203ENST00000399299 LRFN2Q9ULH4 789 aa16.67■□□□□ 0.26
SMIM11A-203ENST00000399299 PCDHA12Q9UN75 941 aa16.67■□□□□ 0.26
SMIM11A-203ENST00000399299 COG5Q9UP83 839 aa16.67■□□□□ 0.26
SMIM11A-203ENST00000399299 WNT7AO00755 349 aa16.66■□□□□ 0.26
SMIM11A-203ENST00000399299 CTNNB1P35222 781 aa16.66■□□□□ 0.26
SMIM11A-203ENST00000399299 ORC2Q13416 577 aaPredicted RBP16.66■□□□□ 0.26
SMIM11A-203ENST00000399299 DRP2Q13474 957 aa16.66■□□□□ 0.26
SMIM11A-203ENST00000399299 SKIV2LQ15477 1246 aaKnown RBP16.66■□□□□ 0.26
SMIM11A-203ENST00000399299 AAK1Q2M2I8 961 aa16.66■□□□□ 0.26
SMIM11A-203ENST00000399299 NCAPH2Q6IBW4 605 aa16.66■□□□□ 0.26
SMIM11A-203ENST00000399299 ZNF410Q86VK4 478 aa16.66■□□□□ 0.26
SMIM11A-203ENST00000399299 C11orf84Q9BUA3 381 aaPredicted RBP16.66■□□□□ 0.26
SMIM11A-203ENST00000399299 PLVAPQ9BX97 442 aa16.66■□□□□ 0.26
SMIM11A-203ENST00000399299 FOXP1Q9H334 677 aaPredicted RBP16.66■□□□□ 0.26
SMIM11A-203ENST00000399299 ELAC1Q9H777 363 aaKnown RBP16.66■□□□□ 0.26
SMIM11A-203ENST00000399299 ZSWIM4Q9H7M6 989 aa16.66■□□□□ 0.26
SMIM11A-203ENST00000399299 WRAP73Q9P2S5 460 aaPredicted RBP16.66■□□□□ 0.26
SMIM11A-203ENST00000399299 ATG2AQ2TAZ0 1938 aa16.66■□□□□ 0.26
SMIM11A-203ENST00000399299 ST18O60284 1047 aa16.65■□□□□ 0.26
SMIM11A-203ENST00000399299 RFC5P40937 340 aa16.65■□□□□ 0.26
SMIM11A-203ENST00000399299 FAM189BP81408 668 aa16.65■□□□□ 0.26
SMIM11A-203ENST00000399299 GUCY1B3Q02153 619 aa16.65■□□□□ 0.26
SMIM11A-203ENST00000399299 TIGD5Q53EQ6 642 aa16.65■□□□□ 0.26
SMIM11A-203ENST00000399299 PLA2G4FQ68DD2 849 aa16.65■□□□□ 0.26
SMIM11A-203ENST00000399299 OTUD6AQ7L8S5 288 aa16.65■□□□□ 0.26
SMIM11A-203ENST00000399299 FAM184AQ8NB25 1140 aa16.65■□□□□ 0.26
SMIM11A-203ENST00000399299 NEK9Q8TD19 979 aa16.65■□□□□ 0.26
SMIM11A-203ENST00000399299 NLRP7Q8WX94 980 aa16.65■□□□□ 0.26
SMIM11A-203ENST00000399299 SLC7A3Q8WY07 619 aa16.65■□□□□ 0.26
SMIM11A-203ENST00000399299 P2RX5Q93086 422 aa16.65■□□□□ 0.26
SMIM11A-203ENST00000399299 DYDC2Q96IM9 177 aa16.65■□□□□ 0.26
SMIM11A-203ENST00000399299 SCLT1Q96NL6 688 aa16.65■□□□□ 0.26
SMIM11A-203ENST00000399299 MTMR9Q96QG7 549 aa16.65■□□□□ 0.26
SMIM11A-203ENST00000399299 SH2D3AQ9BRG2 576 aa16.65■□□□□ 0.26
SMIM11A-203ENST00000399299 GCOM2Q9BZD3 368 aaPredicted RBP16.65■□□□□ 0.26
SMIM11A-203ENST00000399299 LMAN2LQ9H0V9 348 aa16.65■□□□□ 0.26
SMIM11A-203ENST00000399299 DHX33Q9H6R0 707 aaKnown RBP16.65■□□□□ 0.26
SMIM11A-203ENST00000399299 TTC12Q9H892 705 aaPredicted RBP16.65■□□□□ 0.26
SMIM11A-203ENST00000399299 TMEM161AQ9NX61 479 aa16.65■□□□□ 0.26
SMIM11A-203ENST00000399299 RGL1Q9NZL6 768 aa16.65■□□□□ 0.26
SMIM11A-203ENST00000399299 PCDHB7Q9Y5E2 793 aa16.65■□□□□ 0.26
SMIM11A-203ENST00000399299 GAS2O43903 313 aaKnown RBP16.64■□□□□ 0.25
SMIM11A-203ENST00000399299 LYPLA2O95372 231 aa16.64■□□□□ 0.25
SMIM11A-203ENST00000399299 ZSCAN20P17040 1043 aaPredicted RBP16.64■□□□□ 0.25
SMIM11A-203ENST00000399299 YWHABP31946 246 aaKnown RBP16.64■□□□□ 0.25
SMIM11A-203ENST00000399299 NPEPPSP55786 919 aa16.64■□□□□ 0.25
SMIM11A-203ENST00000399299 NAALADL2Q58DX5 795 aa16.64■□□□□ 0.25
SMIM11A-203ENST00000399299 HLA-CQ95604 372 aa16.64■□□□□ 0.25
SMIM11A-203ENST00000399299 CEP170P1Q96L14 293 aa16.64■□□□□ 0.25
SMIM11A-203ENST00000399299 HSD17B14Q9BPX1 270 aa16.64■□□□□ 0.25
SMIM11A-203ENST00000399299 EIF2AK1Q9BQI3 630 aaKnown RBP16.64■□□□□ 0.25
SMIM11A-203ENST00000399299 INO80BQ9C086 356 aaPredicted RBP16.64■□□□□ 0.25
SMIM11A-203ENST00000399299 SUCLA2Q9P2R7 463 aaPredicted RBP16.64■□□□□ 0.25
SMIM11A-203ENST00000399299 MRPL42Q9Y6G3 142 aaKnown RBP16.64■□□□□ 0.25
SMIM11A-203ENST00000399299 SLITRK3O94933 977 aa16.63■□□□□ 0.25
SMIM11A-203ENST00000399299 TXKP42681 527 aa16.63■□□□□ 0.25
SMIM11A-203ENST00000399299 POLGP54098 1239 aaPredicted RBP16.63■□□□□ 0.25
SMIM11A-203ENST00000399299 CYP4A11Q02928 519 aa16.63■□□□□ 0.25
SMIM11A-203ENST00000399299 RHPN2Q8IUC4 686 aa16.63■□□□□ 0.25
SMIM11A-203ENST00000399299 ZNF668Q96K58 619 aaPredicted RBP16.63■□□□□ 0.25
SMIM11A-203ENST00000399299 A0A087WZ62 844 aa16.62■□□□□ 0.25
SMIM11A-203ENST00000399299 HOXA2O43364 376 aa16.62■□□□□ 0.25
SMIM11A-203ENST00000399299 SFPQP23246 707 aaKnown RBP eCLIP16.62■□□□□ 0.25
SMIM11A-203ENST00000399299 MCM7P33993 719 aa16.62■□□□□ 0.25
SMIM11A-203ENST00000399299 TRAPPC10P48553 1259 aa16.62■□□□□ 0.25
SMIM11A-203ENST00000399299 GATMP50440 423 aa16.62■□□□□ 0.25
SMIM11A-203ENST00000399299 TFF2Q03403 129 aa16.62■□□□□ 0.25
SMIM11A-203ENST00000399299 CTTNQ14247 550 aaKnown RBP16.62■□□□□ 0.25
SMIM11A-203ENST00000399299 PAN2Q504Q3 1202 aaKnown RBP16.62■□□□□ 0.25
SMIM11A-203ENST00000399299 NOSTRINQ8IVI9 506 aa16.62■□□□□ 0.25
SMIM11A-203ENST00000399299 TPH2Q8IWU9 490 aa16.62■□□□□ 0.25
SMIM11A-203ENST00000399299 ZNF579Q8NAF0 562 aaKnown RBP16.62■□□□□ 0.25
SMIM11A-203ENST00000399299 FDXACB1Q9BRP7 624 aaPredicted RBP16.62■□□□□ 0.25
SMIM11A-203ENST00000399299 TMEM60Q9H2L4 133 aa16.62■□□□□ 0.25
SMIM11A-203ENST00000399299 ATP6V0A4Q9HBG4 840 aa16.62■□□□□ 0.25
SMIM11A-203ENST00000399299 CHST12Q9NRB3 414 aa16.62■□□□□ 0.25
SMIM11A-203ENST00000399299 DACT1Q9NYF0 836 aa16.62■□□□□ 0.25
SMIM11A-203ENST00000399299 KIF3AQ9Y496 699 aa16.62■□□□□ 0.25
SMIM11A-203ENST00000399299 COL4A3BPQ9Y5P4 624 aa16.62■□□□□ 0.25
SMIM11A-203ENST00000399299 MYO7AQ13402 2215 aa16.61■□□□□ 0.25
SMIM11A-203ENST00000399299 A0A0U1RQF3 1178 aa16.61■□□□□ 0.25
SMIM11A-203ENST00000399299 U2AF2P26368 475 aaKnown RBP eCLIP16.61■□□□□ 0.25
SMIM11A-203ENST00000399299 GNL2Q13823 731 aaKnown RBP16.61■□□□□ 0.25
SMIM11A-203ENST00000399299 EMC2Q15006 297 aa16.61■□□□□ 0.25
SMIM11A-203ENST00000399299 XKR9Q5GH70 373 aa16.61■□□□□ 0.25
SMIM11A-203ENST00000399299 FAM102BQ5T8I3 360 aa16.61■□□□□ 0.25
SMIM11A-203ENST00000399299 ECHDC2Q86YB7 292 aa16.61■□□□□ 0.25
SMIM11A-203ENST00000399299 TCP11Q8WWU5 503 aa16.61■□□□□ 0.25
SMIM11A-203ENST00000399299 PSPC1Q8WXF1 523 aaKnown RBP16.61■□□□□ 0.25
SMIM11A-203ENST00000399299 TBC1D32Q96NH3 1257 aa16.61■□□□□ 0.25
SMIM11A-203ENST00000399299 TRAIPQ9BWF2 469 aa16.61■□□□□ 0.25
SMIM11A-203ENST00000399299 NSUN3Q9H649 340 aaKnown RBP16.61■□□□□ 0.25
SMIM11A-203ENST00000399299 ANKEF1Q9NU02 776 aa16.61■□□□□ 0.25
SMIM11A-203ENST00000399299 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.6■□□□□ 0.25
SMIM11A-203ENST00000399299 POTEMA6NI47 508 aa16.6■□□□□ 0.25
SMIM11A-203ENST00000399299 ZBTB39O15060 712 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms