RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 MMRN2Q9H8L6 949 aa16.62■□□□□ 0.25
COL25A1-201ENST00000399126 PCDHB13Q9Y5F0 798 aa16.62■□□□□ 0.25
COL25A1-201ENST00000399126 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.62■□□□□ 0.25
COL25A1-201ENST00000399126 FARP2O94887 1054 aaPredicted RBP16.61■□□□□ 0.25
COL25A1-201ENST00000399126 MARSP56192 900 aaKnown RBP16.61■□□□□ 0.25
COL25A1-201ENST00000399126 PDCL2Q8N4E4 241 aa16.61■□□□□ 0.25
COL25A1-201ENST00000399126 ATP6V0A1Q93050 837 aa16.61■□□□□ 0.25
COL25A1-201ENST00000399126 PTPN18Q99952 460 aa16.61■□□□□ 0.25
COL25A1-201ENST00000399126 ANKEF1Q9NU02 776 aa16.61■□□□□ 0.25
COL25A1-201ENST00000399126 SLC16A4O15374 487 aa16.61■□□□□ 0.25
COL25A1-201ENST00000399126 ECM2O94769 699 aaPredicted RBP16.61■□□□□ 0.25
COL25A1-201ENST00000399126 PLS3P13797 630 aa16.61■□□□□ 0.25
COL25A1-201ENST00000399126 CAPN2P17655 700 aa16.61■□□□□ 0.25
COL25A1-201ENST00000399126 FECHP22830 423 aa16.61■□□□□ 0.25
COL25A1-201ENST00000399126 BSNDQ8WZ55 320 aa16.61■□□□□ 0.25
COL25A1-201ENST00000399126 CCDC51Q96ER9 411 aa16.61■□□□□ 0.25
COL25A1-201ENST00000399126 DNAJC7Q99615 494 aa16.61■□□□□ 0.25
COL25A1-201ENST00000399126 CALCOCO1Q9P1Z2 691 aa16.61■□□□□ 0.25
COL25A1-201ENST00000399126 LARSQ9P2J5 1176 aaKnown RBP16.61■□□□□ 0.25
COL25A1-201ENST00000399126 CETPP11597 493 aa16.6■□□□□ 0.25
COL25A1-201ENST00000399126 ACRBPQ8NEB7 543 aa16.6■□□□□ 0.25
COL25A1-201ENST00000399126 AGPAT3Q9NRZ7 376 aa16.6■□□□□ 0.25
COL25A1-201ENST00000399126 IGSF9BQ9UPX0 1349 aa16.6■□□□□ 0.25
COL25A1-201ENST00000399126 GSTTP1A0A1W2PQM5 241 aa16.6■□□□□ 0.25
COL25A1-201ENST00000399126 GGPS1O95749 300 aa16.6■□□□□ 0.25
COL25A1-201ENST00000399126 CYP2J2P51589 502 aa16.6■□□□□ 0.25
COL25A1-201ENST00000399126 FOXD4Q12950 439 aaPredicted RBP16.6■□□□□ 0.25
COL25A1-201ENST00000399126 DCAF17Q5H9S7 520 aaPredicted RBP16.6■□□□□ 0.25
COL25A1-201ENST00000399126 MIS18BP1Q6P0N0 1132 aa16.6■□□□□ 0.25
COL25A1-201ENST00000399126 C2orf69Q8N8R5 385 aa16.6■□□□□ 0.25
COL25A1-201ENST00000399126 OR8K1Q8NGG5 319 aa16.6■□□□□ 0.25
COL25A1-201ENST00000399126 PCYT2Q99447 389 aa16.6■□□□□ 0.25
COL25A1-201ENST00000399126 PNMA3Q9UL41 463 aa16.6■□□□□ 0.25
COL25A1-201ENST00000399126 PLXNB2O15031 1838 aa16.59■□□□□ 0.25
COL25A1-201ENST00000399126 FANCGO15287 622 aa16.59■□□□□ 0.25
COL25A1-201ENST00000399126 GNA14O95837 355 aa16.59■□□□□ 0.25
COL25A1-201ENST00000399126 GTF2A2P52657 109 aa16.59■□□□□ 0.25
COL25A1-201ENST00000399126 KCNH2Q12809 1159 aa16.59■□□□□ 0.25
COL25A1-201ENST00000399126 MTERF2Q49AM1 385 aa16.59■□□□□ 0.25
COL25A1-201ENST00000399126 SPRYD7Q5W111 196 aa16.59■□□□□ 0.25
COL25A1-201ENST00000399126 DNAJC14Q6Y2X3 702 aaPredicted RBP16.59■□□□□ 0.25
COL25A1-201ENST00000399126 ZSWIM2Q8NEG5 633 aa16.59■□□□□ 0.25
COL25A1-201ENST00000399126 GBP3Q9H0R5 595 aa16.59■□□□□ 0.25
COL25A1-201ENST00000399126 MROH8Q9H579 483 aa16.59■□□□□ 0.25
COL25A1-201ENST00000399126 XPNPEP1Q9NQW7 623 aa16.59■□□□□ 0.25
COL25A1-201ENST00000399126 ARMCX3Q9UH62 379 aaPredicted RBP16.59■□□□□ 0.25
COL25A1-201ENST00000399126 PLXNA1Q9UIW2 1896 aa16.59■□□□□ 0.25
COL25A1-201ENST00000399126 DNAH12Q6ZR08 3092 aa16.59■□□□□ 0.25
COL25A1-201ENST00000399126 GPRC5AQ8NFJ5 357 aa16.59■□□□□ 0.25
COL25A1-201ENST00000399126 COPS5Q92905 334 aa16.59■□□□□ 0.25
COL25A1-201ENST00000399126 NAA15Q9BXJ9 866 aaKnown RBP16.59■□□□□ 0.25
COL25A1-201ENST00000399126 ZNF302Q9NR11 478 aa16.59■□□□□ 0.25
COL25A1-201ENST00000399126 CYP26B1Q9NR63 512 aa16.59■□□□□ 0.25
COL25A1-201ENST00000399126 PDGFCQ9NRA1 345 aa16.59■□□□□ 0.25
COL25A1-201ENST00000399126 ADGRG1Q9Y653 693 aa16.59■□□□□ 0.25
COL25A1-201ENST00000399126 ATG7O95352 703 aa16.58■□□□□ 0.25
COL25A1-201ENST00000399126 HAUS6Q7Z4H7 955 aa16.58■□□□□ 0.25
COL25A1-201ENST00000399126 SYCP3Q8IZU3 236 aa16.58■□□□□ 0.25
COL25A1-201ENST00000399126 PCIF1Q9H4Z3 704 aa16.58■□□□□ 0.25
COL25A1-201ENST00000399126 DOCK3Q8IZD9 2030 aa16.58■□□□□ 0.24
COL25A1-201ENST00000399126 ABL1P00519 1130 aa16.58■□□□□ 0.24
COL25A1-201ENST00000399126 TCERG1LQ5VWI1 586 aa16.58■□□□□ 0.24
COL25A1-201ENST00000399126 SYT10Q6XYQ8 523 aa16.58■□□□□ 0.24
COL25A1-201ENST00000399126 OTUD6AQ7L8S5 288 aa16.58■□□□□ 0.24
COL25A1-201ENST00000399126 FRMD5Q7Z6J6 570 aa16.58■□□□□ 0.24
COL25A1-201ENST00000399126 TRIM50Q86XT4 487 aa16.58■□□□□ 0.24
COL25A1-201ENST00000399126 DRC1Q96MC2 740 aa16.58■□□□□ 0.24
COL25A1-201ENST00000399126 MAFBQ9Y5Q3 323 aaPredicted RBP16.58■□□□□ 0.24
COL25A1-201ENST00000399126 ADGRA3Q8IWK6 1321 aa16.58■□□□□ 0.24
COL25A1-201ENST00000399126 CCDC169A6NNP5 214 aa16.57■□□□□ 0.24
COL25A1-201ENST00000399126 NOL4O94818 638 aa16.57■□□□□ 0.24
COL25A1-201ENST00000399126 NPTX2P47972 431 aa16.57■□□□□ 0.24
COL25A1-201ENST00000399126 FKBP1BP68106 108 aa16.57■□□□□ 0.24
COL25A1-201ENST00000399126 ZBED6P86452 979 aa16.57■□□□□ 0.24
COL25A1-201ENST00000399126 HSDL1Q3SXM5 330 aa16.57■□□□□ 0.24
COL25A1-201ENST00000399126 CYP26C1Q6V0L0 522 aa16.57■□□□□ 0.24
COL25A1-201ENST00000399126 HS2ST1Q7LGA3 356 aa16.57■□□□□ 0.24
COL25A1-201ENST00000399126 TMTC1Q8IUR5 882 aa16.57■□□□□ 0.24
COL25A1-201ENST00000399126 RDH13Q8NBN7 331 aa16.57■□□□□ 0.24
COL25A1-201ENST00000399126 BORCS6Q96GS4 357 aa16.57■□□□□ 0.24
COL25A1-201ENST00000399126 NUP58Q9BVL2 599 aa16.57■□□□□ 0.24
COL25A1-201ENST00000399126 IRX2Q9BZI1 471 aaPredicted RBP16.57■□□□□ 0.24
COL25A1-201ENST00000399126 OGFRQ9NZT2 677 aa16.57■□□□□ 0.24
COL25A1-201ENST00000399126 DDX41Q9UJV9 622 aaKnown RBP16.57■□□□□ 0.24
COL25A1-201ENST00000399126 RPS6KL1Q9Y6S9 549 aa16.57■□□□□ 0.24
COL25A1-201ENST00000399126 UBE4BO95155 1302 aa16.57■□□□□ 0.24
COL25A1-201ENST00000399126 PLEKP08567 350 aaPredicted RBP16.57■□□□□ 0.24
COL25A1-201ENST00000399126 RPL13P26373 211 aaKnown RBP16.57■□□□□ 0.24
COL25A1-201ENST00000399126 TRIM65Q6PJ69 517 aa16.57■□□□□ 0.24
COL25A1-201ENST00000399126 RETREG2Q8NC44 543 aa16.57■□□□□ 0.24
COL25A1-201ENST00000399126 SLC35C1Q96A29 364 aa16.57■□□□□ 0.24
COL25A1-201ENST00000399126 ZBTB9Q96C00 473 aa16.57■□□□□ 0.24
COL25A1-201ENST00000399126 CBWD1Q9BRT8 395 aa16.57■□□□□ 0.24
COL25A1-201ENST00000399126 LSM14BQ9BX40 385 aaKnown RBP16.57■□□□□ 0.24
COL25A1-201ENST00000399126 NLRC4Q9NPP4 1024 aa16.57■□□□□ 0.24
COL25A1-201ENST00000399126 PDLIM7Q9NR12 457 aa16.57■□□□□ 0.24
COL25A1-201ENST00000399126 PPME1Q9Y570 386 aa16.57■□□□□ 0.24
COL25A1-201ENST00000399126 BRCA2P51587 3418 aa16.56■□□□□ 0.24
COL25A1-201ENST00000399126 UNCXA6NJT0 531 aa16.56■□□□□ 0.24
COL25A1-201ENST00000399126 ITGBL1O95965 494 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms