RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 TEKT3Q9BXF9 490 aa15.71■□□□□ 0.11
RPRD1A-202ENST00000399022 DHX36Q9H2U1 1008 aaKnown RBP15.71■□□□□ 0.11
RPRD1A-202ENST00000399022 VGLL2Q8N8G2 317 aa15.71■□□□□ 0.11
RPRD1A-202ENST00000399022 NBPF3Q9H094 633 aa15.71■□□□□ 0.11
RPRD1A-202ENST00000399022 DAGLAQ9Y4D2 1042 aa15.71■□□□□ 0.11
RPRD1A-202ENST00000399022 IGF2BP3O00425 579 aaKnown RBP eCLIP15.71■□□□□ 0.11
RPRD1A-202ENST00000399022 TTI1O43156 1089 aa15.71■□□□□ 0.11
RPRD1A-202ENST00000399022 ECEL1O95672 775 aa15.71■□□□□ 0.11
RPRD1A-202ENST00000399022 BRAFP15056 766 aa15.71■□□□□ 0.11
RPRD1A-202ENST00000399022 FERP16591 822 aa15.71■□□□□ 0.11
RPRD1A-202ENST00000399022 CA4P22748 312 aa15.71■□□□□ 0.11
RPRD1A-202ENST00000399022 HSD17B3P37058 310 aa15.71■□□□□ 0.11
RPRD1A-202ENST00000399022 HERVK_113P62684 666 aa15.71■□□□□ 0.11
RPRD1A-202ENST00000399022 LRIG3Q6UXM1 1119 aa15.71■□□□□ 0.11
RPRD1A-202ENST00000399022 TBC1D16Q8TBP0 767 aa15.71■□□□□ 0.11
RPRD1A-202ENST00000399022 KIFAP3Q92845 792 aa15.71■□□□□ 0.11
RPRD1A-202ENST00000399022 ANAPC4Q9UJX5 808 aa15.71■□□□□ 0.11
RPRD1A-202ENST00000399022 L3MBTL1Q9Y468 752 aa15.71■□□□□ 0.11
RPRD1A-202ENST00000399022 TMED1Q13445 227 aa15.71■□□□□ 0.1
RPRD1A-202ENST00000399022 PSMD6Q15008 389 aa15.71■□□□□ 0.1
RPRD1A-202ENST00000399022 LRRC37BQ96QE4 947 aa15.71■□□□□ 0.1
RPRD1A-202ENST00000399022 SUDS3Q9H7L9 328 aaPredicted RBP15.71■□□□□ 0.1
RPRD1A-202ENST00000399022 ATP6V0A4Q9HBG4 840 aa15.71■□□□□ 0.1
RPRD1A-202ENST00000399022 CEP72Q9P209 647 aa15.71■□□□□ 0.1
RPRD1A-202ENST00000399022 COL5A2P05997 1499 aaPredicted RBP15.71■□□□□ 0.1
RPRD1A-202ENST00000399022 ZSCAN5CA6NGD5 496 aaPredicted RBP15.7■□□□□ 0.1
RPRD1A-202ENST00000399022 MYBL1P10243 752 aa15.7■□□□□ 0.1
RPRD1A-202ENST00000399022 MYBL2P10244 700 aa15.7■□□□□ 0.1
RPRD1A-202ENST00000399022 NPR1P16066 1061 aa15.7■□□□□ 0.1
RPRD1A-202ENST00000399022 TNNI1P19237 187 aa15.7■□□□□ 0.1
RPRD1A-202ENST00000399022 LMNB1P20700 586 aa15.7■□□□□ 0.1
RPRD1A-202ENST00000399022 STAT2P52630 851 aa15.7■□□□□ 0.1
RPRD1A-202ENST00000399022 KLC1Q07866 573 aa15.7■□□□□ 0.1
RPRD1A-202ENST00000399022 FUKQ8N0W3 1084 aa15.7■□□□□ 0.1
RPRD1A-202ENST00000399022 RAD54LQ92698 747 aa15.7■□□□□ 0.1
RPRD1A-202ENST00000399022 CCSER1Q9C0I3 900 aa15.7■□□□□ 0.1
RPRD1A-202ENST00000399022 GCNT4Q9P109 453 aa15.7■□□□□ 0.1
RPRD1A-202ENST00000399022 EXOC7Q9UPT5 735 aa15.7■□□□□ 0.1
RPRD1A-202ENST00000399022 PIK3C2AO00443 1686 aa15.7■□□□□ 0.1
RPRD1A-202ENST00000399022 PPFIA2O75334 1257 aa15.7■□□□□ 0.1
RPRD1A-202ENST00000399022 COASYQ13057 564 aa15.7■□□□□ 0.1
RPRD1A-202ENST00000399022 C10orf76Q5T2E6 689 aa15.7■□□□□ 0.1
RPRD1A-202ENST00000399022 SPDYE1Q8NFV5 336 aaPredicted RBP15.7■□□□□ 0.1
RPRD1A-202ENST00000399022 PREPLQ4J6C6 727 aaPredicted RBP15.7■□□□□ 0.1
RPRD1A-202ENST00000399022 CTAGE3PQ8IX95 158 aa15.7■□□□□ 0.1
RPRD1A-202ENST00000399022 TAB3Q8N5C8 712 aaPredicted RBP15.7■□□□□ 0.1
RPRD1A-202ENST00000399022 TSEN2Q8NCE0 465 aaKnown RBP15.7■□□□□ 0.1
RPRD1A-202ENST00000399022 MAIP1Q8WWC4 291 aa15.7■□□□□ 0.1
RPRD1A-202ENST00000399022 CASKIN2Q8WXE0 1202 aa15.7■□□□□ 0.1
RPRD1A-202ENST00000399022 TGS1Q96RS0 853 aaKnown RBP15.7■□□□□ 0.1
RPRD1A-202ENST00000399022 SPZ1Q9BXG8 430 aa15.7■□□□□ 0.1
RPRD1A-202ENST00000399022 SFR1Q86XK3 245 aa15.69■□□□□ 0.1
RPRD1A-202ENST00000399022 MTMR4Q9NYA4 1195 aa15.69■□□□□ 0.1
RPRD1A-202ENST00000399022 F5H6K3 240 aa15.69■□□□□ 0.1
RPRD1A-202ENST00000399022 CDC25CP30307 473 aa15.69■□□□□ 0.1
RPRD1A-202ENST00000399022 SERPINB6P35237 376 aa15.69■□□□□ 0.1
RPRD1A-202ENST00000399022 CTCFP49711 727 aaPredicted RBP15.69■□□□□ 0.1
RPRD1A-202ENST00000399022 ARHGAP4P98171 946 aa15.69■□□□□ 0.1
RPRD1A-202ENST00000399022 KLRC3Q07444 240 aa15.69■□□□□ 0.1
RPRD1A-202ENST00000399022 CUL3Q13618 768 aa15.69■□□□□ 0.1
RPRD1A-202ENST00000399022 PKN1Q16512 942 aa15.69■□□□□ 0.1
RPRD1A-202ENST00000399022 SGO2Q562F6 1265 aa15.69■□□□□ 0.1
RPRD1A-202ENST00000399022 TRIM51Q9BSJ1 452 aa15.69■□□□□ 0.1
RPRD1A-202ENST00000399022 DDX20Q9UHI6 824 aaKnown RBP15.69■□□□□ 0.1
RPRD1A-202ENST00000399022 USP15Q9Y4E8 981 aaPredicted RBP15.69■□□□□ 0.1
RPRD1A-202ENST00000399022 KNDC1Q76NI1 1749 aa15.69■□□□□ 0.1
RPRD1A-202ENST00000399022 ABL1P00519 1130 aa15.69■□□□□ 0.1
RPRD1A-202ENST00000399022 GLI1P08151 1106 aa15.69■□□□□ 0.1
RPRD1A-202ENST00000399022 DYNC1I2Q13409 638 aaKnown RBP15.69■□□□□ 0.1
RPRD1A-202ENST00000399022 TMEM154Q6P9G4 183 aa15.69■□□□□ 0.1
RPRD1A-202ENST00000399022 FBXL16Q8N461 479 aa15.69■□□□□ 0.1
RPRD1A-202ENST00000399022 MSL3Q8N5Y2 521 aaKnown RBP15.69■□□□□ 0.1
RPRD1A-202ENST00000399022 GOLPH3Q9H4A6 298 aa15.69■□□□□ 0.1
RPRD1A-202ENST00000399022 TRPC6Q9Y210 931 aa15.69■□□□□ 0.1
RPRD1A-202ENST00000399022 ESRRAP11474 423 aaPredicted RBP15.69■□□□□ 0.1
RPRD1A-202ENST00000399022 AGBL2Q5U5Z8 902 aa15.69■□□□□ 0.1
RPRD1A-202ENST00000399022 ARHGEF16Q5VV41 709 aa15.69■□□□□ 0.1
RPRD1A-202ENST00000399022 SPATA21Q7Z572 469 aa15.69■□□□□ 0.1
RPRD1A-202ENST00000399022 ANAPC5Q9UJX4 755 aa15.69■□□□□ 0.1
RPRD1A-202ENST00000399022 AGTPBP1Q9UPW5 1226 aa15.69■□□□□ 0.1
RPRD1A-202ENST00000399022 AFF2P51816 1311 aa15.68■□□□□ 0.1
RPRD1A-202ENST00000399022 ERFP50548 548 aa15.68■□□□□ 0.1
RPRD1A-202ENST00000399022 CDKAL1Q5VV42 579 aa15.68■□□□□ 0.1
RPRD1A-202ENST00000399022 PDXDC1Q6P996 788 aa15.68■□□□□ 0.1
RPRD1A-202ENST00000399022 FLAD1Q8NFF5 587 aa15.68■□□□□ 0.1
RPRD1A-202ENST00000399022 GRK7Q8WTQ7 553 aa15.68■□□□□ 0.1
RPRD1A-202ENST00000399022 DLGAP2Q9P1A6 1054 aa15.68■□□□□ 0.1
RPRD1A-202ENST00000399022 PVALEFA0A1B0GWK0 134 aa15.68■□□□□ 0.1
RPRD1A-202ENST00000399022 C21orf2O43822 256 aa15.68■□□□□ 0.1
RPRD1A-202ENST00000399022 NOL3O60936 208 aaKnown RBP15.68■□□□□ 0.1
RPRD1A-202ENST00000399022 CEP120Q8N960 986 aa15.68■□□□□ 0.1
RPRD1A-202ENST00000399022 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.68■□□□□ 0.1
RPRD1A-202ENST00000399022 SLITRK6Q9H5Y7 841 aa15.68■□□□□ 0.1
RPRD1A-202ENST00000399022 FGFR1OP2Q9NVK5 253 aa15.68■□□□□ 0.1
RPRD1A-202ENST00000399022 GINS2Q9Y248 185 aa15.68■□□□□ 0.1
RPRD1A-202ENST00000399022 ARL2BPQ9Y2Y0 163 aa15.68■□□□□ 0.1
RPRD1A-202ENST00000399022 GYG2O15488 501 aa15.68■□□□□ 0.1
RPRD1A-202ENST00000399022 HSPA6P17066 643 aa15.68■□□□□ 0.1
RPRD1A-202ENST00000399022 PSMC2P35998 433 aaKnown RBP15.68■□□□□ 0.1
RPRD1A-202ENST00000399022 LRRC34Q8IZ02 419 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms