RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 MAD2L2Q9UI95 211 aa15.31■□□□□ 0.04
PCDHGA11-201ENST00000398587 FER1L4A9Z1Z3 1794 aa15.3■□□□□ 0.04
PCDHGA11-201ENST00000398587 PODXLO00592 558 aa15.3■□□□□ 0.04
PCDHGA11-201ENST00000398587 FXR2P51116 673 aaKnown RBP eCLIP15.3■□□□□ 0.04
PCDHGA11-201ENST00000398587 SEC23AQ15436 765 aa15.3■□□□□ 0.04
PCDHGA11-201ENST00000398587 PHLDB2Q86SQ0 1253 aa15.3■□□□□ 0.04
PCDHGA11-201ENST00000398587 TIPINQ9BVW5 301 aa15.3■□□□□ 0.04
PCDHGA11-201ENST00000398587 ANAPC7Q9UJX3 599 aa15.3■□□□□ 0.04
PCDHGA11-201ENST00000398587 NFU1Q9UMS0 254 aa15.3■□□□□ 0.04
PCDHGA11-201ENST00000398587 INHBAP08476 426 aa15.3■□□□□ 0.04
PCDHGA11-201ENST00000398587 TRIM49P0CI25 452 aa15.3■□□□□ 0.04
PCDHGA11-201ENST00000398587 TRIM49CP0CI26 452 aa15.3■□□□□ 0.04
PCDHGA11-201ENST00000398587 COG2Q14746 738 aa15.3■□□□□ 0.04
PCDHGA11-201ENST00000398587 CYP4F22Q6NT55 531 aa15.3■□□□□ 0.04
PCDHGA11-201ENST00000398587 CATSPER4Q7RTX7 472 aa15.3■□□□□ 0.04
PCDHGA11-201ENST00000398587 HMGCS2P54868 508 aa15.3■□□□□ 0.04
PCDHGA11-201ENST00000398587 SPOUT1Q5T280 376 aaKnown RBP15.3■□□□□ 0.04
PCDHGA11-201ENST00000398587 HEXIM2Q96MH2 286 aaKnown RBP15.3■□□□□ 0.04
PCDHGA11-201ENST00000398587 RILPQ96NA2 401 aa15.3■□□□□ 0.04
PCDHGA11-201ENST00000398587 OSBPL9Q96SU4 736 aa15.3■□□□□ 0.04
PCDHGA11-201ENST00000398587 C2orf40Q9H1Z8 148 aa15.3■□□□□ 0.04
PCDHGA11-201ENST00000398587 LRRC4Q9HBW1 653 aa15.3■□□□□ 0.04
PCDHGA11-201ENST00000398587 ZBTB12Q9Y330 459 aaPredicted RBP15.3■□□□□ 0.04
PCDHGA11-201ENST00000398587 RICTORQ6R327 1708 aa15.3■□□□□ 0.04
PCDHGA11-201ENST00000398587 MYOM1P52179 1685 aa15.3■□□□□ 0.04
PCDHGA11-201ENST00000398587 NMT1P30419 496 aaKnown RBP15.29■□□□□ 0.04
PCDHGA11-201ENST00000398587 COPB2P35606 906 aa15.29■□□□□ 0.04
PCDHGA11-201ENST00000398587 PHKA2P46019 1235 aa15.29■□□□□ 0.04
PCDHGA11-201ENST00000398587 EDRF1Q3B7T1 1238 aa15.29■□□□□ 0.04
PCDHGA11-201ENST00000398587 CC2D1AQ6P1N0 951 aaPredicted RBP15.29■□□□□ 0.04
PCDHGA11-201ENST00000398587 KCTD17Q8N5Z5 321 aa15.29■□□□□ 0.04
PCDHGA11-201ENST00000398587 TEX13BQ9BXU2 312 aa15.29■□□□□ 0.04
PCDHGA11-201ENST00000398587 SEPT10Q9P0V9 454 aa15.29■□□□□ 0.04
PCDHGA11-201ENST00000398587 ARL4AP40617 200 aa15.29■□□□□ 0.04
PCDHGA11-201ENST00000398587 TNFAIP2Q03169 654 aa15.29■□□□□ 0.04
PCDHGA11-201ENST00000398587 IFRD2Q12894 506 aaPredicted RBP15.29■□□□□ 0.04
PCDHGA11-201ENST00000398587 NNTQ13423 1086 aa15.29■□□□□ 0.04
PCDHGA11-201ENST00000398587 ENOSF1Q7L5Y1 443 aa15.29■□□□□ 0.04
PCDHGA11-201ENST00000398587 RPUSD2Q8IZ73 545 aaKnown RBP15.29■□□□□ 0.04
PCDHGA11-201ENST00000398587 SLC16A3O15427 465 aaKnown RBP15.29■□□□□ 0.04
PCDHGA11-201ENST00000398587 PRPSAP2O60256 369 aa15.29■□□□□ 0.04
PCDHGA11-201ENST00000398587 ZRANB2O95218 330 aaKnown RBP eCLIP15.29■□□□□ 0.04
PCDHGA11-201ENST00000398587 CCT5P48643 541 aa15.29■□□□□ 0.04
PCDHGA11-201ENST00000398587 FXR1P51114 621 aaKnown RBP eCLIP15.29■□□□□ 0.04
PCDHGA11-201ENST00000398587 IL9RQ01113 521 aa15.29■□□□□ 0.04
PCDHGA11-201ENST00000398587 Q3C1V9 767 aa15.29■□□□□ 0.04
PCDHGA11-201ENST00000398587 SLC38A10Q9HBR0 1119 aa15.29■□□□□ 0.04
PCDHGA11-201ENST00000398587 ARHGEF37A1IGU5 675 aa15.29■□□□□ 0.04
PCDHGA11-201ENST00000398587 BUB1BO60566 1050 aaPredicted RBP15.29■□□□□ 0.04
PCDHGA11-201ENST00000398587 GABPAQ06546 454 aa15.29■□□□□ 0.04
PCDHGA11-201ENST00000398587 METTL23Q86XA0 190 aa15.29■□□□□ 0.04
PCDHGA11-201ENST00000398587 LRRC8CQ8TDW0 803 aa15.29■□□□□ 0.04
PCDHGA11-201ENST00000398587 PPP1R16BQ96T49 567 aa15.29■□□□□ 0.04
PCDHGA11-201ENST00000398587 FAM49AQ9H0Q0 323 aaPredicted RBP15.29■□□□□ 0.04
PCDHGA11-201ENST00000398587 KCND2Q9NZV8 630 aa15.29■□□□□ 0.04
PCDHGA11-201ENST00000398587 SLC9A2Q9UBY0 812 aa15.29■□□□□ 0.04
PCDHGA11-201ENST00000398587 CNOT7Q9UIV1 285 aaKnown RBP15.29■□□□□ 0.04
PCDHGA11-201ENST00000398587 MRFAP1Q9Y605 127 aa15.29■□□□□ 0.04
PCDHGA11-201ENST00000398587 EMSYQ7Z589 1322 aa15.29■□□□□ 0.04
PCDHGA11-201ENST00000398587 TBXAS1P24557 533 aaPredicted RBP15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 IFNAR2P48551 515 aa15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 MTMR2Q13614 643 aa15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 TTLL4Q14679 1199 aa15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 NTRK3Q16288 839 aa15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 ZNF568Q3ZCX4 644 aa15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 MICALL2Q8IY33 904 aa15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 KCTD6Q8NC69 237 aa15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 PPP4R1Q8TF05 950 aa15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 WDR24Q96S15 920 aa15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 CHP1Q99653 195 aa15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 POLR3FQ9H1D9 316 aaPredicted RBP15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 SSU72P8A0A1W2PR75 194 aa15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 TCRBV5S4A2TA0A5A2 114 aa15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 ZSCAN20P17040 1043 aaPredicted RBP15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 RPA1P27694 616 aa15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 DYNLT1P63172 113 aa15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 ARMCX2Q7L311 632 aa15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 RSRC2Q7L4I2 434 aaKnown RBP15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 TXNRD3Q86VQ6 643 aa15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 RBM46Q8TBY0 533 aaKnown RBP15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 HPSEQ9Y251 543 aa15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 GMNNO75496 209 aa15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 ABL1P00519 1130 aa15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 TNS2Q63HR2 1409 aa15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 TMEM270Q6UE05 265 aa15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 TC2NQ8N9U0 490 aa15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 CFAP57Q96MR6 1250 aa15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 REEP2Q9BRK0 252 aa15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 POLLQ9UGP5 575 aa15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 PITPNM2Q9BZ72 1349 aa15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 C19orf81C9J6K1 198 aa15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 YWHABP31946 246 aaKnown RBP15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 RBM43Q6ZSC3 357 aaKnown RBP15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 RASGRP2Q7LDG7 609 aa15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 ABI1Q8IZP0 508 aa15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 FBXL13Q8NEE6 735 aa15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 SAAL1Q96ER3 474 aa15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 NBPF3Q9H094 633 aa15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 CNOT10Q9H9A5 744 aaKnown RBP15.28■□□□□ 0.04
PCDHGA11-201ENST00000398587 JPH1Q9HDC5 661 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms