RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 NFX1Q12986 1120 aaKnown RBP18.67■□□□□ 0.58
APTR-201ENST00000398043 PTGDRQ13258 359 aa18.67■□□□□ 0.58
APTR-201ENST00000398043 IL17AQ16552 155 aa18.67■□□□□ 0.58
APTR-201ENST00000398043 LARP1BQ659C4 914 aaKnown RBP18.67■□□□□ 0.58
APTR-201ENST00000398043 OTUD6AQ7L8S5 288 aa18.67■□□□□ 0.58
APTR-201ENST00000398043 CATSPER3Q86XQ3 398 aa18.67■□□□□ 0.58
APTR-201ENST00000398043 ZNF668Q96K58 619 aaPredicted RBP18.67■□□□□ 0.58
APTR-201ENST00000398043 POLR3CQ9BUI4 534 aaPredicted RBP18.67■□□□□ 0.58
APTR-201ENST00000398043 CERS4Q9HA82 394 aa18.67■□□□□ 0.58
APTR-201ENST00000398043 TUFT1Q9NNX1 390 aa18.67■□□□□ 0.58
APTR-201ENST00000398043 XPNPEP1Q9NQW7 623 aa18.67■□□□□ 0.58
APTR-201ENST00000398043 RGS18Q9NS28 235 aa18.67■□□□□ 0.58
APTR-201ENST00000398043 ANKEF1Q9NU02 776 aa18.67■□□□□ 0.58
APTR-201ENST00000398043 MYH11P35749 1972 aa18.67■□□□□ 0.58
APTR-201ENST00000398043 C9IYK1 514 aa18.66■□□□□ 0.58
APTR-201ENST00000398043 RFXAPO00287 272 aa18.66■□□□□ 0.58
APTR-201ENST00000398043 DGKIO75912 1065 aa18.66■□□□□ 0.58
APTR-201ENST00000398043 XRCC6P12956 609 aaKnown RBP eCLIP18.66■□□□□ 0.58
APTR-201ENST00000398043 CDC42EP1Q00587 391 aa18.66■□□□□ 0.58
APTR-201ENST00000398043 RILPL1Q5EBL4 403 aa18.66■□□□□ 0.58
APTR-201ENST00000398043 XKR9Q5GH70 373 aa18.66■□□□□ 0.58
APTR-201ENST00000398043 ODR4Q5SWX8 454 aa18.66■□□□□ 0.58
APTR-201ENST00000398043 MCTP1Q6DN14 999 aa18.66■□□□□ 0.58
APTR-201ENST00000398043 EXOC8Q8IYI6 725 aa18.66■□□□□ 0.58
APTR-201ENST00000398043 IGSF22Q8N9C0 903 aa18.66■□□□□ 0.58
APTR-201ENST00000398043 MAFAQ8NHW3 353 aaPredicted RBP18.66■□□□□ 0.58
APTR-201ENST00000398043 INTS4Q96HW7 963 aaKnown RBP18.66■□□□□ 0.58
APTR-201ENST00000398043 TGS1Q96RS0 853 aaKnown RBP18.66■□□□□ 0.58
APTR-201ENST00000398043 JPH2Q9BR39 696 aaPredicted RBP18.66■□□□□ 0.58
APTR-201ENST00000398043 SUCLA2Q9P2R7 463 aaPredicted RBP18.66■□□□□ 0.58
APTR-201ENST00000398043 A0A087WZ62 844 aa18.65■□□□□ 0.58
APTR-201ENST00000398043 H3BQV1 296 aa18.65■□□□□ 0.58
APTR-201ENST00000398043 RPA1P27694 616 aa18.65■□□□□ 0.58
APTR-201ENST00000398043 PRPHP41219 470 aa18.65■□□□□ 0.58
APTR-201ENST00000398043 RARRES1P49788 294 aa18.65■□□□□ 0.58
APTR-201ENST00000398043 DNM2P50570 870 aa18.65■□□□□ 0.58
APTR-201ENST00000398043 FAM189BP81408 668 aa18.65■□□□□ 0.58
APTR-201ENST00000398043 PDIA5Q14554 519 aa18.65■□□□□ 0.58
APTR-201ENST00000398043 EMC2Q15006 297 aa18.65■□□□□ 0.58
APTR-201ENST00000398043 ZNF410Q86VK4 478 aa18.65■□□□□ 0.58
APTR-201ENST00000398043 NPAS4Q8IUM7 802 aa18.65■□□□□ 0.58
APTR-201ENST00000398043 KSR1Q8IVT5 923 aa18.65■□□□□ 0.58
APTR-201ENST00000398043 SLC7A3Q8WY07 619 aa18.65■□□□□ 0.58
APTR-201ENST00000398043 ARNTL2Q8WYA1 636 aa18.65■□□□□ 0.58
APTR-201ENST00000398043 SNX21Q969T3 373 aa18.65■□□□□ 0.58
APTR-201ENST00000398043 YME1L1Q96TA2 773 aa18.65■□□□□ 0.58
APTR-201ENST00000398043 GAS2L1Q99501 681 aaPredicted RBP18.65■□□□□ 0.58
APTR-201ENST00000398043 ADAM2Q99965 735 aa18.65■□□□□ 0.58
APTR-201ENST00000398043 FDXACB1Q9BRP7 624 aaPredicted RBP18.65■□□□□ 0.58
APTR-201ENST00000398043 IFT122Q9HBG6 1241 aa18.65■□□□□ 0.58
APTR-201ENST00000398043 PLXNA4Q9HCM2 1894 aa18.65■□□□□ 0.58
APTR-201ENST00000398043 A0A087WWV3 80 aa18.64■□□□□ 0.57
APTR-201ENST00000398043 K7ELQ4 463 aaPredicted RBP18.64■□□□□ 0.57
APTR-201ENST00000398043 LAD1O00515 517 aa18.64■□□□□ 0.57
APTR-201ENST00000398043 GAS2O43903 313 aaKnown RBP18.64■□□□□ 0.57
APTR-201ENST00000398043 SARSP49591 514 aaKnown RBP18.64■□□□□ 0.57
APTR-201ENST00000398043 POLGP54098 1239 aaPredicted RBP18.64■□□□□ 0.57
APTR-201ENST00000398043 ATP2C1P98194 919 aaPredicted RBP18.64■□□□□ 0.57
APTR-201ENST00000398043 RHPN2Q8IUC4 686 aa18.64■□□□□ 0.57
APTR-201ENST00000398043 PIGOQ8TEQ8 1089 aa18.64■□□□□ 0.57
APTR-201ENST00000398043 PRPF31Q8WWY3 499 aaKnown RBP18.64■□□□□ 0.57
APTR-201ENST00000398043 NLRP7Q8WX94 980 aa18.64■□□□□ 0.57
APTR-201ENST00000398043 TMEM143Q96AN5 459 aa18.64■□□□□ 0.57
APTR-201ENST00000398043 C17orf80Q9BSJ5 609 aa18.64■□□□□ 0.57
APTR-201ENST00000398043 C1orf112Q9NSG2 853 aa18.64■□□□□ 0.57
APTR-201ENST00000398043 CSDE1O75534 798 aaKnown RBP18.63■□□□□ 0.57
APTR-201ENST00000398043 MUTP22033 750 aa18.63■□□□□ 0.57
APTR-201ENST00000398043 FGFR4P22455 802 aa18.63■□□□□ 0.57
APTR-201ENST00000398043 GRB10Q13322 594 aa18.63■□□□□ 0.57
APTR-201ENST00000398043 ECM1Q16610 540 aa18.63■□□□□ 0.57
APTR-201ENST00000398043 SLC24A5Q71RS6 500 aa18.63■□□□□ 0.57
APTR-201ENST00000398043 GCOM2Q9BZD3 368 aaPredicted RBP18.63■□□□□ 0.57
APTR-201ENST00000398043 DBR1Q9UK59 544 aaKnown RBP18.63■□□□□ 0.57
APTR-201ENST00000398043 COL4A3BPQ9Y5P4 624 aa18.63■□□□□ 0.57
APTR-201ENST00000398043 ADGRA3Q8IWK6 1321 aa18.63■□□□□ 0.57
APTR-201ENST00000398043 UNC80Q8N2C7 3258 aa18.62■□□□□ 0.57
APTR-201ENST00000398043 DGAT1O75907 488 aa18.62■□□□□ 0.57
APTR-201ENST00000398043 LAMTOR4Q0VGL1 99 aa18.62■□□□□ 0.57
APTR-201ENST00000398043 POTEGQ6S5H5 508 aa18.62■□□□□ 0.57
APTR-201ENST00000398043 FERMT3Q86UX7 667 aa18.62■□□□□ 0.57
APTR-201ENST00000398043 TCP11Q8WWU5 503 aa18.62■□□□□ 0.57
APTR-201ENST00000398043 PSPC1Q8WXF1 523 aaKnown RBP18.62■□□□□ 0.57
APTR-201ENST00000398043 CLP1Q92989 425 aaKnown RBP18.62■□□□□ 0.57
APTR-201ENST00000398043 MTRQ99707 1265 aa18.62■□□□□ 0.57
APTR-201ENST00000398043 BMP2KQ9NSY1 1161 aaPredicted RBP18.62■□□□□ 0.57
APTR-201ENST00000398043 MTCH2Q9Y6C9 303 aa18.62■□□□□ 0.57
APTR-201ENST00000398043 DENND3A2RUS2 1198 aa18.61■□□□□ 0.57
APTR-201ENST00000398043 STAG3L1P0CL83 205 aa18.61■□□□□ 0.57
APTR-201ENST00000398043 ARL2P36404 184 aa18.61■□□□□ 0.57
APTR-201ENST00000398043 CMTR2Q8IYT2 770 aaKnown RBP18.61■□□□□ 0.57
APTR-201ENST00000398043 ERMNQ8TAM6 284 aa18.61■□□□□ 0.57
APTR-201ENST00000398043 SAMD11Q96NU1 681 aa18.61■□□□□ 0.57
APTR-201ENST00000398043 NACC1Q96RE7 527 aa18.61■□□□□ 0.57
APTR-201ENST00000398043 MMTAG2Q9BU76 263 aaKnown RBP18.61■□□□□ 0.57
APTR-201ENST00000398043 ELAC1Q9H777 363 aaKnown RBP18.61■□□□□ 0.57
APTR-201ENST00000398043 MINDY3Q9H8M7 445 aa18.61■□□□□ 0.57
APTR-201ENST00000398043 RNF19AQ9NV58 838 aa18.61■□□□□ 0.57
APTR-201ENST00000398043 LRWD1Q9UFC0 647 aa18.61■□□□□ 0.57
APTR-201ENST00000398043 C5orf67F2Z3F1 127 aa18.6■□□□□ 0.57
APTR-201ENST00000398043 ASAP2O43150 1006 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms