RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 DDX42Q86XP3 938 aaKnown RBP eCLIP12.43□□□□□ -0.42
PUM3-202ENST00000397885 CCDC24Q8N4L8 307 aa12.43□□□□□ -0.42
PUM3-202ENST00000397885 NEK9Q8TD19 979 aa12.43□□□□□ -0.42
PUM3-202ENST00000397885 P2RX5Q93086 422 aa12.43□□□□□ -0.42
PUM3-202ENST00000397885 UTP4Q969X6 686 aaKnown RBP12.43□□□□□ -0.42
PUM3-202ENST00000397885 MASTLQ96GX5 879 aa12.43□□□□□ -0.42
PUM3-202ENST00000397885 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.43□□□□□ -0.422e-6■■□□□ 12.7
PUM3-202ENST00000397885 NYXQ9GZU5 481 aa12.43□□□□□ -0.42
PUM3-202ENST00000397885 WDR37Q9Y2I8 494 aa12.43□□□□□ -0.42
PUM3-202ENST00000397885 COL11A2P13942 1736 aaPredicted RBP12.43□□□□□ -0.42
PUM3-202ENST00000397885 SIGLEC16A6NMB1 481 aa12.43□□□□□ -0.42
PUM3-202ENST00000397885 DAPK3O43293 454 aa12.43□□□□□ -0.42
PUM3-202ENST00000397885 EYA4O95677 639 aa12.43□□□□□ -0.42
PUM3-202ENST00000397885 FTCDO95954 541 aa12.43□□□□□ -0.42
PUM3-202ENST00000397885 UQCRFS1P1P0C7P4 283 aa12.43□□□□□ -0.42
PUM3-202ENST00000397885 TRAPPC10P48553 1259 aa12.43□□□□□ -0.42
PUM3-202ENST00000397885 USP11P51784 963 aa12.43□□□□□ -0.42
PUM3-202ENST00000397885 CACNA2D1P54289 1103 aa12.43□□□□□ -0.42
PUM3-202ENST00000397885 GFPT1Q06210 699 aaPredicted RBP12.43□□□□□ -0.42
PUM3-202ENST00000397885 LSAMPQ13449 338 aa12.43□□□□□ -0.42
PUM3-202ENST00000397885 RASA3Q14644 834 aa12.43□□□□□ -0.42
PUM3-202ENST00000397885 ALX1Q15699 326 aa12.43□□□□□ -0.42
PUM3-202ENST00000397885 Q4G0T1 1027 aa12.43□□□□□ -0.42
PUM3-202ENST00000397885 SPDYAQ5MJ70 313 aa12.43□□□□□ -0.42
PUM3-202ENST00000397885 LONP2Q86WA8 852 aa12.43□□□□□ -0.42
PUM3-202ENST00000397885 RNF168Q8IYW5 571 aaPredicted RBP12.43□□□□□ -0.42
PUM3-202ENST00000397885 TMTC2Q8N394 836 aa12.43□□□□□ -0.42
PUM3-202ENST00000397885 ANKRD13CQ8N6S4 541 aa12.43□□□□□ -0.42
PUM3-202ENST00000397885 GATA6Q92908 595 aa12.43□□□□□ -0.42
PUM3-202ENST00000397885 CCDC85AQ96PX6 553 aaPredicted RBP12.43□□□□□ -0.42
PUM3-202ENST00000397885 NAP1L3Q99457 506 aaPredicted RBP12.43□□□□□ -0.42
PUM3-202ENST00000397885 RNF26Q9BY78 433 aaPredicted RBP12.43□□□□□ -0.42
PUM3-202ENST00000397885 CNNM1Q9NRU3 951 aa12.43□□□□□ -0.42
PUM3-202ENST00000397885 KLHL14Q9P2G3 628 aa12.43□□□□□ -0.42
PUM3-202ENST00000397885 USP20Q9Y2K6 914 aa12.43□□□□□ -0.42
PUM3-202ENST00000397885 ZNF532Q9HCE3 1301 aa12.42□□□□□ -0.42
PUM3-202ENST00000397885 LRRC53A6NM62 1247 aa12.42□□□□□ -0.42
PUM3-202ENST00000397885 TJP3O95049 919 aa12.42□□□□□ -0.42
PUM3-202ENST00000397885 FAM200BP0CF97 657 aa12.42□□□□□ -0.42
PUM3-202ENST00000397885 LONP1P36776 959 aaKnown RBP12.42□□□□□ -0.42
PUM3-202ENST00000397885 RASSF2P50749 326 aa12.42□□□□□ -0.42
PUM3-202ENST00000397885 INHBCP55103 352 aa12.42□□□□□ -0.42
PUM3-202ENST00000397885 PPARDQ03181 441 aa12.42□□□□□ -0.42
PUM3-202ENST00000397885 SLC9C1Q4G0N8 1177 aa12.42□□□□□ -0.42
PUM3-202ENST00000397885 COBLL1Q53SF7 1204 aa12.42□□□□□ -0.42
PUM3-202ENST00000397885 ARL6IP4Q66PJ3 421 aaKnown RBP12.42□□□□□ -0.42
PUM3-202ENST00000397885 DENND2CQ68D51 928 aa12.42□□□□□ -0.42
PUM3-202ENST00000397885 PDXDC1Q6P996 788 aa12.42□□□□□ -0.42
PUM3-202ENST00000397885 BAP1Q92560 729 aa12.42□□□□□ -0.42
PUM3-202ENST00000397885 ANKS1AQ92625 1134 aa12.42□□□□□ -0.42
PUM3-202ENST00000397885 FAM89AQ96GI7 184 aa12.42□□□□□ -0.42
PUM3-202ENST00000397885 NR1H4Q96RI1 486 aaPredicted RBP12.42□□□□□ -0.42
PUM3-202ENST00000397885 MAF1Q9H063 256 aa12.42□□□□□ -0.42
PUM3-202ENST00000397885 ZMYND12Q9H0C1 365 aa12.42□□□□□ -0.42
PUM3-202ENST00000397885 DPH5Q9H2P9 285 aa12.42□□□□□ -0.42
PUM3-202ENST00000397885 RNF181Q9P0P0 153 aa12.42□□□□□ -0.42
PUM3-202ENST00000397885 AKAP11Q9UKA4 1901 aa12.42□□□□□ -0.42
PUM3-202ENST00000397885 KLRG2A4D1S0 409 aaPredicted RBP12.42□□□□□ -0.42
PUM3-202ENST00000397885 OATP04181 439 aa12.42□□□□□ -0.42
PUM3-202ENST00000397885 PDE6AP16499 860 aa12.42□□□□□ -0.42
PUM3-202ENST00000397885 VWA3BQ502W6 1294 aa12.42□□□□□ -0.42
PUM3-202ENST00000397885 TTC38Q5R3I4 469 aa12.42□□□□□ -0.42
PUM3-202ENST00000397885 C10orf76Q5T2E6 689 aa12.42□□□□□ -0.42
PUM3-202ENST00000397885 HGSNATQ68CP4 663 aa12.42□□□□□ -0.42
PUM3-202ENST00000397885 MFSD5Q6N075 450 aa12.42□□□□□ -0.42
PUM3-202ENST00000397885 KIAA0825Q8IV33 1275 aa12.42□□□□□ -0.42
PUM3-202ENST00000397885 RASGEF1CQ8N431 466 aa12.42□□□□□ -0.42
PUM3-202ENST00000397885 SMC1BQ8NDV3 1235 aa12.42□□□□□ -0.42
PUM3-202ENST00000397885 PHC3Q8NDX5 983 aa12.42□□□□□ -0.42
PUM3-202ENST00000397885 PHF20Q9BVI0 1012 aa12.42□□□□□ -0.42
PUM3-202ENST00000397885 SPATA16Q9BXB7 569 aa12.42□□□□□ -0.42
PUM3-202ENST00000397885 NAPBQ9H115 298 aa12.42□□□□□ -0.42
PUM3-202ENST00000397885 PNMA3Q9UL41 463 aa12.42□□□□□ -0.42
PUM3-202ENST00000397885 KCNK3O14649 394 aa12.41□□□□□ -0.42
PUM3-202ENST00000397885 AFPP02771 609 aaKnown RBP12.41□□□□□ -0.42
PUM3-202ENST00000397885 SERPING1P05155 500 aa12.41□□□□□ -0.42
PUM3-202ENST00000397885 NPR1P16066 1061 aa12.41□□□□□ -0.42
PUM3-202ENST00000397885 LMNB1P20700 586 aa12.41□□□□□ -0.42
PUM3-202ENST00000397885 ITGA6P23229 1130 aa12.41□□□□□ -0.42
PUM3-202ENST00000397885 PMS2P54278 862 aa12.41□□□□□ -0.42
PUM3-202ENST00000397885 PTGDRQ13258 359 aa12.41□□□□□ -0.42
PUM3-202ENST00000397885 SOGA3Q5TF21 947 aa12.41□□□□□ -0.42
PUM3-202ENST00000397885 RRAGAQ7L523 313 aa12.41□□□□□ -0.42
PUM3-202ENST00000397885 FAM13CQ8NE31 585 aa12.41□□□□□ -0.42
PUM3-202ENST00000397885 IRGQQ8WZA9 623 aa12.41□□□□□ -0.42
PUM3-202ENST00000397885 CARD9Q9H257 536 aa12.41□□□□□ -0.42
PUM3-202ENST00000397885 EPB41L4BQ9H329 900 aa12.41□□□□□ -0.42
PUM3-202ENST00000397885 IL1RAPL1Q9NZN1 696 aa12.41□□□□□ -0.42
PUM3-202ENST00000397885 ATP8A1Q9Y2Q0 1164 aa12.41□□□□□ -0.42
PUM3-202ENST00000397885 POTEFA5A3E0 1075 aa12.4□□□□□ -0.42
PUM3-202ENST00000397885 TMEM221A6NGB7 291 aa12.4□□□□□ -0.42
PUM3-202ENST00000397885 TRAFD1O14545 582 aaPredicted RBP12.4□□□□□ -0.42
PUM3-202ENST00000397885 KLRC4O43908 158 aa12.4□□□□□ -0.42
PUM3-202ENST00000397885 POTEIP0CG38 1075 aa12.4□□□□□ -0.42
PUM3-202ENST00000397885 POTEJP0CG39 1038 aa12.4□□□□□ -0.42
PUM3-202ENST00000397885 DRG2P55039 364 aaKnown RBP12.4□□□□□ -0.42
PUM3-202ENST00000397885 MCL1Q07820 350 aa12.4□□□□□ -0.42
PUM3-202ENST00000397885 CNPY1Q3B7I2 92 aa12.4□□□□□ -0.42
PUM3-202ENST00000397885 POTEEQ6S8J3 1075 aa12.4□□□□□ -0.42
PUM3-202ENST00000397885 LRRC43Q8N309 656 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms