RNA–Protein interactions for RNA: ENST00000397021.5

MCF2L-206, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-206ENST00000397021 PPM1EQ8WY54 764 aa10.8□□□□□ -0.68
MCF2L-206ENST00000397021 CCDC43Q96MW1 224 aaKnown RBP10.8□□□□□ -0.68
MCF2L-206ENST00000397021 ADAM2Q99965 735 aa10.8□□□□□ -0.68
MCF2L-206ENST00000397021 FTHL17Q9BXU8 183 aa10.8□□□□□ -0.68
MCF2L-206ENST00000397021 DHX33Q9H6R0 707 aaKnown RBP10.8□□□□□ -0.68
MCF2L-206ENST00000397021 XPNPEP1Q9NQW7 623 aa10.8□□□□□ -0.68
MCF2L-206ENST00000397021 INSL6Q9Y581 213 aa10.8□□□□□ -0.68
MCF2L-206ENST00000397021 SZT2Q5T011 3432 aa10.8□□□□□ -0.68
MCF2L-206ENST00000397021 DENND3A2RUS2 1198 aa10.79□□□□□ -0.68
MCF2L-206ENST00000397021 USO1O60763 962 aaKnown RBP10.79□□□□□ -0.68
MCF2L-206ENST00000397021 LYPLA2O95372 231 aa10.79□□□□□ -0.68
MCF2L-206ENST00000397021 DARSP14868 501 aaKnown RBP10.79□□□□□ -0.68
MCF2L-206ENST00000397021 RARRES1P49788 294 aa10.79□□□□□ -0.68
MCF2L-206ENST00000397021 FXR2P51116 673 aaKnown RBP eCLIP10.79□□□□□ -0.68
MCF2L-206ENST00000397021 HTRA4P83105 476 aaPredicted RBP10.79□□□□□ -0.68
MCF2L-206ENST00000397021 ZRSR1Q15695 479 aaKnown RBP10.79□□□□□ -0.68
MCF2L-206ENST00000397021 PAN2Q504Q3 1202 aaKnown RBP10.79□□□□□ -0.68
MCF2L-206ENST00000397021 DTHD1Q6ZMT9 781 aa10.79□□□□□ -0.68
MCF2L-206ENST00000397021 ERMNQ8TAM6 284 aa10.79□□□□□ -0.68
MCF2L-206ENST00000397021 SNX29Q8TEQ0 813 aa10.79□□□□□ -0.68
MCF2L-206ENST00000397021 SNX21Q969T3 373 aa10.79□□□□□ -0.68
MCF2L-206ENST00000397021 INTS4Q96HW7 963 aaKnown RBP10.79□□□□□ -0.68
MCF2L-206ENST00000397021 GAS2L1Q99501 681 aaPredicted RBP10.79□□□□□ -0.68
MCF2L-206ENST00000397021 MTRQ99707 1265 aa10.79□□□□□ -0.68
MCF2L-206ENST00000397021 JPH2Q9BR39 696 aaPredicted RBP10.79□□□□□ -0.68
MCF2L-206ENST00000397021 C17orf80Q9BSJ5 609 aa10.79□□□□□ -0.68
MCF2L-206ENST00000397021 POLR3CQ9BUI4 534 aaPredicted RBP10.79□□□□□ -0.68
MCF2L-206ENST00000397021 GCOM2Q9BZD3 368 aaPredicted RBP10.79□□□□□ -0.68
MCF2L-206ENST00000397021 TSPYL2Q9H2G4 693 aaPredicted RBP10.79□□□□□ -0.68
MCF2L-206ENST00000397021 POLD4Q9HCU8 107 aa10.79□□□□□ -0.68
MCF2L-206ENST00000397021 TUFT1Q9NNX1 390 aa10.79□□□□□ -0.68
MCF2L-206ENST00000397021 ANKEF1Q9NU02 776 aa10.79□□□□□ -0.68
MCF2L-206ENST00000397021 COL4A3BPQ9Y5P4 624 aa10.79□□□□□ -0.68
MCF2L-206ENST00000397021 TET1Q8NFU7 2136 aa10.79□□□□□ -0.68
MCF2L-206ENST00000397021 VWA3AA6NCI4 1184 aa10.78□□□□□ -0.68
MCF2L-206ENST00000397021 PDCP20941 246 aa10.78□□□□□ -0.68
MCF2L-206ENST00000397021 RPA1P27694 616 aa10.78□□□□□ -0.68
MCF2L-206ENST00000397021 LAMTOR4Q0VGL1 99 aa10.78□□□□□ -0.68
MCF2L-206ENST00000397021 DSC3Q14574 896 aa10.78□□□□□ -0.68
MCF2L-206ENST00000397021 CCDC85BQ15834 202 aaPredicted RBP10.78□□□□□ -0.68
MCF2L-206ENST00000397021 FOXD4L5Q5VV16 416 aaPredicted RBP10.78□□□□□ -0.68
MCF2L-206ENST00000397021 MICALL1Q8N3F8 863 aa10.78□□□□□ -0.68
MCF2L-206ENST00000397021 IGSF22Q8N9C0 903 aa10.78□□□□□ -0.68
MCF2L-206ENST00000397021 ASAP3Q8TDY4 903 aa10.78□□□□□ -0.68
MCF2L-206ENST00000397021 PSPC1Q8WXF1 523 aaKnown RBP10.78□□□□□ -0.68
MCF2L-206ENST00000397021 FOXD4L4Q8WXT5 416 aaPredicted RBP10.78□□□□□ -0.68
MCF2L-206ENST00000397021 PLIN2Q99541 437 aa10.78□□□□□ -0.68
MCF2L-206ENST00000397021 ATP6V0A4Q9HBG4 840 aa10.78□□□□□ -0.68
MCF2L-206ENST00000397021 GPRC5CQ9NQ84 441 aa10.78□□□□□ -0.68
MCF2L-206ENST00000397021 RGS18Q9NS28 235 aa10.78□□□□□ -0.68
MCF2L-206ENST00000397021 LRFN2Q9ULH4 789 aa10.78□□□□□ -0.68
MCF2L-206ENST00000397021 KIAA1024Q9UPX6 916 aa10.78□□□□□ -0.68
MCF2L-206ENST00000397021 MTMR6Q9Y217 621 aa10.78□□□□□ -0.68
MCF2L-206ENST00000397021 C9IYK1 514 aa10.77□□□□□ -0.69
MCF2L-206ENST00000397021 E9PMD0 336 aa10.77□□□□□ -0.69
MCF2L-206ENST00000397021 LAD1O00515 517 aa10.77□□□□□ -0.69
MCF2L-206ENST00000397021 DGAT1O75907 488 aa10.77□□□□□ -0.69
MCF2L-206ENST00000397021 DGKIO75912 1065 aa10.77□□□□□ -0.69
MCF2L-206ENST00000397021 FGFR1P11362 822 aa10.77□□□□□ -0.69
MCF2L-206ENST00000397021 ZSCAN20P17040 1043 aaPredicted RBP10.77□□□□□ -0.69
MCF2L-206ENST00000397021 PRPHP41219 470 aa10.77□□□□□ -0.69
MCF2L-206ENST00000397021 SARSP49591 514 aaKnown RBP10.77□□□□□ -0.69
MCF2L-206ENST00000397021 ATP2C1P98194 919 aaPredicted RBP10.77□□□□□ -0.69
MCF2L-206ENST00000397021 CEBPZQ03701 1054 aaKnown RBP10.77□□□□□ -0.69
MCF2L-206ENST00000397021 RESTQ13127 1097 aa10.77□□□□□ -0.69
MCF2L-206ENST00000397021 GRB10Q13322 594 aa10.77□□□□□ -0.69
MCF2L-206ENST00000397021 BTG3Q14201 252 aaPredicted RBP10.77□□□□□ -0.69
MCF2L-206ENST00000397021 PDIA5Q14554 519 aa10.77□□□□□ -0.69
MCF2L-206ENST00000397021 SF3A1Q15459 793 aaKnown RBP10.77□□□□□ -0.69
MCF2L-206ENST00000397021 ODR4Q5SWX8 454 aa10.77□□□□□ -0.69
MCF2L-206ENST00000397021 FAM102BQ5T8I3 360 aa10.77□□□□□ -0.69
MCF2L-206ENST00000397021 KRT79Q5XKE5 535 aa10.77□□□□□ -0.69
MCF2L-206ENST00000397021 HAUS3Q68CZ6 603 aa10.77□□□□□ -0.69
MCF2L-206ENST00000397021 PADI6Q6TGC4 694 aa10.77□□□□□ -0.69
MCF2L-206ENST00000397021 CATSPER4Q7RTX7 472 aa10.77□□□□□ -0.69
MCF2L-206ENST00000397021 BRAPQ7Z569 592 aa10.77□□□□□ -0.69
MCF2L-206ENST00000397021 ZNF410Q86VK4 478 aa10.77□□□□□ -0.69
MCF2L-206ENST00000397021 NPAS4Q8IUM7 802 aa10.77□□□□□ -0.69
MCF2L-206ENST00000397021 CRIPAKQ8N1N5 446 aa10.77□□□□□ -0.69
MCF2L-206ENST00000397021 FIBCD1Q8N539 461 aa10.77□□□□□ -0.69
MCF2L-206ENST00000397021 RNF149Q8NC42 400 aa10.77□□□□□ -0.69
MCF2L-206ENST00000397021 RNF169Q8NCN4 708 aa10.77□□□□□ -0.69
MCF2L-206ENST00000397021 MAFAQ8NHW3 353 aaPredicted RBP10.77□□□□□ -0.69
MCF2L-206ENST00000397021 SP7Q8TDD2 431 aaPredicted RBP10.77□□□□□ -0.69
MCF2L-206ENST00000397021 GDPD5Q8WTR4 605 aa10.77□□□□□ -0.69
MCF2L-206ENST00000397021 TCP11Q8WWU5 503 aa10.77□□□□□ -0.69
MCF2L-206ENST00000397021 NACC1Q96RE7 527 aa10.77□□□□□ -0.69
MCF2L-206ENST00000397021 TGS1Q96RS0 853 aaKnown RBP10.77□□□□□ -0.69
MCF2L-206ENST00000397021 MMTAG2Q9BU76 263 aaKnown RBP10.77□□□□□ -0.69
MCF2L-206ENST00000397021 POLR3FQ9H1D9 316 aaPredicted RBP10.77□□□□□ -0.69
MCF2L-206ENST00000397021 MINDY3Q9H8M7 445 aa10.77□□□□□ -0.69
MCF2L-206ENST00000397021 IFT122Q9HBG6 1241 aa10.77□□□□□ -0.69
MCF2L-206ENST00000397021 DDX19AQ9NUU7 478 aaKnown RBP10.77□□□□□ -0.69
MCF2L-206ENST00000397021 PPME1Q9Y570 386 aa10.77□□□□□ -0.69
MCF2L-206ENST00000397021 PCDHB7Q9Y5E2 793 aa10.77□□□□□ -0.69
MCF2L-206ENST00000397021 CLIC4Q9Y696 253 aa10.77□□□□□ -0.69
MCF2L-206ENST00000397021 ARHGEF35A5YM69 484 aa10.76□□□□□ -0.69
MCF2L-206ENST00000397021 STX6O43752 255 aa10.76□□□□□ -0.69
MCF2L-206ENST00000397021 CSPG5O95196 566 aa10.76□□□□□ -0.69
MCF2L-206ENST00000397021 HSP90AA1P07900 732 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms