RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 NRBP2Q9NSY0 501 aa11.81□□□□□ -0.52
NUP98-205ENST00000397007 KCNH3Q9ULD8 1083 aa11.81□□□□□ -0.52
NUP98-205ENST00000397007 LIG1P18858 919 aa11.81□□□□□ -0.52
NUP98-205ENST00000397007 BMP8BP34820 402 aa11.81□□□□□ -0.52
NUP98-205ENST00000397007 UBE2HP62256 183 aa11.81□□□□□ -0.52
NUP98-205ENST00000397007 BMT2Q1RMZ1 405 aa11.81□□□□□ -0.52
NUP98-205ENST00000397007 EXOC8Q8IYI6 725 aa11.81□□□□□ -0.52
NUP98-205ENST00000397007 PPP1R13LQ8WUF5 828 aa11.81□□□□□ -0.52
NUP98-205ENST00000397007 LINC01599Q8WXQ3 324 aa11.81□□□□□ -0.52
NUP98-205ENST00000397007 OLFML3Q9NRN5 406 aa11.81□□□□□ -0.52
NUP98-205ENST00000397007 KIAA0100Q14667 2235 aaKnown RBP11.81□□□□□ -0.52
NUP98-205ENST00000397007 CDH23Q9H251 3354 aa11.81□□□□□ -0.52
NUP98-205ENST00000397007 RFC2P35250 354 aa11.81□□□□□ -0.52
NUP98-205ENST00000397007 CEBPZQ03701 1054 aaKnown RBP11.81□□□□□ -0.52
NUP98-205ENST00000397007 CAPSQ13938 189 aa11.81□□□□□ -0.52
NUP98-205ENST00000397007 PLEKHG4Q58EX7 1191 aa11.81□□□□□ -0.52
NUP98-205ENST00000397007 TPH2Q8IWU9 490 aa11.81□□□□□ -0.52
NUP98-205ENST00000397007 ZC3H3Q8IXZ2 948 aaKnown RBP11.81□□□□□ -0.52
NUP98-205ENST00000397007 MRPS27Q92552 414 aaKnown RBP11.81□□□□□ -0.52
NUP98-205ENST00000397007 PAGE5Q96GU1 130 aa11.81□□□□□ -0.52
NUP98-205ENST00000397007 TMX1Q9H3N1 280 aa11.81□□□□□ -0.52
NUP98-205ENST00000397007 CHD7Q9P2D1 2997 aa11.81□□□□□ -0.52
NUP98-205ENST00000397007 ADRB2P07550 413 aa11.8□□□□□ -0.52
NUP98-205ENST00000397007 MBTD1Q05BQ5 628 aa11.8□□□□□ -0.52
NUP98-205ENST00000397007 PADI6Q6TGC4 694 aa11.8□□□□□ -0.52
NUP98-205ENST00000397007 KRBA2Q6ZNG9 492 aa11.8□□□□□ -0.52
NUP98-205ENST00000397007 ZNF410Q86VK4 478 aa11.8□□□□□ -0.52
NUP98-205ENST00000397007 BHMT2Q9H2M3 363 aa11.8□□□□□ -0.52
NUP98-205ENST00000397007 FZD8Q9H461 694 aa11.8□□□□□ -0.52
NUP98-205ENST00000397007 ERVK-5Q9HDB9 667 aa11.8□□□□□ -0.52
NUP98-205ENST00000397007 LINC00271P0C7V0 271 aa11.8□□□□□ -0.52
NUP98-205ENST00000397007 MARK3P27448 753 aa11.8□□□□□ -0.52
NUP98-205ENST00000397007 FAM160A1Q05DH4 1040 aa11.8□□□□□ -0.52
NUP98-205ENST00000397007 IER5Q5VY09 327 aa11.8□□□□□ -0.52
NUP98-205ENST00000397007 GDF15Q99988 308 aa11.8□□□□□ -0.52
NUP98-205ENST00000397007 REEP2Q9BRK0 252 aa11.8□□□□□ -0.52
NUP98-205ENST00000397007 STYXL1Q9Y6J8 313 aa11.8□□□□□ -0.52
NUP98-205ENST00000397007 MEFVO15553 781 aaPredicted RBP11.8□□□□□ -0.52
NUP98-205ENST00000397007 NR1I2O75469 434 aa11.8□□□□□ -0.52
NUP98-205ENST00000397007 SCP2P22307 547 aa11.8□□□□□ -0.52
NUP98-205ENST00000397007 MRPS6P82932 125 aaKnown RBP11.8□□□□□ -0.52
NUP98-205ENST00000397007 FBXO47Q5MNV8 452 aa11.8□□□□□ -0.52
NUP98-205ENST00000397007 ZNF618Q5T7W0 954 aa11.8□□□□□ -0.52
NUP98-205ENST00000397007 OTUD6AQ7L8S5 288 aa11.8□□□□□ -0.52
NUP98-205ENST00000397007 C7orf31Q8N865 590 aa11.8□□□□□ -0.52
NUP98-205ENST00000397007 PYM1Q9BRP8 204 aaKnown RBP11.8□□□□□ -0.52
NUP98-205ENST00000397007 SEPT9Q9UHD8 586 aaPredicted RBP11.8□□□□□ -0.52
NUP98-205ENST00000397007 GNAT1P11488 350 aa11.79□□□□□ -0.52
NUP98-205ENST00000397007 MCM6Q14566 821 aa11.79□□□□□ -0.52
NUP98-205ENST00000397007 LPIN1Q14693 890 aa11.79□□□□□ -0.52
NUP98-205ENST00000397007 MFSD5Q6N075 450 aa11.79□□□□□ -0.52
NUP98-205ENST00000397007 GLG1Q92896 1179 aa11.79□□□□□ -0.52
NUP98-205ENST00000397007 MINDY3Q9H8M7 445 aa11.79□□□□□ -0.52
NUP98-205ENST00000397007 ATP6V0A4Q9HBG4 840 aa11.79□□□□□ -0.52
NUP98-205ENST00000397007 LAMA3Q16787 3333 aa11.79□□□□□ -0.52
NUP98-205ENST00000397007 A0A1B0GVL5 298 aa11.79□□□□□ -0.52
NUP98-205ENST00000397007 HOXA11P31270 313 aaPredicted RBP11.79□□□□□ -0.52
NUP98-205ENST00000397007 PTENP60484 403 aa11.79□□□□□ -0.52
NUP98-205ENST00000397007 PCBP1Q15365 356 aaKnown RBP eCLIP11.79□□□□□ -0.52
NUP98-205ENST00000397007 CCDC73Q6ZRK6 1079 aa11.79□□□□□ -0.52
NUP98-205ENST00000397007 FGFBP2Q9BYJ0 223 aa11.79□□□□□ -0.52
NUP98-205ENST00000397007 TMEM134Q9H6X4 195 aa11.79□□□□□ -0.52
NUP98-205ENST00000397007 BMP6P22004 513 aa11.79□□□□□ -0.52
NUP98-205ENST00000397007 CRYBB1P53674 252 aaPredicted RBP11.79□□□□□ -0.52
NUP98-205ENST00000397007 EPHB4P54760 987 aa11.79□□□□□ -0.52
NUP98-205ENST00000397007 FAM189BP81408 668 aa11.79□□□□□ -0.52
NUP98-205ENST00000397007 GTF2BQ00403 316 aa11.79□□□□□ -0.52
NUP98-205ENST00000397007 SP4Q02446 784 aa11.79□□□□□ -0.52
NUP98-205ENST00000397007 EFCAB12Q6NXP0 572 aa11.79□□□□□ -0.52
NUP98-205ENST00000397007 FOXR2Q6PJQ5 311 aa11.79□□□□□ -0.52
NUP98-205ENST00000397007 TMEM161BQ8NDZ6 487 aa11.79□□□□□ -0.52
NUP98-205ENST00000397007 DNM3Q9UQ16 869 aa11.79□□□□□ -0.52
NUP98-205ENST00000397007 ZNF202O95125 648 aa11.78□□□□□ -0.52
NUP98-205ENST00000397007 PARNO95453 639 aaKnown RBP11.78□□□□□ -0.52
NUP98-205ENST00000397007 PRR29P0C7W0 189 aa11.78□□□□□ -0.52
NUP98-205ENST00000397007 LAMTOR4Q0VGL1 99 aa11.78□□□□□ -0.52
NUP98-205ENST00000397007 KCNB1Q14721 858 aa11.78□□□□□ -0.52
NUP98-205ENST00000397007 MCPH1Q8NEM0 835 aa11.78□□□□□ -0.52
NUP98-205ENST00000397007 A0A087WWV3 80 aa11.78□□□□□ -0.52
NUP98-205ENST00000397007 RSPH10B2B2RC85 870 aa11.78□□□□□ -0.52
NUP98-205ENST00000397007 POLR2DO15514 142 aaKnown RBP11.78□□□□□ -0.52
NUP98-205ENST00000397007 RSPH10BP0C881 870 aa11.78□□□□□ -0.52
NUP98-205ENST00000397007 NAMPTP43490 491 aa11.78□□□□□ -0.52
NUP98-205ENST00000397007 RTN4RL1Q86UN2 441 aaPredicted RBP11.78□□□□□ -0.52
NUP98-205ENST00000397007 CEP170P1Q96L14 293 aa11.78□□□□□ -0.52
NUP98-205ENST00000397007 SPTBN5Q9NRC6 3674 aaKnown RBP11.78□□□□□ -0.52
NUP98-205ENST00000397007 NPHP3-ACAD11A0A0J9YXS1 232 aa11.78□□□□□ -0.52
NUP98-205ENST00000397007 DDX11L8A8MPP1 907 aa11.78□□□□□ -0.52
NUP98-205ENST00000397007 ASAP2O43150 1006 aa11.78□□□□□ -0.52
NUP98-205ENST00000397007 DARSP14868 501 aaKnown RBP11.78□□□□□ -0.52
NUP98-205ENST00000397007 SELPP16109 830 aa11.78□□□□□ -0.52
NUP98-205ENST00000397007 ME1P48163 572 aa11.78□□□□□ -0.52
NUP98-205ENST00000397007 CELF4Q9BZC1 486 aaKnown RBP11.78□□□□□ -0.52
NUP98-205ENST00000397007 GPRC5CQ9NQ84 441 aa11.78□□□□□ -0.52
NUP98-205ENST00000397007 SERTAD1Q9UHV2 236 aa11.78□□□□□ -0.52
NUP98-205ENST00000397007 PVALEFA0A1B0GWK0 134 aa11.77□□□□□ -0.53
NUP98-205ENST00000397007 RBAK-RBAKDNI3L0D1 243 aa11.77□□□□□ -0.53
NUP98-205ENST00000397007 HIP1RO75146 1068 aa11.77□□□□□ -0.53
NUP98-205ENST00000397007 RHOBTB3O94955 611 aa11.77□□□□□ -0.53
NUP98-205ENST00000397007 MYCP01106 439 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms