RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 CTSAP10619 480 aa9.6□□□□□ -0.87
SCFD1-202ENST00000396629 ZSCAN20P17040 1043 aaPredicted RBP9.6□□□□□ -0.87
SCFD1-202ENST00000396629 BCAR1P56945 870 aa9.6□□□□□ -0.87
SCFD1-202ENST00000396629 NUCB1Q02818 461 aa9.6□□□□□ -0.87
SCFD1-202ENST00000396629 PTH1RQ03431 593 aa9.6□□□□□ -0.87
SCFD1-202ENST00000396629 CEP55Q53EZ4 464 aa9.6□□□□□ -0.87
SCFD1-202ENST00000396629 PDXDC2PQ6P474 469 aa9.6□□□□□ -0.87
SCFD1-202ENST00000396629 CCDC60Q8IWA6 550 aaPredicted RBP9.6□□□□□ -0.87
SCFD1-202ENST00000396629 KIAA2013Q8IYS2 634 aa9.6□□□□□ -0.87
SCFD1-202ENST00000396629 SIX5Q8N196 739 aa9.6□□□□□ -0.87
SCFD1-202ENST00000396629 VPS52Q8N1B4 723 aa9.6□□□□□ -0.87
SCFD1-202ENST00000396629 KCNG4Q8TDN1 519 aa9.6□□□□□ -0.87
SCFD1-202ENST00000396629 MTA3Q9BTC8 594 aa9.6□□□□□ -0.87
SCFD1-202ENST00000396629 ADAMTS10Q9H324 1103 aa9.6□□□□□ -0.87
SCFD1-202ENST00000396629 KCNK12Q9HB15 430 aa9.6□□□□□ -0.87
SCFD1-202ENST00000396629 ZNF302Q9NR11 478 aa9.6□□□□□ -0.87
SCFD1-202ENST00000396629 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.6□□□□□ -0.87
SCFD1-202ENST00000396629 NT5C1B-RDH14C9J2C7 533 aa9.6□□□□□ -0.87
SCFD1-202ENST00000396629 BACH1O14867 736 aa9.6□□□□□ -0.87
SCFD1-202ENST00000396629 METAP2P50579 478 aaKnown RBP eCLIP9.6□□□□□ -0.87
SCFD1-202ENST00000396629 B4GALNT3Q6L9W6 998 aa9.6□□□□□ -0.87
SCFD1-202ENST00000396629 POTEHQ6S545 545 aa9.6□□□□□ -0.87
SCFD1-202ENST00000396629 NIPA1Q7RTP0 329 aa9.6□□□□□ -0.87
SCFD1-202ENST00000396629 DDX53Q86TM3 631 aaKnown RBP9.6□□□□□ -0.87
SCFD1-202ENST00000396629 TEX2Q8IWB9 1127 aa9.6□□□□□ -0.87
SCFD1-202ENST00000396629 LINC01465Q8N7H1 131 aa9.6□□□□□ -0.87
SCFD1-202ENST00000396629 HELQQ8TDG4 1101 aa9.6□□□□□ -0.87
SCFD1-202ENST00000396629 AUTS2Q8WXX7 1259 aa9.6□□□□□ -0.87
SCFD1-202ENST00000396629 TMEM169Q96HH4 297 aa9.6□□□□□ -0.87
SCFD1-202ENST00000396629 MRPL9Q9BYD2 267 aaKnown RBP9.6□□□□□ -0.87
SCFD1-202ENST00000396629 DLL3Q9NYJ7 618 aa9.6□□□□□ -0.87
SCFD1-202ENST00000396629 IGSF9Q9P2J2 1179 aa9.6□□□□□ -0.87
SCFD1-202ENST00000396629 WNT16Q9UBV4 365 aa9.6□□□□□ -0.87
SCFD1-202ENST00000396629 FBXL21Q9UKT6 434 aa9.6□□□□□ -0.87
SCFD1-202ENST00000396629 A0A0U1RQF3 1178 aa9.59□□□□□ -0.87
SCFD1-202ENST00000396629 CARNS1A5YM72 827 aa9.59□□□□□ -0.87
SCFD1-202ENST00000396629 DHX15O43143 795 aaKnown RBP9.59□□□□□ -0.87
SCFD1-202ENST00000396629 CA8P35219 290 aa9.59□□□□□ -0.87
SCFD1-202ENST00000396629 ALDH7A1P49419 539 aaKnown RBP9.59□□□□□ -0.87
SCFD1-202ENST00000396629 DIEXFQ68CQ4 756 aaKnown RBP9.59□□□□□ -0.87
SCFD1-202ENST00000396629 SWSAP1Q6NVH7 229 aa9.59□□□□□ -0.87
SCFD1-202ENST00000396629 MIS18BP1Q6P0N0 1132 aa9.59□□□□□ -0.87
SCFD1-202ENST00000396629 TMC5Q6UXY8 1006 aa9.59□□□□□ -0.87
SCFD1-202ENST00000396629 CCDC149Q6ZUS6 474 aa9.59□□□□□ -0.87
SCFD1-202ENST00000396629 CABP7Q86V35 215 aa9.59□□□□□ -0.87
SCFD1-202ENST00000396629 PPFIBP1Q86W92 1011 aa9.59□□□□□ -0.87
SCFD1-202ENST00000396629 CMTR1Q8N1G2 835 aaKnown RBP9.59□□□□□ -0.87
SCFD1-202ENST00000396629 ZNF710Q8N1W2 664 aa9.59□□□□□ -0.87
SCFD1-202ENST00000396629 BBXQ8WY36 941 aaPredicted RBP9.59□□□□□ -0.87
SCFD1-202ENST00000396629 SFXN1Q9H9B4 322 aa9.59□□□□□ -0.87
SCFD1-202ENST00000396629 MAFBQ9Y5Q3 323 aaPredicted RBP9.59□□□□□ -0.87
SCFD1-202ENST00000396629 R4GN57 208 aa9.59□□□□□ -0.87
SCFD1-202ENST00000396629 EP300Q09472 2414 aaPredicted RBP9.59□□□□□ -0.87
SCFD1-202ENST00000396629 KMT2BQ9UMN6 2715 aaPredicted RBP9.58□□□□□ -0.88
SCFD1-202ENST00000396629 WDR87Q6ZQQ6 2873 aa9.58□□□□□ -0.88
SCFD1-202ENST00000396629 hCG_1642624A0A1W2PR95 340 aa9.58□□□□□ -0.88
SCFD1-202ENST00000396629 KRBA1A5PL33 1030 aa9.58□□□□□ -0.88
SCFD1-202ENST00000396629 MAGEB2O15479 319 aa9.58□□□□□ -0.88
SCFD1-202ENST00000396629 KRT37O76014 449 aa9.58□□□□□ -0.88
SCFD1-202ENST00000396629 FOSP01100 380 aaPredicted RBP9.58□□□□□ -0.88
SCFD1-202ENST00000396629 EIF4BP23588 611 aaKnown RBP9.58□□□□□ -0.88
SCFD1-202ENST00000396629 NLRP11P59045 1033 aaKnown RBP9.58□□□□□ -0.88
SCFD1-202ENST00000396629 TMEM173Q86WV6 379 aaPredicted RBP9.58□□□□□ -0.88
SCFD1-202ENST00000396629 TMTC2Q8N394 836 aa9.58□□□□□ -0.88
SCFD1-202ENST00000396629 METTL13Q8N6R0 699 aa9.58□□□□□ -0.88
SCFD1-202ENST00000396629 RSPH1Q8WYR4 309 aa9.58□□□□□ -0.88
SCFD1-202ENST00000396629 DDX39AO00148 427 aaKnown RBP9.58□□□□□ -0.88
SCFD1-202ENST00000396629 NARSO43776 548 aaKnown RBP9.58□□□□□ -0.88
SCFD1-202ENST00000396629 CLCN3P51790 818 aa9.58□□□□□ -0.88
SCFD1-202ENST00000396629 C15orf39Q6ZRI6 1047 aa9.58□□□□□ -0.88
SCFD1-202ENST00000396629 TMEM87AQ8NBN3 555 aa9.58□□□□□ -0.88
SCFD1-202ENST00000396629 RNF169Q8NCN4 708 aa9.58□□□□□ -0.88
SCFD1-202ENST00000396629 IGSF21Q96ID5 467 aa9.58□□□□□ -0.88
SCFD1-202ENST00000396629 PGBD1Q96JS3 809 aa9.58□□□□□ -0.88
SCFD1-202ENST00000396629 ANO3Q9BYT9 981 aa9.58□□□□□ -0.88
SCFD1-202ENST00000396629 RWDD1Q9H446 243 aaPredicted RBP9.58□□□□□ -0.88
SCFD1-202ENST00000396629 RIC8AQ9NPQ8 531 aa9.58□□□□□ -0.88
SCFD1-202ENST00000396629 DOCK8Q8NF50 2099 aa9.58□□□□□ -0.88
SCFD1-202ENST00000396629 MTCL1Q9Y4B5 1905 aaKnown RBP9.57□□□□□ -0.88
SCFD1-202ENST00000396629 SH2B2O14492 632 aaPredicted RBP9.57□□□□□ -0.88
SCFD1-202ENST00000396629 CALM1P0DP23 149 aa9.57□□□□□ -0.88
SCFD1-202ENST00000396629 CALM2P0DP24 149 aa9.57□□□□□ -0.88
SCFD1-202ENST00000396629 CALM3P0DP25 149 aa9.57□□□□□ -0.88
SCFD1-202ENST00000396629 DARSP14868 501 aaKnown RBP9.57□□□□□ -0.88
SCFD1-202ENST00000396629 SREBF1P36956 1147 aa9.57□□□□□ -0.88
SCFD1-202ENST00000396629 CLCN4P51793 760 aa9.57□□□□□ -0.88
SCFD1-202ENST00000396629 TBC1D8BQ0IIM8 1120 aa9.57□□□□□ -0.88
SCFD1-202ENST00000396629 PTPN14Q15678 1187 aa9.57□□□□□ -0.88
SCFD1-202ENST00000396629 LETM2Q2VYF4 491 aa9.57□□□□□ -0.88
SCFD1-202ENST00000396629 EFCAB12Q6NXP0 572 aa9.57□□□□□ -0.88
SCFD1-202ENST00000396629 TMTC3Q6ZXV5 915 aa9.57□□□□□ -0.88
SCFD1-202ENST00000396629 HEATR3Q7Z4Q2 680 aa9.57□□□□□ -0.88
SCFD1-202ENST00000396629 CKAP2LQ8IYA6 745 aa9.57□□□□□ -0.88
SCFD1-202ENST00000396629 CMASQ8NFW8 434 aaPredicted RBP9.57□□□□□ -0.88
SCFD1-202ENST00000396629 BCL7CQ8WUZ0 217 aaPredicted RBP9.57□□□□□ -0.88
SCFD1-202ENST00000396629 RUBCNQ92622 972 aa9.57□□□□□ -0.88
SCFD1-202ENST00000396629 KLHL5Q96PQ7 755 aa9.57□□□□□ -0.88
SCFD1-202ENST00000396629 NRDE2Q9H7Z3 1164 aa9.57□□□□□ -0.88
SCFD1-202ENST00000396629 DLGAP2Q9P1A6 1054 aa9.57□□□□□ -0.88
SCFD1-202ENST00000396629 CEP131Q9UPN4 1083 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms