RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 WDR64B1ANS9 1081 aa19.81■□□□□ 0.76
EXOSC3-202ENST00000396521 CIITAP33076 1130 aa19.81■□□□□ 0.76
EXOSC3-202ENST00000396521 NLRP11P59045 1033 aaKnown RBP19.81■□□□□ 0.76
EXOSC3-202ENST00000396521 SMC1AQ14683 1233 aaKnown RBP19.81■□□□□ 0.76
EXOSC3-202ENST00000396521 JAKMIP3Q5VZ66 844 aa19.81■□□□□ 0.76
EXOSC3-202ENST00000396521 EFCAB12Q6NXP0 572 aa19.81■□□□□ 0.76
EXOSC3-202ENST00000396521 SYCE2Q6PIF2 218 aa19.81■□□□□ 0.76
EXOSC3-202ENST00000396521 BRPF3Q9ULD4 1205 aa19.81■□□□□ 0.76
EXOSC3-202ENST00000396521 AKT3Q9Y243 479 aa19.81■□□□□ 0.76
EXOSC3-202ENST00000396521 A0A0U1RQF3 1178 aa19.8■□□□□ 0.76
EXOSC3-202ENST00000396521 ALDH7A1P49419 539 aaKnown RBP19.8■□□□□ 0.76
EXOSC3-202ENST00000396521 GIT2Q14161 759 aa19.8■□□□□ 0.76
EXOSC3-202ENST00000396521 ECHDC2Q86YB7 292 aa19.8■□□□□ 0.76
EXOSC3-202ENST00000396521 RIPOR3Q96MK2 946 aa19.8■□□□□ 0.76
EXOSC3-202ENST00000396521 ADAM7Q9H2U9 754 aa19.8■□□□□ 0.76
EXOSC3-202ENST00000396521 ADAMTS10Q9H324 1103 aa19.8■□□□□ 0.76
EXOSC3-202ENST00000396521 CHST12Q9NRB3 414 aa19.8■□□□□ 0.76
EXOSC3-202ENST00000396521 GABBR1Q9UBS5 961 aa19.8■□□□□ 0.76
EXOSC3-202ENST00000396521 SAMM50Q9Y512 469 aa19.8■□□□□ 0.76
EXOSC3-202ENST00000396521 KLF18A0A0U1RQI7 1052 aa19.79■□□□□ 0.76
EXOSC3-202ENST00000396521 HIDE1A8MVS5 230 aa19.79■□□□□ 0.76
EXOSC3-202ENST00000396521 MTHFRP42898 656 aa19.79■□□□□ 0.76
EXOSC3-202ENST00000396521 RBM10P98175 930 aaKnown RBP19.79■□□□□ 0.76
EXOSC3-202ENST00000396521 LRRC55Q6ZSA7 311 aa19.79■□□□□ 0.76
EXOSC3-202ENST00000396521 LINC01465Q8N7H1 131 aa19.79■□□□□ 0.76
EXOSC3-202ENST00000396521 RIT2Q99578 217 aa19.79■□□□□ 0.76
EXOSC3-202ENST00000396521 FAM217BQ9NTX9 383 aaPredicted RBP19.79■□□□□ 0.76
EXOSC3-202ENST00000396521 STK39Q9UEW8 545 aa19.79■□□□□ 0.76
EXOSC3-202ENST00000396521 SORCS3Q9UPU3 1222 aa19.79■□□□□ 0.76
EXOSC3-202ENST00000396521 SKIP12755 728 aa19.78■□□□□ 0.76
EXOSC3-202ENST00000396521 DARSP14868 501 aaKnown RBP19.78■□□□□ 0.76
EXOSC3-202ENST00000396521 SFNP31947 248 aa19.78■□□□□ 0.76
EXOSC3-202ENST00000396521 CLCN3P51790 818 aa19.78■□□□□ 0.76
EXOSC3-202ENST00000396521 FGD1P98174 961 aa19.78■□□□□ 0.76
EXOSC3-202ENST00000396521 APOBRQ0VD83 1088 aa19.78■□□□□ 0.76
EXOSC3-202ENST00000396521 MTMR3Q13615 1198 aa19.78■□□□□ 0.76
EXOSC3-202ENST00000396521 PRR16Q569H4 304 aa19.78■□□□□ 0.76
EXOSC3-202ENST00000396521 BMP2KLQ5H9B9 411 aa19.78■□□□□ 0.76
EXOSC3-202ENST00000396521 SLC39A11Q8N1S5 342 aa19.78■□□□□ 0.76
EXOSC3-202ENST00000396521 TRAIPQ9BWF2 469 aa19.78■□□□□ 0.76
EXOSC3-202ENST00000396521 DZANK1Q9NVP4 752 aa19.78■□□□□ 0.76
EXOSC3-202ENST00000396521 HCSTQ9UBK5 93 aa19.78■□□□□ 0.76
EXOSC3-202ENST00000396521 KIAA1671Q9BY89 1806 aa19.77■□□□□ 0.76
EXOSC3-202ENST00000396521 ZFHX2Q9C0A1 2572 aaPredicted RBP19.77■□□□□ 0.76
EXOSC3-202ENST00000396521 OATP04181 439 aa19.77■□□□□ 0.76
EXOSC3-202ENST00000396521 CDC27P30260 824 aa19.77■□□□□ 0.76
EXOSC3-202ENST00000396521 METAP2P50579 478 aaKnown RBP eCLIP19.77■□□□□ 0.76
EXOSC3-202ENST00000396521 USP11P51784 963 aa19.77■□□□□ 0.76
EXOSC3-202ENST00000396521 POLGP54098 1239 aaPredicted RBP19.77■□□□□ 0.76
EXOSC3-202ENST00000396521 AKAP17AQ02040 695 aaKnown RBP19.77■□□□□ 0.76
EXOSC3-202ENST00000396521 LLGL2Q6P1M3 1020 aa19.77■□□□□ 0.76
EXOSC3-202ENST00000396521 TMEM87AQ8NBN3 555 aa19.77■□□□□ 0.76
EXOSC3-202ENST00000396521 KREMEN2Q8NCW0 462 aa19.77■□□□□ 0.76
EXOSC3-202ENST00000396521 CCDC148Q8NFR7 591 aa19.77■□□□□ 0.76
EXOSC3-202ENST00000396521 RDM1Q8NG50 284 aa19.77■□□□□ 0.76
EXOSC3-202ENST00000396521 TMEM169Q96HH4 297 aa19.77■□□□□ 0.76
EXOSC3-202ENST00000396521 SCLT1Q96NL6 688 aa19.77■□□□□ 0.76
EXOSC3-202ENST00000396521 PPP1R16BQ96T49 567 aa19.77■□□□□ 0.76
EXOSC3-202ENST00000396521 DISC1Q9NRI5 854 aa19.77■□□□□ 0.76
EXOSC3-202ENST00000396521 RNF19AQ9NV58 838 aa19.77■□□□□ 0.76
EXOSC3-202ENST00000396521 USTQ9Y2C2 406 aa19.77■□□□□ 0.76
EXOSC3-202ENST00000396521 HCFC2Q9Y5Z7 792 aa19.77■□□□□ 0.76
EXOSC3-202ENST00000396521 IRAK3Q9Y616 596 aa19.77■□□□□ 0.76
EXOSC3-202ENST00000396521 FNDC1Q4ZHG4 1894 aaPredicted RBP19.76■□□□□ 0.75
EXOSC3-202ENST00000396521 C2orf71A6NGG8 1288 aa19.76■□□□□ 0.75
EXOSC3-202ENST00000396521 PRPF3O43395 683 aaKnown RBP19.76■□□□□ 0.75
EXOSC3-202ENST00000396521 GPC3P51654 580 aa19.76■□□□□ 0.75
EXOSC3-202ENST00000396521 JAK3P52333 1124 aa19.76■□□□□ 0.75
EXOSC3-202ENST00000396521 TBC1D8BQ0IIM8 1120 aa19.76■□□□□ 0.75
EXOSC3-202ENST00000396521 TRMT1LQ7Z2T5 733 aaKnown RBP19.76■□□□□ 0.75
EXOSC3-202ENST00000396521 ZNF598Q86UK7 904 aaKnown RBP19.76■□□□□ 0.75
EXOSC3-202ENST00000396521 PLCD3Q8N3E9 789 aa19.76■□□□□ 0.75
EXOSC3-202ENST00000396521 ATOH1Q92858 354 aaPredicted RBP19.76■□□□□ 0.75
EXOSC3-202ENST00000396521 PHOX2BQ99453 314 aa19.76■□□□□ 0.75
EXOSC3-202ENST00000396521 GCOM2Q9BZD3 368 aaPredicted RBP19.76■□□□□ 0.75
EXOSC3-202ENST00000396521 C22orf23Q9BZE7 217 aa19.76■□□□□ 0.75
EXOSC3-202ENST00000396521 INO80BQ9C086 356 aaPredicted RBP19.76■□□□□ 0.75
EXOSC3-202ENST00000396521 PLXNA4Q9HCM2 1894 aa19.75■□□□□ 0.75
EXOSC3-202ENST00000396521 PROB1E7EW31 1015 aa19.75■□□□□ 0.75
EXOSC3-202ENST00000396521 GFRA3O60609 400 aa19.75■□□□□ 0.75
EXOSC3-202ENST00000396521 ADD1P35611 737 aaKnown RBP19.75■□□□□ 0.75
EXOSC3-202ENST00000396521 DNM2P50570 870 aa19.75■□□□□ 0.75
EXOSC3-202ENST00000396521 VCPP55072 806 aaKnown RBP19.75■□□□□ 0.75
EXOSC3-202ENST00000396521 CLLU1OSQ5K130 101 aa19.75■□□□□ 0.75
EXOSC3-202ENST00000396521 ATAT1Q5SQI0 421 aa19.75■□□□□ 0.75
EXOSC3-202ENST00000396521 ZDHHC14Q8IZN3 488 aa19.75■□□□□ 0.75
EXOSC3-202ENST00000396521 RNF169Q8NCN4 708 aa19.75■□□□□ 0.75
EXOSC3-202ENST00000396521 NLRP7Q8WX94 980 aa19.75■□□□□ 0.75
EXOSC3-202ENST00000396521 NAP1L2Q9ULW6 460 aaPredicted RBP19.75■□□□□ 0.75
EXOSC3-202ENST00000396521 GALR2O43603 387 aaPredicted RBP19.74■□□□□ 0.75
EXOSC3-202ENST00000396521 GAS7O60861 476 aa19.74■□□□□ 0.75
EXOSC3-202ENST00000396521 CLASP2O75122 1294 aaKnown RBP19.74■□□□□ 0.75
EXOSC3-202ENST00000396521 CXCL14O95715 111 aa19.74■□□□□ 0.75
EXOSC3-202ENST00000396521 PRKCEQ02156 737 aa19.74■□□□□ 0.75
EXOSC3-202ENST00000396521 PPFIBP1Q86W92 1011 aa19.74■□□□□ 0.75
EXOSC3-202ENST00000396521 FBXL16Q8N461 479 aa19.74■□□□□ 0.75
EXOSC3-202ENST00000396521 LRRC71Q8N4P6 559 aa19.74■□□□□ 0.75
EXOSC3-202ENST00000396521 TCEANC2Q96MN5 208 aa19.74■□□□□ 0.75
EXOSC3-202ENST00000396521 TSHZ2Q9NRE2 1034 aa19.74■□□□□ 0.75
EXOSC3-202ENST00000396521 LOXHD1Q8IVV2 1947 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms