RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 INTS2Q9H0H0 1204 aaKnown RBP12.58□□□□□ -0.4
PDXDC1-202ENST00000396410 GANQ9H2C0 597 aa12.58□□□□□ -0.4
PDXDC1-202ENST00000396410 AGPAT3Q9NRZ7 376 aa12.58□□□□□ -0.4
PDXDC1-202ENST00000396410 RBM12Q9NTZ6 932 aaKnown RBP12.58□□□□□ -0.4
PDXDC1-202ENST00000396410 GOLGA6AQ9NYA3 693 aa12.58□□□□□ -0.4
PDXDC1-202ENST00000396410 GUCY2FP51841 1108 aa12.58□□□□□ -0.4
PDXDC1-202ENST00000396410 SPP2Q13103 211 aa12.58□□□□□ -0.4
PDXDC1-202ENST00000396410 FKBP1CQ5VVH2 108 aa12.58□□□□□ -0.4
PDXDC1-202ENST00000396410 CCDC127Q96BQ5 260 aa12.58□□□□□ -0.4
PDXDC1-202ENST00000396410 UBE2TQ9NPD8 197 aaPredicted RBP12.58□□□□□ -0.4
PDXDC1-202ENST00000396410 MUTP22033 750 aa12.57□□□□□ -0.4
PDXDC1-202ENST00000396410 PRKG1Q13976 671 aa12.57□□□□□ -0.4
PDXDC1-202ENST00000396410 OTUD6AQ7L8S5 288 aa12.57□□□□□ -0.4
PDXDC1-202ENST00000396410 RPAP3Q9H6T3 665 aaPredicted RBP12.57□□□□□ -0.4
PDXDC1-202ENST00000396410 CTTNBP2NLQ9P2B4 639 aa12.57□□□□□ -0.4
PDXDC1-202ENST00000396410 PNMA2Q9UL42 364 aa12.57□□□□□ -0.4
PDXDC1-202ENST00000396410 UBE4BO95155 1302 aa12.57□□□□□ -0.4
PDXDC1-202ENST00000396410 GOLGA6L10A0A0M3HER8 536 aa12.57□□□□□ -0.4
PDXDC1-202ENST00000396410 KRIT1O00522 736 aa12.57□□□□□ -0.4
PDXDC1-202ENST00000396410 SOX5P35711 763 aa12.57□□□□□ -0.4
PDXDC1-202ENST00000396410 ALCAMQ13740 583 aa12.57□□□□□ -0.4
PDXDC1-202ENST00000396410 INTS8Q75QN2 995 aaKnown RBP12.57□□□□□ -0.4
PDXDC1-202ENST00000396410 GLYCTKQ8IVS8 523 aa12.57□□□□□ -0.4
PDXDC1-202ENST00000396410 MKNK1Q9BUB5 465 aa12.57□□□□□ -0.4
PDXDC1-202ENST00000396410 TLR10Q9BXR5 811 aa12.57□□□□□ -0.4
PDXDC1-202ENST00000396410 BCAS3Q9H6U6 928 aa12.57□□□□□ -0.4
PDXDC1-202ENST00000396410 ZBTB7AO95365 584 aa12.57□□□□□ -0.4
PDXDC1-202ENST00000396410 YWHABP31946 246 aaKnown RBP12.57□□□□□ -0.4
PDXDC1-202ENST00000396410 CYP2C19P33261 490 aa12.57□□□□□ -0.4
PDXDC1-202ENST00000396410 DMP1Q13316 513 aaPredicted RBP12.57□□□□□ -0.4
PDXDC1-202ENST00000396410 DNAJC21Q5F1R6 531 aaKnown RBP12.57□□□□□ -0.4
PDXDC1-202ENST00000396410 DNAAF5Q86Y56 855 aa12.57□□□□□ -0.4
PDXDC1-202ENST00000396410 CRYGNQ8WXF5 182 aa12.57□□□□□ -0.4
PDXDC1-202ENST00000396410 IKZF4Q9H2S9 585 aa12.57□□□□□ -0.4
PDXDC1-202ENST00000396410 TMOD4Q9NZQ9 345 aa12.57□□□□□ -0.4
PDXDC1-202ENST00000396410 NAGPAQ9UK23 515 aa12.57□□□□□ -0.4
PDXDC1-202ENST00000396410 MYH7BA7E2Y1 1941 aa12.57□□□□□ -0.4
PDXDC1-202ENST00000396410 FRMPD4Q14CM0 1322 aa12.56□□□□□ -0.4
PDXDC1-202ENST00000396410 GOLGA8IPA6NC78 632 aa12.56□□□□□ -0.4
PDXDC1-202ENST00000396410 GOLGA8JA6NMD2 632 aa12.56□□□□□ -0.4
PDXDC1-202ENST00000396410 SLC16A4O15374 487 aa12.56□□□□□ -0.4
PDXDC1-202ENST00000396410 TBC1D12O60347 775 aa12.56□□□□□ -0.4
PDXDC1-202ENST00000396410 EVI5O60447 810 aa12.56□□□□□ -0.4
PDXDC1-202ENST00000396410 GLE1Q53GS7 698 aaKnown RBP12.56□□□□□ -0.4
PDXDC1-202ENST00000396410 PBKQ96KB5 322 aa12.56□□□□□ -0.4
PDXDC1-202ENST00000396410 TAAR1Q96RJ0 339 aa12.56□□□□□ -0.4
PDXDC1-202ENST00000396410 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.56□□□□□ -0.4
PDXDC1-202ENST00000396410 ADAMTSL1Q8N6G6 1762 aa12.56□□□□□ -0.4
PDXDC1-202ENST00000396410 GGCXP38435 758 aa12.56□□□□□ -0.4
PDXDC1-202ENST00000396410 GCLMP48507 274 aa12.56□□□□□ -0.4
PDXDC1-202ENST00000396410 PDE4CQ08493 712 aa12.56□□□□□ -0.4
PDXDC1-202ENST00000396410 BMT2Q1RMZ1 405 aa12.56□□□□□ -0.4
PDXDC1-202ENST00000396410 TKFCQ3LXA3 575 aa12.56□□□□□ -0.4
PDXDC1-202ENST00000396410 EPM2AIP1Q7L775 607 aaPredicted RBP12.56□□□□□ -0.4
PDXDC1-202ENST00000396410 PPM1KQ8N3J5 372 aa12.56□□□□□ -0.4
PDXDC1-202ENST00000396410 GOLPH3Q9H4A6 298 aa12.56□□□□□ -0.4
PDXDC1-202ENST00000396410 VIPAS39Q9H9C1 493 aa12.56□□□□□ -0.4
PDXDC1-202ENST00000396410 WDR64B1ANS9 1081 aa12.56□□□□□ -0.4
PDXDC1-202ENST00000396410 RPS6P62753 249 aaKnown RBP12.56□□□□□ -0.4
PDXDC1-202ENST00000396410 BFSP1Q12934 665 aa12.56□□□□□ -0.4
PDXDC1-202ENST00000396410 PPP2R5AQ15172 486 aa12.56□□□□□ -0.4
PDXDC1-202ENST00000396410 DEFB132Q7Z7B7 95 aa12.56□□□□□ -0.4
PDXDC1-202ENST00000396410 XXYLT1Q8NBI6 393 aa12.56□□□□□ -0.4
PDXDC1-202ENST00000396410 CCDC26Q8TAB7 109 aa12.56□□□□□ -0.4
PDXDC1-202ENST00000396410 STK33Q9BYT3 514 aa12.56□□□□□ -0.4
PDXDC1-202ENST00000396410 SALL4Q9UJQ4 1053 aa12.56□□□□□ -0.4
PDXDC1-202ENST00000396410 ZHX2Q9Y6X8 837 aa12.56□□□□□ -0.4
PDXDC1-202ENST00000396410 DKC1O60832 514 aaKnown RBP eCLIP12.56□□□□□ -0.4
PDXDC1-202ENST00000396410 JAK3P52333 1124 aa12.56□□□□□ -0.4
PDXDC1-202ENST00000396410 ZSCAN26Q16670 478 aa12.56□□□□□ -0.4
PDXDC1-202ENST00000396410 HAUS6Q7Z4H7 955 aa12.56□□□□□ -0.4
PDXDC1-202ENST00000396410 AP1M1Q9BXS5 423 aa12.56□□□□□ -0.4
PDXDC1-202ENST00000396410 RNF146Q9NTX7 359 aa12.56□□□□□ -0.4
PDXDC1-202ENST00000396410 HPCAL4Q9UM19 191 aa12.56□□□□□ -0.4
PDXDC1-202ENST00000396410 LRRC37AA6NMS7 1700 aa12.55□□□□□ -0.4
PDXDC1-202ENST00000396410 EMSYQ7Z589 1322 aa12.55□□□□□ -0.4
PDXDC1-202ENST00000396410 ESYT3A0FGR9 886 aa12.55□□□□□ -0.4
PDXDC1-202ENST00000396410 GRID2IPA4D2P6 1211 aa12.55□□□□□ -0.4
PDXDC1-202ENST00000396410 PGRMC1O00264 195 aaKnown RBP12.55□□□□□ -0.4
PDXDC1-202ENST00000396410 TGFB1I1O43294 461 aa12.55□□□□□ -0.4
PDXDC1-202ENST00000396410 CCND2P30279 289 aa12.55□□□□□ -0.4
PDXDC1-202ENST00000396410 VAMP7P51809 220 aa12.55□□□□□ -0.4
PDXDC1-202ENST00000396410 CEP170P1Q96L14 293 aa12.55□□□□□ -0.4
PDXDC1-202ENST00000396410 IFT74Q96LB3 600 aa12.55□□□□□ -0.4
PDXDC1-202ENST00000396410 APEX2Q9UBZ4 518 aa12.55□□□□□ -0.4
PDXDC1-202ENST00000396410 DMGDHQ9UI17 866 aaKnown RBP12.55□□□□□ -0.4
PDXDC1-202ENST00000396410 NFU1Q9UMS0 254 aa12.55□□□□□ -0.4
PDXDC1-202ENST00000396410 ANKRD31Q8N7Z5 1873 aa12.55□□□□□ -0.4
PDXDC1-202ENST00000396410 GUCY2CP25092 1073 aa12.55□□□□□ -0.4
PDXDC1-202ENST00000396410 EMBQ6PCB8 327 aa12.55□□□□□ -0.4
PDXDC1-202ENST00000396410 MICALL2Q8IY33 904 aa12.55□□□□□ -0.4
PDXDC1-202ENST00000396410 PDGFDQ9GZP0 370 aaPredicted RBP12.55□□□□□ -0.4
PDXDC1-202ENST00000396410 KMT5AQ9NQR1 393 aa12.55□□□□□ -0.4
PDXDC1-202ENST00000396410 SLX4Q8IY92 1834 aa12.55□□□□□ -0.4
PDXDC1-202ENST00000396410 RBAK-RBAKDNI3L0D1 243 aa12.55□□□□□ -0.4
PDXDC1-202ENST00000396410 MXI1P50539 228 aa12.55□□□□□ -0.4
PDXDC1-202ENST00000396410 PSMC5P62195 406 aa12.55□□□□□ -0.4
PDXDC1-202ENST00000396410 ASTE1Q2TB18 679 aaPredicted RBP12.55□□□□□ -0.4
PDXDC1-202ENST00000396410 SAMD7Q7Z3H4 446 aa12.55□□□□□ -0.4
PDXDC1-202ENST00000396410 HDAC7Q8WUI4 952 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms