RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 ZBTB42B2RXF5 422 aa18.41■□□□□ 0.54
DDR1-229ENST00000396342 MBTPS2O43462 519 aa18.41■□□□□ 0.54
DDR1-229ENST00000396342 GPR32O75388 356 aa18.41■□□□□ 0.54
DDR1-229ENST00000396342 GATMP50440 423 aa18.41■□□□□ 0.54
DDR1-229ENST00000396342 ANKRD1Q15327 319 aa18.41■□□□□ 0.54
DDR1-229ENST00000396342 MTERF2Q49AM1 385 aa18.41■□□□□ 0.54
DDR1-229ENST00000396342 FAM102BQ5T8I3 360 aa18.41■□□□□ 0.54
DDR1-229ENST00000396342 MOXD1Q6UVY6 613 aa18.41■□□□□ 0.54
DDR1-229ENST00000396342 CRIPAKQ8N1N5 446 aa18.41■□□□□ 0.54
DDR1-229ENST00000396342 UNC45AQ9H3U1 944 aa18.41■□□□□ 0.54
DDR1-229ENST00000396342 NGRNQ9NPE2 291 aaKnown RBP18.41■□□□□ 0.54
DDR1-229ENST00000396342 CD320Q9NPF0 282 aa18.41■□□□□ 0.54
DDR1-229ENST00000396342 CHST12Q9NRB3 414 aa18.41■□□□□ 0.54
DDR1-229ENST00000396342 RAPGEFL1Q9UHV5 662 aa18.41■□□□□ 0.54
DDR1-229ENST00000396342 LZTS1Q9Y250 596 aa18.41■□□□□ 0.54
DDR1-229ENST00000396342 DOCK5Q9H7D0 1870 aa18.41■□□□□ 0.54
DDR1-229ENST00000396342 TRANK1O15050 2925 aa18.4■□□□□ 0.54
DDR1-229ENST00000396342 MGEA5O60502 916 aa18.4■□□□□ 0.54
DDR1-229ENST00000396342 BAG4O95429 457 aaKnown RBP18.4■□□□□ 0.54
DDR1-229ENST00000396342 EOMESO95936 686 aa18.4■□□□□ 0.54
DDR1-229ENST00000396342 LINC00271P0C7V0 271 aa18.4■□□□□ 0.54
DDR1-229ENST00000396342 FGFR1P11362 822 aa18.4■□□□□ 0.54
DDR1-229ENST00000396342 DARSP14868 501 aaKnown RBP18.4■□□□□ 0.54
DDR1-229ENST00000396342 GCFC2P16383 781 aaKnown RBP18.4■□□□□ 0.54
DDR1-229ENST00000396342 ALDH7A1P49419 539 aaKnown RBP18.4■□□□□ 0.54
DDR1-229ENST00000396342 FAM189BP81408 668 aa18.4■□□□□ 0.54
DDR1-229ENST00000396342 MFSD14AQ96MC6 490 aa18.4■□□□□ 0.54
DDR1-229ENST00000396342 SPG21Q9NZD8 308 aa18.4■□□□□ 0.54
DDR1-229ENST00000396342 RBAK-RBAKDNI3L0D1 243 aa18.39■□□□□ 0.53
DDR1-229ENST00000396342 LTBRP36941 435 aa18.39■□□□□ 0.53
DDR1-229ENST00000396342 GPC3P51654 580 aa18.39■□□□□ 0.53
DDR1-229ENST00000396342 PSMC5P62195 406 aa18.39■□□□□ 0.53
DDR1-229ENST00000396342 LETM2Q2VYF4 491 aa18.39■□□□□ 0.53
DDR1-229ENST00000396342 TMC7Q7Z402 723 aa18.39■□□□□ 0.53
DDR1-229ENST00000396342 DAGLBQ8NCG7 672 aa18.39■□□□□ 0.53
DDR1-229ENST00000396342 SLC7A3Q8WY07 619 aa18.39■□□□□ 0.53
DDR1-229ENST00000396342 MRPS27Q92552 414 aaKnown RBP18.39■□□□□ 0.53
DDR1-229ENST00000396342 LENG9Q96B70 501 aa18.39■□□□□ 0.53
DDR1-229ENST00000396342 CYP3A7-CYP3A51PA0A087WV96 503 aa18.38■□□□□ 0.53
DDR1-229ENST00000396342 LINC01565O15544 149 aa18.38■□□□□ 0.53
DDR1-229ENST00000396342 TBX10O75333 385 aa18.38■□□□□ 0.53
DDR1-229ENST00000396342 CYP3A7P24462 503 aa18.38■□□□□ 0.53
DDR1-229ENST00000396342 GTF2F1P35269 517 aaKnown RBP eCLIP18.38■□□□□ 0.538e-7■■■■□ 24.7
DDR1-229ENST00000396342 IRS1P35568 1242 aa18.38■□□□□ 0.53
DDR1-229ENST00000396342 NCBP1Q09161 790 aaKnown RBP18.38■□□□□ 0.53
DDR1-229ENST00000396342 COASYQ13057 564 aa18.38■□□□□ 0.53
DDR1-229ENST00000396342 TWF2Q6IBS0 349 aaKnown RBP18.38■□□□□ 0.53
DDR1-229ENST00000396342 KCNT2Q6UVM3 1135 aa18.38■□□□□ 0.53
DDR1-229ENST00000396342 OTUD6AQ7L8S5 288 aa18.38■□□□□ 0.53
DDR1-229ENST00000396342 ZNF410Q86VK4 478 aa18.38■□□□□ 0.53
DDR1-229ENST00000396342 ECHDC2Q86YB7 292 aa18.38■□□□□ 0.53
DDR1-229ENST00000396342 FAM20AQ96MK3 541 aa18.38■□□□□ 0.53
DDR1-229ENST00000396342 CCDC43Q96MW1 224 aaKnown RBP18.38■□□□□ 0.53
DDR1-229ENST00000396342 TCF25Q9BQ70 676 aa18.38■□□□□ 0.53
DDR1-229ENST00000396342 NIFKQ9BYG3 293 aaKnown RBP18.38■□□□□ 0.53
DDR1-229ENST00000396342 ADAMTS10Q9H324 1103 aa18.38■□□□□ 0.53
DDR1-229ENST00000396342 SUCLA2Q9P2R7 463 aaPredicted RBP18.38■□□□□ 0.53
DDR1-229ENST00000396342 C19orf67A6NJJ6 358 aa18.37■□□□□ 0.53
DDR1-229ENST00000396342 ZNF862O60290 1169 aa18.37■□□□□ 0.53
DDR1-229ENST00000396342 PSMD10O75832 226 aa18.37■□□□□ 0.53
DDR1-229ENST00000396342 EYA4O95677 639 aa18.37■□□□□ 0.53
DDR1-229ENST00000396342 DNAJB1P25685 340 aa18.37■□□□□ 0.53
DDR1-229ENST00000396342 RAB27AP51159 221 aa18.37■□□□□ 0.53
DDR1-229ENST00000396342 PLCB3Q01970 1234 aa18.37■□□□□ 0.53
DDR1-229ENST00000396342 RNASELQ05823 741 aaKnown RBP18.37■□□□□ 0.53
DDR1-229ENST00000396342 DLX2Q07687 328 aaPredicted RBP18.37■□□□□ 0.53
DDR1-229ENST00000396342 TOB2Q14106 344 aaPredicted RBP18.37■□□□□ 0.53
DDR1-229ENST00000396342 DSC3Q14574 896 aa18.37■□□□□ 0.53
DDR1-229ENST00000396342 TPRNQ4KMQ1 711 aa18.37■□□□□ 0.53
DDR1-229ENST00000396342 PLPP4Q5VZY2 271 aa18.37■□□□□ 0.53
DDR1-229ENST00000396342 GLB1LQ6UWU2 654 aa18.37■□□□□ 0.53
DDR1-229ENST00000396342 CATSPER4Q7RTX7 472 aa18.37■□□□□ 0.53
DDR1-229ENST00000396342 ZBTB33Q86T24 672 aa18.37■□□□□ 0.53
DDR1-229ENST00000396342 RHPN2Q8IUC4 686 aa18.37■□□□□ 0.53
DDR1-229ENST00000396342 KHSRPQ92945 711 aaKnown RBP eCLIP18.37■□□□□ 0.53
DDR1-229ENST00000396342 PGBD4Q96DM1 585 aa18.37■□□□□ 0.53
DDR1-229ENST00000396342 TMEM169Q96HH4 297 aa18.37■□□□□ 0.53
DDR1-229ENST00000396342 PPME1Q9Y570 386 aa18.37■□□□□ 0.53
DDR1-229ENST00000396342 TTC3P53804 2025 aa18.37■□□□□ 0.53
DDR1-229ENST00000396342 A0A0U1RQF3 1178 aa18.36■□□□□ 0.53
DDR1-229ENST00000396342 SPDYE4A6NLX3 237 aa18.36■□□□□ 0.53
DDR1-229ENST00000396342 PER2O15055 1255 aa18.36■□□□□ 0.53
DDR1-229ENST00000396342 TDP2O95551 362 aa18.36■□□□□ 0.53
DDR1-229ENST00000396342 QARSP47897 775 aaKnown RBP18.36■□□□□ 0.53
DDR1-229ENST00000396342 POLGP54098 1239 aaPredicted RBP18.36■□□□□ 0.53
DDR1-229ENST00000396342 CAMK1Q14012 370 aa18.36■□□□□ 0.53
DDR1-229ENST00000396342 SMC1AQ14683 1233 aaKnown RBP18.36■□□□□ 0.53
DDR1-229ENST00000396342 INF2Q27J81 1249 aa18.36■□□□□ 0.53
DDR1-229ENST00000396342 ADGRD2Q7Z7M1 963 aa18.36■□□□□ 0.53
DDR1-229ENST00000396342 NEK8Q86SG6 692 aa18.36■□□□□ 0.53
DDR1-229ENST00000396342 SMRP1Q8NCR6 262 aa18.36■□□□□ 0.53
DDR1-229ENST00000396342 ZNF668Q96K58 619 aaPredicted RBP18.36■□□□□ 0.53
DDR1-229ENST00000396342 STK39Q9UEW8 545 aa18.36■□□□□ 0.53
DDR1-229ENST00000396342 BARX2Q9UMQ3 279 aaPredicted RBP18.36■□□□□ 0.53
DDR1-229ENST00000396342 PIN4Q9Y237 131 aaKnown RBP18.36■□□□□ 0.53
DDR1-229ENST00000396342 RALGAPA2Q2PPJ7 1873 aa18.35■□□□□ 0.53
DDR1-229ENST00000396342 CCNT1O60563 726 aaKnown RBP18.35■□□□□ 0.53
DDR1-229ENST00000396342 HOXB8P17481 243 aaPredicted RBP18.35■□□□□ 0.53
DDR1-229ENST00000396342 TRIM29Q14134 588 aa18.35■□□□□ 0.53
DDR1-229ENST00000396342 UGCGQ16739 394 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms