RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 ATP6V0A1Q93050 837 aa13.29□□□□□ -0.28
ITGB1-202ENST00000396033 CLMNQ96JQ2 1002 aa13.29□□□□□ -0.28
ITGB1-202ENST00000396033 TMEM206Q9H813 350 aa13.29□□□□□ -0.28
ITGB1-202ENST00000396033 BTBD7Q9P203 1132 aa13.29□□□□□ -0.28
ITGB1-202ENST00000396033 SLC9A2Q9UBY0 812 aa13.29□□□□□ -0.28
ITGB1-202ENST00000396033 NFASCO94856 1347 aa13.29□□□□□ -0.28
ITGB1-202ENST00000396033 TLR2O60603 784 aa13.28□□□□□ -0.28
ITGB1-202ENST00000396033 PSAPP07602 524 aa13.28□□□□□ -0.28
ITGB1-202ENST00000396033 PON1P27169 355 aa13.28□□□□□ -0.28
ITGB1-202ENST00000396033 ANO5Q75V66 913 aa13.28□□□□□ -0.28
ITGB1-202ENST00000396033 CDCA5Q96FF9 252 aa13.28□□□□□ -0.28
ITGB1-202ENST00000396033 ACCSQ96QU6 501 aa13.28□□□□□ -0.28
ITGB1-202ENST00000396033 DMAC2Q9NW81 257 aa13.28□□□□□ -0.28
ITGB1-202ENST00000396033 LCTP09848 1927 aa13.28□□□□□ -0.28
ITGB1-202ENST00000396033 MACROD2A1Z1Q3 448 aa13.28□□□□□ -0.28
ITGB1-202ENST00000396033 EXOC3O60645 756 aa13.28□□□□□ -0.28
ITGB1-202ENST00000396033 LCA5LO95447 670 aa13.28□□□□□ -0.28
ITGB1-202ENST00000396033 PEX3P56589 373 aa13.28□□□□□ -0.28
ITGB1-202ENST00000396033 CNTN2Q02246 1040 aa13.28□□□□□ -0.28
ITGB1-202ENST00000396033 ARID5AQ03989 594 aa13.28□□□□□ -0.28
ITGB1-202ENST00000396033 PPATQ06203 517 aa13.28□□□□□ -0.28
ITGB1-202ENST00000396033 TUBB2AQ13885 445 aa13.28□□□□□ -0.28
ITGB1-202ENST00000396033 ASIC2Q16515 512 aa13.28□□□□□ -0.28
ITGB1-202ENST00000396033 ZNF771Q7L3S4 317 aaPredicted RBP13.28□□□□□ -0.28
ITGB1-202ENST00000396033 FAM133AQ8N9E0 248 aa13.28□□□□□ -0.28
ITGB1-202ENST00000396033 PROCA1Q8NCQ7 364 aaPredicted RBP13.28□□□□□ -0.28
ITGB1-202ENST00000396033 IWS1Q96ST2 819 aa13.28□□□□□ -0.28
ITGB1-202ENST00000396033 TUBB2BQ9BVA1 445 aa13.28□□□□□ -0.28
ITGB1-202ENST00000396033 FBXO40Q9UH90 709 aa13.28□□□□□ -0.28
ITGB1-202ENST00000396033 PFASO15067 1338 aa13.28□□□□□ -0.28
ITGB1-202ENST00000396033 A0A0G2JMZ2 1700 aa13.28□□□□□ -0.28
ITGB1-202ENST00000396033 A0A0G2JLL6 359 aaPredicted RBP13.28□□□□□ -0.28
ITGB1-202ENST00000396033 UCHL3P15374 230 aa13.28□□□□□ -0.28
ITGB1-202ENST00000396033 GFPT1Q06210 699 aaPredicted RBP13.28□□□□□ -0.28
ITGB1-202ENST00000396033 STXBP2Q15833 593 aa13.28□□□□□ -0.28
ITGB1-202ENST00000396033 KLHDC7AQ5VTJ3 777 aa13.28□□□□□ -0.28
ITGB1-202ENST00000396033 DPY19L2Q6NUT2 758 aa13.28□□□□□ -0.28
ITGB1-202ENST00000396033 MOB2Q70IA6 237 aa13.28□□□□□ -0.28
ITGB1-202ENST00000396033 OTUD6AQ7L8S5 288 aa13.28□□□□□ -0.28
ITGB1-202ENST00000396033 PRRT2Q7Z6L0 340 aaPredicted RBP13.28□□□□□ -0.28
ITGB1-202ENST00000396033 ERO1BQ86YB8 467 aa13.28□□□□□ -0.28
ITGB1-202ENST00000396033 ANKRD13AQ8IZ07 590 aa13.28□□□□□ -0.28
ITGB1-202ENST00000396033 DNERQ8NFT8 737 aa13.28□□□□□ -0.28
ITGB1-202ENST00000396033 SPAG5Q96R06 1193 aa13.28□□□□□ -0.28
ITGB1-202ENST00000396033 PAGR1Q9BTK6 254 aa13.28□□□□□ -0.28
ITGB1-202ENST00000396033 FHOD1Q9Y613 1164 aa13.28□□□□□ -0.28
ITGB1-202ENST00000396033 SPATA31C2B4DYI2 1134 aa13.27□□□□□ -0.28
ITGB1-202ENST00000396033 DKC1O60832 514 aaKnown RBP eCLIP13.27□□□□□ -0.28
ITGB1-202ENST00000396033 SWSAP1Q6NVH7 229 aa13.27□□□□□ -0.28
ITGB1-202ENST00000396033 FBXO38Q6PIJ6 1188 aa13.27□□□□□ -0.28
ITGB1-202ENST00000396033 NCAPG2Q86XI2 1143 aa13.27□□□□□ -0.28
ITGB1-202ENST00000396033 RIOX2Q8IUF8 465 aa13.27□□□□□ -0.28
ITGB1-202ENST00000396033 SECISBP2LQ93073 1101 aaKnown RBP13.27□□□□□ -0.28
ITGB1-202ENST00000396033 CEP170P1Q96L14 293 aa13.27□□□□□ -0.28
ITGB1-202ENST00000396033 DUSP10Q9Y6W6 482 aa13.27□□□□□ -0.28
ITGB1-202ENST00000396033 DOCK5Q9H7D0 1870 aa13.27□□□□□ -0.29
ITGB1-202ENST00000396033 SLC16A4O15374 487 aa13.27□□□□□ -0.29
ITGB1-202ENST00000396033 ACTR2P61160 394 aa13.27□□□□□ -0.29
ITGB1-202ENST00000396033 ENOX2Q16206 610 aaKnown RBP13.27□□□□□ -0.29
ITGB1-202ENST00000396033 ASTE1Q2TB18 679 aaPredicted RBP13.27□□□□□ -0.29
ITGB1-202ENST00000396033 TEX35Q5T0J7 233 aa13.27□□□□□ -0.29
ITGB1-202ENST00000396033 HAUS6Q7Z4H7 955 aa13.27□□□□□ -0.29
ITGB1-202ENST00000396033 SLC9A9Q8IVB4 645 aa13.27□□□□□ -0.29
ITGB1-202ENST00000396033 SPATC1LQ9H0A9 340 aa13.27□□□□□ -0.29
ITGB1-202ENST00000396033 TELO2Q9Y4R8 837 aa13.27□□□□□ -0.29
ITGB1-202ENST00000396033 GTPBP10A4D1E9 387 aaKnown RBP13.27□□□□□ -0.29
ITGB1-202ENST00000396033 ZNF862O60290 1169 aa13.27□□□□□ -0.29
ITGB1-202ENST00000396033 MAGEA1P43355 309 aa13.27□□□□□ -0.29
ITGB1-202ENST00000396033 KLHL30Q0D2K2 578 aa13.27□□□□□ -0.29
ITGB1-202ENST00000396033 DPY19L2P1Q6NXN4 242 aa13.27□□□□□ -0.29
ITGB1-202ENST00000396033 USP50Q70EL3 339 aaPredicted RBP13.27□□□□□ -0.29
ITGB1-202ENST00000396033 AIPL1Q9NZN9 384 aa13.27□□□□□ -0.29
ITGB1-202ENST00000396033 TRIM49P0CI25 452 aa13.26□□□□□ -0.29
ITGB1-202ENST00000396033 TRIM49CP0CI26 452 aa13.26□□□□□ -0.29
ITGB1-202ENST00000396033 EPHX2P34913 555 aa13.26□□□□□ -0.29
ITGB1-202ENST00000396033 CCDC60Q8IWA6 550 aaPredicted RBP13.26□□□□□ -0.29
ITGB1-202ENST00000396033 CEP112Q8N8E3 955 aa13.26□□□□□ -0.29
ITGB1-202ENST00000396033 RDH13Q8NBN7 331 aa13.26□□□□□ -0.29
ITGB1-202ENST00000396033 GOLGA1Q92805 767 aa13.26□□□□□ -0.29
ITGB1-202ENST00000396033 PCIF1Q9H4Z3 704 aa13.26□□□□□ -0.29
ITGB1-202ENST00000396033 SEPT9Q9UHD8 586 aaPredicted RBP13.26□□□□□ -0.29
ITGB1-202ENST00000396033 PUF60Q9UHX1 559 aaKnown RBP13.26□□□□□ -0.29
ITGB1-202ENST00000396033 CCDC169A6NNP5 214 aa13.26□□□□□ -0.29
ITGB1-202ENST00000396033 TISP43B9A030 160 aa13.26□□□□□ -0.29
ITGB1-202ENST00000396033 ENC1O14682 589 aa13.26□□□□□ -0.29
ITGB1-202ENST00000396033 EIF3JO75822 258 aaKnown RBP13.26□□□□□ -0.29
ITGB1-202ENST00000396033 FMO5P49326 533 aa13.26□□□□□ -0.29
ITGB1-202ENST00000396033 ALDH5A1P51649 535 aaPredicted RBP13.26□□□□□ -0.29
ITGB1-202ENST00000396033 NCKAP1LP55160 1127 aa13.26□□□□□ -0.29
ITGB1-202ENST00000396033 GTF2BQ00403 316 aa13.26□□□□□ -0.29
ITGB1-202ENST00000396033 PRKCEQ02156 737 aa13.26□□□□□ -0.29
ITGB1-202ENST00000396033 DMP1Q13316 513 aaPredicted RBP13.26□□□□□ -0.29
ITGB1-202ENST00000396033 MYBPC2Q14324 1141 aa13.26□□□□□ -0.29
ITGB1-202ENST00000396033 PPP2R5AQ15172 486 aa13.26□□□□□ -0.29
ITGB1-202ENST00000396033 MIS18BP1Q6P0N0 1132 aa13.26□□□□□ -0.29
ITGB1-202ENST00000396033 SRGAP1Q7Z6B7 1085 aa13.26□□□□□ -0.29
ITGB1-202ENST00000396033 SLC17A8Q8NDX2 589 aa13.26□□□□□ -0.29
ITGB1-202ENST00000396033 SRCAPQ6ZRS2 3230 aa13.26□□□□□ -0.29
ITGB1-202ENST00000396033 SPDYE5A6NIY4 337 aa13.26□□□□□ -0.29
ITGB1-202ENST00000396033 CHMP4BP1P59074 171 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms